Literature DB >> 31853675

Genetic portrait of North-West Indian population based on X chromosome Alu insertion markers.

Gagandeep Singh1,2, Harkirat Singh Sandhu3, Yellapu Srinivas4, Kawaljit Matharoo5, A J S Bhanwer5.   

Abstract

In the present study, allele frequencies and forensic parameters of four ethnic groups (Brahmin, Khatri, Jat Sikh, and Scheduled Caste) of Punjab, India, at 10 Alu insertions of X chromosome were calculated. Six Alu markers were observed to be highly polymorphic with no significant deviations from Hardy-Weinberg equilibrium and no linkage disequilibrium present in any marker. Multidimensional plot showed higher genetic affinity of studied populations with Asian populations. Overall, the tested markers were reliable and were found suitable in human forensics and population genetic studies.

Entities:  

Keywords:  Alu insertions; Human forensics; Polymorphism; Population genetics; X chromosome

Mesh：

Year:  2019        PMID： 31853675     DOI： 10.1007/s00414-019-02238-3

Source DB:  PubMed          Journal:  Int J Legal Med        ISSN： 0937-9827            Impact factor:   2.686


  8 in total

1.  Inference of population structure using multilocus genotype data.

Authors:  J K Pritchard; M Stephens; P Donnelly
Journal:  Genetics       Date:  2000-06       Impact factor: 4.562

2.  Comprehensive analysis of Alu-associated diversity on the human sex chromosomes.

Authors:  Pauline A Callinan; Dale J Hedges; Abdel-Halim Salem; Jinchuan Xing; Jerilyn A Walker; Randall K Garber; W Scott Watkins; Michael J Bamshad; Lynn B Jorde; Mark A Batzer
Journal:  Gene       Date:  2003-10-23       Impact factor: 3.688

Review 3.  The X chromosome in population genetics.

Authors:  Stephen F Schaffner
Journal:  Nat Rev Genet       Date:  2004-01       Impact factor: 53.242

4.  A new Web site compiling forensic chromosome X research is now online.

Authors:  Reinhard Szibor; Sandra Hering; Jeanett Edelmann
Journal:  Int J Legal Med       Date:  2005-08-25       Impact factor: 2.686

5.  Genetic variation and population structure of five ethnic groups from Punjab, North-West India: Analysis of MHC class I polymorphic Alu insertions (POALINs).

Authors:  Gagandeep Singh; Harkirat Singh Sandhu; Rubina Sharma; Yellapu Srinivas; Kawaljit Matharoo; Manroop Singh; A J S Bhanwer
Journal:  Gene       Date:  2019-03-29       Impact factor: 3.688

6.  A simple salting out procedure for extracting DNA from human nucleated cells.

Authors:  S A Miller; D D Dykes; H F Polesky
Journal:  Nucleic Acids Res       Date:  1988-02-11       Impact factor: 16.971

7.  Genetic dissection of five ethnic groups from Punjab, North-West India-A study based on Autosomal Markers.

Authors:  Gagandeep Singh; Indu Talwar; Harkirat Singh Sandhu; Kawaljit Matharoo; A J S Bhanwer
Journal:  Leg Med (Tokyo)       Date:  2017-03-01       Impact factor: 1.376

8.  Analysis of ANKKI (rs1800497) and DRD2 (rs1079597, rs1800498) variants in five ethnic groups from Punjab, North-West India.

Authors:  Gagandeep Singh; Indu Talwar; Rubina Sharma; Harkirat Singh Sandhu; Kawaljit Matharoo; A J S Bhanwer
Journal:  Gene       Date:  2016-03-10       Impact factor: 3.688
  8 in total

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