Literature DB >> 31853405

Tumor tissue classification based on micro-hyperspectral technology and deep learning.

Bingliang Hu1,2, Jian Du1,2, Zhoufeng Zhang1,2, Quan Wang1,2.   

Abstract

In order to explore the application of hyperspectral technology in the pathological diagnosis of tumor tissue, we used microscopic hyperspectral imaging technology to establish a hyperspectral database of 30 patients with gastric cancer. Based on the difference in spectral-spatial features between gastric cancer tissue and normal tissue in the wavelength of 410-910 nm, we propose a deep-learning model-based analysis method for gastric cancer tissue. The microscopic hyperspectral feature and individual difference of gastric tissue, spatial-spectral joint feature and medical contact are studied. The experimental results show that the classification accuracy of proposed model for cancerous and normal gastric tissue is 97.57%, the sensitivity and specificity of gastric cancer tissue are 97.19% and 97.96% respectively. Compared with the shallow learning method, CNN can fully extract the deep spectral-spatial features of tumor tissue. The combination of deep learning model and micro-spectral analysis provides new ideas for the research of medical pathology.
© 2019 Optical Society of America under the terms of the OSA Open Access Publishing Agreement.

Entities:  

Year:  2019        PMID: 31853405      PMCID: PMC6913401          DOI: 10.1364/BOE.10.006370

Source DB:  PubMed          Journal:  Biomed Opt Express        ISSN: 2156-7085            Impact factor:   3.732


  8 in total

Review 1.  A hyperspectral imaging system for in vivo optical diagnostics. Hyperspectral imaging basic principles, instrumental systems, and applications of biomedical interest.

Authors:  Tuan Vo-Dinh; David L Stokes; Musundi B Wabuyele; Matt E Martin; Joon Myong Song; Ramesh Jagannathan; Edward Michaud; Robert J Lee; Xiaogang Pan
Journal:  IEEE Eng Med Biol Mag       Date:  2004 Sep-Oct

2.  Reducing the dimensionality of data with neural networks.

Authors:  G E Hinton; R R Salakhutdinov
Journal:  Science       Date:  2006-07-28       Impact factor: 47.728

3.  Identification of cancerous gastric cells based on common features extracted from hyperspectral microscopic images.

Authors:  Siqi Zhu; Kang Su; Yumeng Liu; Hao Yin; Zhen Li; Furong Huang; Zhenqiang Chen; Weidong Chen; Ge Zhang; Yihong Chen
Journal:  Biomed Opt Express       Date:  2015-03-04       Impact factor: 3.732

4.  Hyperspectral imaging and quantitative analysis for prostate cancer detection.

Authors:  Hamed Akbari; Luma V Halig; David M Schuster; Adeboye Osunkoya; Viraj Master; Peter T Nieh; Georgia Z Chen; Baowei Fei
Journal:  J Biomed Opt       Date:  2012-07       Impact factor: 3.170

5.  Hyperspectral imaging of mucosal surfaces in patients.

Authors:  Andreas O H Gerstner; Wiebke Laffers; Friedrich Bootz; Daniel L Farkas; Ron Martin; Jörg Bendix; Boris Thies
Journal:  J Biophotonics       Date:  2012-01-09       Impact factor: 3.207

6.  Detection of Cancer Metastasis Using a Novel Macroscopic Hyperspectral Method.

Authors:  Hamed Akbari; Luma V Halig; Hongzheng Zhang; Dongsheng Wang; Zhuo Georgia Chen; Baowei Fei
Journal:  Proc SPIE Int Soc Opt Eng       Date:  2012-03-23

7.  Cancer incidence and mortality worldwide: sources, methods and major patterns in GLOBOCAN 2012.

Authors:  Jacques Ferlay; Isabelle Soerjomataram; Rajesh Dikshit; Sultan Eser; Colin Mathers; Marise Rebelo; Donald Maxwell Parkin; David Forman; Freddie Bray
Journal:  Int J Cancer       Date:  2014-10-09       Impact factor: 7.396

8.  Using Fourier transform IR spectroscopy to analyze biological materials.

Authors:  Matthew J Baker; Júlio Trevisan; Paul Bassan; Rohit Bhargava; Holly J Butler; Konrad M Dorling; Peter R Fielden; Simon W Fogarty; Nigel J Fullwood; Kelly A Heys; Caryn Hughes; Peter Lasch; Pierre L Martin-Hirsch; Blessing Obinaju; Ganesh D Sockalingum; Josep Sulé-Suso; Rebecca J Strong; Michael J Walsh; Bayden R Wood; Peter Gardner; Francis L Martin
Journal:  Nat Protoc       Date:  2014-07-03       Impact factor: 13.491

  8 in total
  8 in total

1.  Spectral organ fingerprints for machine learning-based intraoperative tissue classification with hyperspectral imaging in a porcine model.

Authors:  Alexander Studier-Fischer; Silvia Seidlitz; Jan Sellner; Berkin Özdemir; Manuel Wiesenfarth; Leonardo Ayala; Jan Odenthal; Samuel Knödler; Karl Friedrich Kowalewski; Caelan Max Haney; Isabella Camplisson; Maximilian Dietrich; Karsten Schmidt; Gabriel Alexander Salg; Hannes Götz Kenngott; Tim Julian Adler; Nicholas Schreck; Annette Kopp-Schneider; Klaus Maier-Hein; Lena Maier-Hein; Beat Peter Müller-Stich; Felix Nickel
Journal:  Sci Rep       Date:  2022-06-30       Impact factor: 4.996

Review 2.  New Intraoperative Imaging Tools and Image-Guided Surgery in Gastric Cancer Surgery.

Authors:  Luise Knospe; Ines Gockel; Boris Jansen-Winkeln; René Thieme; Stefan Niebisch; Yusef Moulla; Sigmar Stelzner; Orestis Lyros; Michele Diana; Jacques Marescaux; Claire Chalopin; Hannes Köhler; Annekatrin Pfahl; Marianne Maktabi; Ji-Hyeon Park; Han-Kwang Yang
Journal:  Diagnostics (Basel)       Date:  2022-02-16

3.  Hyperspectral Imaging during Normothermic Machine Perfusion-A Functional Classification of Ex Vivo Kidneys Based on Convolutional Neural Networks.

Authors:  Florian Sommer; Bingrui Sun; Julian Fischer; Miriam Goldammer; Christine Thiele; Hagen Malberg; Wenke Markgraf
Journal:  Biomedicines       Date:  2022-02-07

4.  Tumor cell identification and classification in esophageal adenocarcinoma specimens by hyperspectral imaging.

Authors:  Marianne Maktabi; Yannis Wichmann; Hannes Köhler; Henning Ahle; Dietmar Lorenz; Michael Bange; Susanne Braun; Ines Gockel; Claire Chalopin; René Thieme
Journal:  Sci Rep       Date:  2022-03-16       Impact factor: 4.379

5.  Identification of gastric cancer with convolutional neural networks: a systematic review.

Authors:  Yuxue Zhao; Bo Hu; Ying Wang; Xiaomeng Yin; Yuanyuan Jiang; Xiuli Zhu
Journal:  Multimed Tools Appl       Date:  2022-02-18       Impact factor: 2.577

6.  A Multi-Task Convolutional Neural Network for Lesion Region Segmentation and Classification of Non-Small Cell Lung Carcinoma.

Authors:  Zhao Wang; Yuxin Xu; Linbo Tian; Qingjin Chi; Fengrong Zhao; Rongqi Xu; Guilei Jin; Yansong Liu; Junhui Zhen; Sasa Zhang
Journal:  Diagnostics (Basel)       Date:  2022-07-31

7.  Comparison of preprocessing techniques to reduce nontissue-related variations in hyperspectral reflectance imaging.

Authors:  Mark Witteveen; Hendricus J C M Sterenborg; Ton G van Leeuwen; Maurice C G Aalders; Theo J M Ruers; Anouk L Post
Journal:  J Biomed Opt       Date:  2022-10       Impact factor: 3.758

Review 8.  Surgical spectral imaging.

Authors:  Neil T Clancy; Geoffrey Jones; Lena Maier-Hein; Daniel S Elson; Danail Stoyanov
Journal:  Med Image Anal       Date:  2020-04-13       Impact factor: 8.545

  8 in total

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