Literature DB >> 31853385

Deep learning for quality assessment of retinal OCT images.

Jing Wang1,2,3, Guohua Deng4,3, Wanyue Li1,2, Yiwei Chen2, Feng Gao2, Hu Liu5,6, Yi He2,7, Guohua Shi2,8,9.   

Abstract

Optical coherence tomography (OCT) is a promising high-speed, non-invasive imaging modality providing high-resolution retinal scans. However, a variety of external factors such as light occlusion and patient movement can seriously degrade OCT image quality, which complicates manual retinopathy detection and computer-aided diagnosis. As such, this study first presents an OCT image quality assessment (OCT-IQA) system, capable of automatic classification based on signal completeness, location, and effectiveness. Four CNN architectures (VGG-16, Inception-V3, ResNet-18, and ResNet-50) from the ImageNet classification task were used to train the proposed OCT-IQA system via transfer learning. The ResNet-50 with the best performance was then integrated into the final OCT-IQA network. The usefulness of this approach was evaluated using retinopathy detection results. A retinopathy classification network was first trained by fine-tuning Inception-V3 model. The model was then applied to two test datasets, created randomly from the original dataset, one of which was screened by the OCT-IQA system and only included high quality images while the other was mixed by high and low quality images. Results showed that retinopathy detection accuracy and area under curve (AUC) were 3.75% and 1.56% higher, respectively, for the filtered data (compared with the unfiltered data). These experimental results demonstrate the effectiveness of the proposed OCT-IQA system and suggest that deep learning could be applied to the design of computer-aided systems (CADSs) for automatic retinopathy detection.
© 2019 Optical Society of America under the terms of the OSA Open Access Publishing Agreement.

Entities:  

Year:  2019        PMID: 31853385      PMCID: PMC6913385          DOI: 10.1364/BOE.10.006057

Source DB:  PubMed          Journal:  Biomed Opt Express        ISSN: 2156-7085            Impact factor:   3.732


  18 in total

1.  Signal quality assessment of retinal optical coherence tomography images.

Authors:  Yijun Huang; Sapna Gangaputra; Kristine E Lee; Ashwini R Narkar; Ronald Klein; Barbara E K Klein; Stacy M Meuer; Ronald P Danis
Journal:  Invest Ophthalmol Vis Sci       Date:  2012-04-24       Impact factor: 4.799

2.  Quantitative classification of eyes with and without intermediate age-related macular degeneration using optical coherence tomography.

Authors:  Sina Farsiu; Stephanie J Chiu; Rachelle V O'Connell; Francisco A Folgar; Eric Yuan; Joseph A Izatt; Cynthia A Toth
Journal:  Ophthalmology       Date:  2013-08-29       Impact factor: 12.079

Review 3.  Recent developments in optical coherence tomography for imaging the retina.

Authors:  Mirjam E J van Velthoven; Dirk J Faber; Frank D Verbraak; Ton G van Leeuwen; Marc D de Smet
Journal:  Prog Retin Eye Res       Date:  2006-12-08       Impact factor: 21.198

4.  A new quality assessment parameter for optical coherence tomography.

Authors:  D M Stein; H Ishikawa; R Hariprasad; G Wollstein; R J Noecker; J G Fujimoto; J S Schuman
Journal:  Br J Ophthalmol       Date:  2006-02       Impact factor: 4.638

5.  The ecosystem that powered the translation of OCT from fundamental research to clinical and commercial impact [Invited].

Authors:  Eric A Swanson; James G Fujimoto
Journal:  Biomed Opt Express       Date:  2017-02-21       Impact factor: 3.732

6.  Quality assessment for spectral domain optical coherence tomography (OCT) images.

Authors:  Shuang Liu; Amit S Paranjape; Badr Elmaanaoui; Jordan Dewelle; H Grady Rylander; Mia K Markey; Thomas E Milner
Journal:  Proc SPIE Int Soc Opt Eng       Date:  2009

7.  Dermatologist-level classification of skin cancer with deep neural networks.

Authors:  Andre Esteva; Brett Kuprel; Roberto A Novoa; Justin Ko; Susan M Swetter; Helen M Blau; Sebastian Thrun
Journal:  Nature       Date:  2017-01-25       Impact factor: 49.962

8.  Universal blind image quality assessment metrics via natural scene statistics and multiple kernel learning.

Authors:  Xinbo Gao; Fei Gao; Dacheng Tao; Xuelong Li
Journal:  IEEE Trans Neural Netw Learn Syst       Date:  2013-12       Impact factor: 10.451

9.  Automated Grading of Age-Related Macular Degeneration From Color Fundus Images Using Deep Convolutional Neural Networks.

Authors:  Philippe M Burlina; Neil Joshi; Michael Pekala; Katia D Pacheco; David E Freund; Neil M Bressler
Journal:  JAMA Ophthalmol       Date:  2017-11-01       Impact factor: 7.389

10.  Retinal layer segmentation of macular OCT images using boundary classification.

Authors:  Andrew Lang; Aaron Carass; Matthew Hauser; Elias S Sotirchos; Peter A Calabresi; Howard S Ying; Jerry L Prince
Journal:  Biomed Opt Express       Date:  2013-06-14       Impact factor: 3.732

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  8 in total

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Review 5.  Artificial Intelligence Approaches on X-ray-oriented Images Process for Early Detection of COVID-19.

Authors:  Sorayya Rezayi; Marjan Ghazisaeedi; Sharareh Rostam Niakan Kalhori; Soheila Saeedi
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6.  Automatic Anterior Chamber Angle Classification Using Deep Learning System and Anterior Segment Optical Coherence Tomography Images.

Authors:  Wanyue Li; Qian Chen; Chunhui Jiang; Guohua Shi; Guohua Deng; Xinghuai Sun
Journal:  Transl Vis Sci Technol       Date:  2021-05-03       Impact factor: 3.283

7.  Assessment of Generative Adversarial Networks Model for Synthetic Optical Coherence Tomography Images of Retinal Disorders.

Authors:  Ce Zheng; Xiaolin Xie; Kang Zhou; Bang Chen; Jili Chen; Haiyun Ye; Wen Li; Tong Qiao; Shenghua Gao; Jianlong Yang; Jiang Liu
Journal:  Transl Vis Sci Technol       Date:  2020-05-27       Impact factor: 3.283

8.  Multilevel Deep Feature Generation Framework for Automated Detection of Retinal Abnormalities Using OCT Images.

Authors:  Prabal Datta Barua; Wai Yee Chan; Sengul Dogan; Mehmet Baygin; Turker Tuncer; Edward J Ciaccio; Nazrul Islam; Kang Hao Cheong; Zakia Sultana Shahid; U Rajendra Acharya
Journal:  Entropy (Basel)       Date:  2021-12-08       Impact factor: 2.524

  8 in total

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