| Literature DB >> 31849325 |
Chao Han1, Kaiyan Cui1, Xiaojiao Bi1, Lina Wang1, Mengmeng Sun1, Limin Yang1, Lanfen Liu2.
Abstract
BACKGROUND: Schizophrenia is a complex psychiatric disorder with unknown etiology. A number of recent studies have shown that the polymorphism of the neural precursor cell expressed developmentally down-regulated 4 (NEDD4) gene is associated with a variety of neuropsychiatric disorders, such as schizophrenia, and may also be associated with cognitive dysfunction in these diseases.Entities:
Keywords: Cognitive dysfunction; NEDD4; Schizophrenia
Mesh:
Substances:
Year: 2019 PMID: 31849325 PMCID: PMC6918612 DOI: 10.1186/s12888-019-2386-y
Source DB: PubMed Journal: BMC Psychiatry ISSN: 1471-244X Impact factor: 3.630
The age and gender distributions of patients in case group and control group
| Group | Age (χ ± s) | Gender | ||
|---|---|---|---|---|
| Male | Female | |||
| Case group | 296 | 33.17 ± 10.99 | 108 | 188 |
| Control group | 320 | 32.48 ± 10.73 | 138 | 182 |
| t/χ2 | 0.002 | 2.825 | ||
| 0.430 | 0.093 | |||
Primers and probes sequences of SNPs
| SNP | Primer (5′-3′) | Probe (5′-3′) |
|---|---|---|
| rs3088077 | Forward: GGCTGTGTTGCTTGATAGATGTTT | Probe 1: FAM-TTCCAGACCAcGAGCCCCTAGTG--TAMRA |
| Reverse: GTCCCCAGCTGCAGACCTT | Probe 2: HEX-TTCCAGACCAtGAGCCCCTAGTGG-TAMRA | |
| rs11550869 | Forward: AAAGCACCTTCTGATTGTATAACACTTT | Probe 1: FAM-TCTGGAACTTCTGACAATCTGcCATGA-TAMRA |
| Reverse: TACTTAACCTCTCTGGATTCATATTTCTTC | Probe 2: HEX-TCTGGAACTTCTGACAATCTGgCATGA-TAMRA | |
| rs7162435 | Forward: TACTGCTTTGTGGATCTTTAATGTTTG | Probe 1: FAM-ACCAATGGTCAAtAGGATATGCAGGCA-TAMRA |
| Reverse: GCAATGGGTAAAAAGTATTAAAGCCT | Probe 2: HEX-TGGTCAAcAGGATATGCAGGCAAGA-TAMRA | |
| rs2303579 | Forward: TTACTTGACGGTGGAGGTGATG | Probe 1: FAM-AAGGCCTGGcTGC--MGB |
| Reverse: TAAGAGAAGATGAAGCCACCATGTA | Probe 2: HEX-AAGGCCTGGtTGCT-MGB | |
| rs62043855 | Forward: CAGATGTCCTATGCATGAGCTTAATAT | Probe 1: FAM-CTGAATCAGAATtAAG-MGB |
| Reverse: GTGATTGTAAACCAGAAATGTCAGAAA | Probe 2: HEX-CTGAATCAGAATgAAG-MGB |
Comparison of allele frequencies of five SNPs in the NEDD4 gene between case group and control group
| SNP | Allele | Case group | Control group | χ2/ |
|---|---|---|---|---|
| rs3088077 | C | 354 (0.598) | 451 (0.705) | 15.464/< 0.001* |
| T | 238 (0.402) | 189 (0.295) | ||
| rs2303579 | C | 324 (0.547) | 402 (0.628) | 8.301/0.004* |
| T | 268 (0.453) | 238 (0.372) | ||
| rs11550869 | G | 93 (0.157) | 89 (0.139) | 1.243/0.265 |
| C | 499 (0.843) | 571 (0.861) | ||
| rs7162435 | T | 413 (0.678) | 468 (0.731) | 1.706/0.192 |
| C | 179 (0.302) | 172 (0.269) | ||
| rs62043855 | T | 383 (0.647) | 432 (0.675) | 1.080/0.299 |
| G | 209 (0.353) | 208 (0.325) |
Notes: * P < 0.05
Comparison of genotype frequencies of five SNPs in the NEDD4 gene between case group and control group
| SNP | Genotype | Case group | Control group | χ2/ |
|---|---|---|---|---|
| rs3088077 | CC | 108 (0.365) | 164 (0.513) | 14.961/0.001* |
| TT | 50 (0.169) | 33 (0.103) | ||
| CT | 138 (0.466) | 123 (0.384) | ||
| rs2303579 | CC | 95 (0.321) | 129 (0.403) | 8.106/0.017* |
| TT | 67 (0.226) | 47 (0.147) | ||
| CT | 134 (0.453) | 144 (0.450) | ||
| rs11550869 | GG | 12 (0.041) | 10 (0.031) | 0.730/0.694 |
| CC | 215 (0.726) | 241 (0.753) | ||
| GC | 69 (0.233) | 69 (0.216) | ||
| rs7162435 | TT | 143 (0.483) | 171 (0.534) | 1.752/0.416 |
| CC | 26 (0.088) | 23 (0.072) | ||
| TC | 127 (0.429) | 126 (0.394) | ||
| rs62043855 | TT | 126 (0.426) | 148 (0.463) | 1.047/0.593 |
| GG | 39 (0.132) | 36 (0.112) | ||
| TG | 131 (0.442) | 136 (0.425) |
Notes: * P < 0.05
Comparison of MCCB subtest scores in patients with different genotypes of the rs2303579 locus
| Subtest | rs2303579 | F | ||||||
|---|---|---|---|---|---|---|---|---|
| CC ( | TT ( | CT ( | ||||||
| TMT-A | 48.02 ± 8.599 | 46.52 ± 18.220 | 46.09 ± 11.257 | 0.641 | 0.527 | 0.431 | 0.276 | 0.889 |
| BACS: Symbol Coding | 42.58 ± 10.389 | 42.82 ± 10.027 | 40.78 ± 10.012 | 1.408 | 0.246 | 0.850 | 0.172 | 0.157 |
| Fluency | 49.13 ± 9.905 | 47.75 ± 12.499 | 46.64 ± 11.583 | 1.414 | 0.245 | 0.467 | 0.094 | 0.470 |
| CPT-IP | 42.77 ± 10.616 | 42.58 ± 9.999 | 41.12 ± 11.657 | 0.845 | 0.431 | 0.947 | 0.243 | 0.333 |
| LNS | 46.91 ± 10.070 | 45.54 ± 10.140 | 45.22 ± 12.420 | 0.623 | 0.537 | 0.427 | 0.285 | 0.911 |
| WMS-III: Spatial Span | 45.83 ± 12.232 | 46.16 ± 11.764 | 42.46 ± 13.507 | 2.917 | 0.056 | 0.843 | 0.045* | 0.046* |
| HVLT-R | 44.20 ± 11.273 | 47.39 ± 10.113 | 43.28 ± 11.388 | 2.786 | 0.063 | 0.081 | 0.587 | 0.020* |
| BVMT-R | 43.83 ± 11.793 | 44.22 ± 12.007 | 42.49 ± 11.764 | 0.614 | 0.542 | 0.832 | 0.369 | 0.328 |
| NAB: Mazes | 43.88 ± 9.947 | 43.93 ± 10.458 | 41.82 ± 10.115 | 1.195 | 0.304 | 0.946 | 0.167 | 0.247 |
| MSCEIT: Managing Emotions | 48.33 ± 11.862 | 48.12 ± 12.957 | 47.60 ± 11.574 | 0.078 | 0.925 | 0.883 | 0.695 | 0.846 |
Notes: P1 value represented the statistical significance between patients with CC genotype and TT genotype. P2 value represented the statistical significance between patients with CC genotype and CT genotype. P3 value represented the statistical significance between patients with TT genotype and CT genotype. * P < 0.05
Comparison of MCCB subtest scores in patients with different genotypes of the rs62043855 locus
| Subtest | rs62043855 | F | ||||||
|---|---|---|---|---|---|---|---|---|
| TT( | GG( | TG( | ||||||
| TMT-A | 47.30 ± 8.989 | 47.49 ± 18.530 | 46.13 ± 13.206 | 0.706 | 0.494 | 0.822 | 0.243 | 0.561 |
| BACS: Symbol Coding | 42.59 ± 10.301 | 43.26 ± 9.332 | 40.66 ± 10.181 | 2.211 | 0.111 | 0.952 | 0.053 | 0.161 |
| Fluency | 48.60 ± 10.777 | 47.54 ± 11.480 | 46.85 ± 11.766 | 1.014 | 0.364 | 0.516 | 0.158 | 0.748 |
| CPT-IP | 42.23 ± 11.058 | 42.49 ± 9.965 | 41.59 ± 11.215 | 0.400 | 0.671 | 0.862 | 0.379 | 0.665 |
| LNS | 46.83 ± 9.858 | 45.28 ± 10.105 | 45.03 ± 12.634 | 1.962 | 0.142 | 0.230 | 0.058 | 0.922 |
| WMS-III: Spatial Span | 45.20 ± 12.497 | 45.54 ± 12.553 | 43.25 ± 13.172 | 0.949 | 0.388 | 0.908 | 0.215 | 0.330 |
| HVLT-R | 44.41 ± 11.462 | 47.03 ± 10.786 | 43.85 ± 10.941 | 1.246 | 0.289 | 0.305 | 0.453 | 0.120 |
| BVMT-R | 44.14 ± 12.068 | 45.21 ± 11.225 | 41.95 ± 11.671 | 1.669 | 0.190 | 0.621 | 0.144 | 0.131 |
| NAB: Mazes | 43.61 ± 10.299 | 45.44 ± 9.210 | 41.60 ± 10.162 | 2.723 | 0.067 | 0.370 | 0.092 | 0.03 |
| MSCEIT: Managing Emotions | 47.72 ± 11.473 | 48.26 ± 14.365 | 48.08 ± 11.717 | 0.013 | 0.987 | 0.880 | 0.909 | 0.942 |
Notes: P1 value represented the statistical significance between patients with TT genotype and GG genotype. P2 value represented the statistical significance between patients with TT genotype and TG genotype. P3 value represented the statistical significance between patients with GG genotype and TG genotype. * P < 0.05