Literature DB >> 31847761

Mass estimation of extinct taxa and phylogenetic hypotheses both influence analyses of character evolution in a large clade of birds (Telluraves).

Nicholas M A Crouch1, Roberta Mason-Gamer2.   

Abstract

Incorporating extinct taxa in phylogenetic comparative methods is rapidly becoming invaluable in studies of character evolution. An increasing number of studies have evaluated the effects of extinct taxa, and different numbers of extinct taxa, on model selection and parameter estimation. Body mass is a well-studied phenotype, but individual mass estimates may vary dramatically depending on the particular measurement used. Here, we perform an analysis of body mass evolution in a large clade of principally arboreal birds, incorporating 76 extinct species. We evaluate how different methods for estimating body mass of extinct taxa, and different phylogenetic hypotheses, affect our understanding of the rate and pattern of body mass evolution. Our results show that model selection can vary dramatically depending on the phenotypic and phylogenetic hypothesis used in the reconstruction. Even small changes in phenotype estimates can lead to different model selection and, as a result, affect the inferred evolutionary history. The best-fit models support an increase in the rate of evolution following the K-Pg boundary, with variation accumulating linearly through the Cenozoic. These results provide additional insight into the application of comparative models of evolution, as well as the evolutionary history of one of the most spectacular vertebrate radiations.

Entities:  

Keywords:  Brownian motion; allometric equations; macroevolution; phylogeny

Mesh:

Year:  2019        PMID: 31847761      PMCID: PMC6939909          DOI: 10.1098/rspb.2019.1745

Source DB:  PubMed          Journal:  Proc Biol Sci        ISSN: 0962-8452            Impact factor:   5.349


  26 in total

1.  Old World fossil record of modern-type hummingbirds.

Authors:  Gerald Mayr
Journal:  Science       Date:  2004-05-07       Impact factor: 47.728

2.  Extant-only comparative methods fail to recover the disparity preserved in the bird fossil record.

Authors:  Jonathan S Mitchell
Journal:  Evolution       Date:  2015-08-24       Impact factor: 3.694

3.  Body size evolution in Mesozoic birds: little evidence for Cope's rule.

Authors:  R J Butler; A Goswami
Journal:  J Evol Biol       Date:  2008-08-07       Impact factor: 2.411

4.  Why Do Phylogenomic Data Sets Yield Conflicting Trees? Data Type Influences the Avian Tree of Life more than Taxon Sampling.

Authors:  Sushma Reddy; Rebecca T Kimball; Akanksha Pandey; Peter A Hosner; Michael J Braun; Shannon J Hackett; Kin-Lan Han; John Harshman; Christopher J Huddleston; Sarah Kingston; Ben D Marks; Kathleen J Miglia; William S Moore; Frederick H Sheldon; Christopher C Witt; Tamaki Yuri; Edward L Braun
Journal:  Syst Biol       Date:  2017-09-01       Impact factor: 15.683

5.  The impact of phylogenetic dating method on interpreting trait evolution: a case study of Cretaceous-Palaeogene eutherian body-size evolution.

Authors:  T J D Halliday; A Goswami
Journal:  Biol Lett       Date:  2016-08       Impact factor: 3.703

6.  A basal dromaeosaurid and size evolution preceding avian flight.

Authors:  Alan H Turner; Diego Pol; Julia A Clarke; Gregory M Erickson; Mark A Norell
Journal:  Science       Date:  2007-09-07       Impact factor: 47.728

7.  The completeness of the fossil record of mesozoic birds: implications for early avian evolution.

Authors:  Neil Brocklehurst; Paul Upchurch; Philip D Mannion; Jingmai O'Connor
Journal:  PLoS One       Date:  2012-06-25       Impact factor: 3.240

8.  Skeletal correlates for body mass estimation in modern and fossil flying birds.

Authors:  Daniel J Field; Colton Lynner; Christian Brown; Simon A F Darroch
Journal:  PLoS One       Date:  2013-11-29       Impact factor: 3.240

9.  Whole-genome analyses resolve early branches in the tree of life of modern birds.

Authors:  Erich D Jarvis; Siavash Mirarab; Andre J Aberer; Bo Li; Peter Houde; Cai Li; Simon Y W Ho; Brant C Faircloth; Benoit Nabholz; Jason T Howard; Alexander Suh; Claudia C Weber; Rute R da Fonseca; Jianwen Li; Fang Zhang; Hui Li; Long Zhou; Nitish Narula; Liang Liu; Ganesh Ganapathy; Bastien Boussau; Md Shamsuzzoha Bayzid; Volodymyr Zavidovych; Sankar Subramanian; Toni Gabaldón; Salvador Capella-Gutiérrez; Jaime Huerta-Cepas; Bhanu Rekepalli; Kasper Munch; Mikkel Schierup; Bent Lindow; Wesley C Warren; David Ray; Richard E Green; Michael W Bruford; Xiangjiang Zhan; Andrew Dixon; Shengbin Li; Ning Li; Yinhua Huang; Elizabeth P Derryberry; Mads Frost Bertelsen; Frederick H Sheldon; Robb T Brumfield; Claudio V Mello; Peter V Lovell; Morgan Wirthlin; Maria Paula Cruz Schneider; Francisco Prosdocimi; José Alfredo Samaniego; Amhed Missael Vargas Velazquez; Alonzo Alfaro-Núñez; Paula F Campos; Bent Petersen; Thomas Sicheritz-Ponten; An Pas; Tom Bailey; Paul Scofield; Michael Bunce; David M Lambert; Qi Zhou; Polina Perelman; Amy C Driskell; Beth Shapiro; Zijun Xiong; Yongli Zeng; Shiping Liu; Zhenyu Li; Binghang Liu; Kui Wu; Jin Xiao; Xiong Yinqi; Qiuemei Zheng; Yong Zhang; Huanming Yang; Jian Wang; Linnea Smeds; Frank E Rheindt; Michael Braun; Jon Fjeldsa; Ludovic Orlando; F Keith Barker; Knud Andreas Jønsson; Warren Johnson; Klaus-Peter Koepfli; Stephen O'Brien; David Haussler; Oliver A Ryder; Carsten Rahbek; Eske Willerslev; Gary R Graves; Travis C Glenn; John McCormack; Dave Burt; Hans Ellegren; Per Alström; Scott V Edwards; Alexandros Stamatakis; David P Mindell; Joel Cracraft; Edward L Braun; Tandy Warnow; Wang Jun; M Thomas P Gilbert; Guojie Zhang
Journal:  Science       Date:  2014-12-12       Impact factor: 47.728

10.  Rates of dinosaur body mass evolution indicate 170 million years of sustained ecological innovation on the avian stem lineage.

Authors:  Roger B J Benson; Nicolás E Campione; Matthew T Carrano; Philip D Mannion; Corwin Sullivan; Paul Upchurch; David C Evans
Journal:  PLoS Biol       Date:  2014-05-06       Impact factor: 8.029

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