| Literature DB >> 31835621 |
Pradeep Paudel1, Se Eun Park1, Su Hui Seong1, Hyun Ah Jung2, Jae Sue Choi1.
Abstract
In this study, we delineate the human monoamine oxidase (hMAO) inhibitory potential of natural Diels-Alder type adducts, mulberrofuran G (1), kuwanon G (2), and albanol B (3), from Morus alba root bark to characterize their role in Parkinson's disease (PD) and depression, focusing on their ability to modulate dopaminergic receptors (D1R, D2LR, D3R, and D4R). In hMAO-A inhibition, 1-3 showed mild effects (50% inhibitory concentration (IC50): 54‒114 μM). However, 1 displayed moderate inhibition of the hMAO-B isozyme (IC50: 18.14 ± 1.06 μM) followed by mild inhibition by 2 (IC50: 57.71 ± 2.12 μM) and 3 (IC50: 90.59 ± 1.72 μM). Our kinetic study characterized the inhibition mode, and the in silico docking predicted that the moderate inhibitor 1 would have the lowest binding energy. Similarly, cell-based G protein-coupled receptors (GPCR) functional assays in vector-transfected cells expressing dopamine (DA) receptors characterized 1-3 as D1R/D2LR antagonists and D3R/D4R agonists. The half-maximum effective concentration (EC50) of 1-3 on DA D3R/D4R was 15.13/17.19, 20.18/21.05, and 12.63/‒ µM, respectively. Similarly, 1-3 inhibited 50% of the DA response on D1R/D2LR by 6.13/2.41, 16.48/31.22, and 7.16/18.42 µM, respectively. A computational study revealed low binding energy for the test ligands. Interactions with residues Asp110, Val111, Tyr365, and Phe345 at the D3R receptor and Asp115 and His414 at the D4R receptor explain the high agonist effect. Likewise, Asp187 at D1R and Asp114 at D2LR play a crucial role in the antagonist effects of the ligand binding. Our overall results depict 1-3 from M. alba root bark as good inhibitors of hMAO and potent modulators of DA function as D1R/D2LR antagonists and D3R/D4R agonists. These active constituents in M. alba deserve in-depth study for their potential to manage neurodegenerative disorders (NDs), particularly PD and psychosis.Entities:
Keywords: GPCRs; Morus alba L.; Parkinson’s disease; dopamine; human monoamine oxidase
Mesh:
Substances:
Year: 2019 PMID: 31835621 PMCID: PMC6940761 DOI: 10.3390/ijms20246232
Source DB: PubMed Journal: Int J Mol Sci ISSN: 1422-0067 Impact factor: 5.923
Figure 1Activity of monoamine oxidase (MAO) enzyme in neuronal cells.
Figure 2Structures of compounds isolated from Morus alba.
Human monoamine oxidase (hMAO) inhibitory potential of compounds from Morus alba.
| Compounds | Human Monoamine Oxidase A ( | ||
|---|---|---|---|
| IC50 (μM, Mean ± SD) a | Inhibition Type c | ||
|
| 54.79 ± 0.03 | 26.96 ± 3.98 | Competitive |
|
| 70.16 ± 2.60 | 28.29 ± 2.02 | Competitive |
|
| 114.31 ± 2.30 | 46.93 ± 4.12 | Competitive |
| Selegiline d | 12.51 ± 1.11 |
|
|
| Harmine d, e | 0.006 [ |
|
|
|
| |||
|
| 18.14 ± 1.06 | 17.01 ± 3.31 | Noncompetitive |
|
| 57.71 ± 2.12 | 52.09 ± 5.56 | Noncompetitive |
|
| 90.59 ± 1.72 | 55.19 ± 7.79 f/186.2 ± 10.26 g | Mixed |
| Selegiline d | 0.30 ± 0.01 |
|
|
| Safinamide d,e | 0.00512 [ |
|
|
NT: Not tested. a The 50% inhibitory concentration (IC50) values (μM) were calculated from a log dose-inhibition curve and expressed as the mean ± SD of triplicate experiments. b The hMAO inhibition constant (Ki) was determined using a Dixon plot. c The hMAO inhibition type was determined using Lineweaver–Burk plots and Dixon plots. d Reference inhibitor. e Values extracted from the literature. f, g Kic and Kiu values, respectively.
Figure 3Dixon plot (a‒c) and Lineweaver–Burk plot (d‒f) of hMAO-A inhibition by compounds 1–3, respectively.
Figure 4Dixon plot (a‒c) and Lineweaver–Burk plot (d‒f) of hMAO-B inhibition by compounds 1–3, respectively.
Binding site residues and docking scores of 1–3 and reference inhibitors in human monoamine oxidase A (hMAO-A) (2BXR) obtained using Autodock 4.2.
| Compound | Binding Energy (kcal/mol) a | H-bond Interacting Residues b | Hydrophobic Interacting Residues b | Electrostatic Interacting Residues b |
|---|---|---|---|---|
|
| −9.54 | Gly110, Thr336, Ile207, Gly214, Ser209 | Val210 (Pi-Sigma, Pi-Alkyl), Ile325 (Pi-Sigma), Phe208 (Pi-Pi Stacked, Pi-Pi T-Shaped), Ile358 (Alkyl), Leu337 (Alkyl), Ile335 (Alkyl), Met350 (Alkyl), Val93 (Pi-Alkyl), | - |
|
| −6.74 | Met300, Leu298, Asp359, Gly404, Cys398, Trp397, Glu400 | Ala302 (Pi-Alkyl, Alkyl) | - |
|
| −8.62 | Gln296, Ile295, Gly404, Tyr410, Met300, Thr183, Ser184 | Pro299, Ala279, Ala302 (Pi-Alkyl) | Glu188 (Pi-Anion) |
| Selegiline | −6.54 | - | Ile335 (Pi-Sigma), Leu337 (Pi-Alkyl), FAD600 (Pi-Alkyl), Tyr407 (Pi-Alkyl), Tyr444 (Pi-Alkyl) | - |
| HRM c(Harmine) | −6.46 | FAD600 | Tyr444 (Pi-Sigma), FAD600 (Pi-Sigma, Pi-Pi T-shaped, Pi-Alkyl), Tyr444 (Pi-Pi Stacked), Phe352 (Pi-Pi T-shaped), Tyr407 (Pi-Alkyl), Ile335 (Pi-Alkyl) | - |
a Estimated binding free energy of the ligand–receptor complex. b The number of hydrogen bonds and all amino acid residues from the enzyme–inhibitor complex was determined with the AutoDock 4.2 program. c 7-Methoxy-1-methyl-9H-pyrido [3,4-b]indole.
Binding site residues and docking scores of 1–3 and reference inhibitors in human monoamine oxidase B (hMAO-B) (2BYB) obtained using Autodock 4.2.
| Compound | Binding Energy (kcal/mol) a | H-bond Interacting Residues b | Hydrophobic Interacting Residues b | Electrostatic Interacting Residues b |
|---|---|---|---|---|
|
| −11.09 | His115, Pro476, Glu483 | Phe103 (Pi-Pi Stacked, Pi-Pi T-shaped, Pi-Alkyl), Val106 (Pi-Alkyl), Ile477 (Pi-Alkyl) | Glu483(Pi-Anion) |
|
| −12.65 | Pro104, Asn116, Glu483, Phe103, Thr478 | Tyr112 (Pi-Sigma), Phe103 (Pi-Pi Stacked), Val106 (Alkyl, Pi-Alkyl), Pro102 (Alkyl, Pi-Alkyl), Tyr112 (Pi-Alkyl), Trp119 (Pi-Alkyl), Pro104 (Pi-Alkyl), Leu164 (Pi-Alkyl) | Glu483(Pi-Anion) |
|
| −10.05 | Thr195, Pro104, Asn116, Thr478, Gly193 | Ile477 (Pi-Sigma), Trp119 (Pi-Pi Stacked), Phe103 (Pi-Pi T-shaped), Thr195 (Amide-Pi Stacked), Gly194 (Amide-Pi Stacked), Arg120 (Alkyl, Pi-Alkyl), Val106 (Pi-Alkyl) | Asp123(Pi-Anion), Glu483(Pi-Anion) |
| Selegiline c | −7.06 | Ile198 | Tyr398 (Pi-Pi Stacked), Tyr435 (Pi-Pi Stacked), FAD600 (Pi-Pi T-shaped), Leu171 (Alkyl), Cys172 (Alkyl), Phe188 (Pi-Alkyl) | - |
| Safinamide c | −9.86 | Cys172, Ile199, Tyr326, Thr201 | Leu171 (Pi-Sigma, Pi-Alkyl), Tyr398 (Pi-Pi Stacked), Tyr326 (Pi-Pi T-shaped), Ile199 (Pi-Alkyl) | - |
a Estimated binding free energy of the ligand–receptor complex. b The number of hydrogen bonds and all amino acid residues from the enzyme–inhibitor complex were determined with the AutoDock 4.2 program. c Reference inhibitors.
Figure 5(a) hMAO-A inhibition mode of 1–3 and selegiline. (b–d) 2D ligand interaction diagram of hMAO-A inhibition by 1–3, respectively.
Figure 6(a) hMAO-B inhibition mode of 1–3 and selegiline. (b–d) 2D ligand interaction diagram of hMAO-B inhibition by 1–3, respectively.
Figure 7(a) hMAO-A and (b) hMAO-B inhibition mode of selegiline with flavin adenine dinucleotide (FAD). (c,d) 2D ligand interaction diagram of hMAO-A and hMAO-B inhibition by selegiline.
Efficacy values (% stimulation and % inhibition) of Diels–Alder type adducts (1–3) from M. alba on DA (D1, D2L, D3, and D4) receptors.
| Receptors | 1 | 2 | 3 | Reference Drugs |
|---|---|---|---|---|
| % Stimulation a | % Stimulation a | % Stimulation a | EC50
c | |
| D1 (h) | 17.2 ± 8.4 | 0.85 ± 0.24 | 28 | |
| D2L (h) | 7.10 ± 1.47 | 4.10 ± 1.06 | 12 | |
| D3 (h) | 119.9 ± 2.44 | 124.3 ± 0.76 | 102.8 ± 1.36 | 4.1 |
| D4 (h) | 86.30 ± 0.99 | 90.45 ± 0.14 | 46.10 ± 1.76 | 21 |
a, b % Stimulation and % inhibition, respectively, of control agonist response at 100 µM of test compounds. c EC50 (nM) values of standard agonist DA. d IC50 (nM) values of standard antagonists (D1: SCH-23390, D2L: butaclamol, D3: (+)-butaclamol, D4: clozapine. INTER: Test compound interfered with the assay detection method. NSI: Test compound interfered nonspecifically in the assay.
Figure 8Concentration-dependent % of control agonist response on human dopamine D3 receptor (hD3R) (a) and human dopamine D4 receptor (hD4R) (b), and % inhibition of control agonist response on human dopamine D1 receptor (hD1R) (c) and hD2LR (d) of test compounds 1–3.
Figure 9(a–c) Molecular docking simulation of 1–3 with human dopamine D1 receptor (hD1R). (d–f) 2D diagram of the ligand binding sites.
Figure 10(a–c) Molecular docking simulation of 1–3 with human dopamine D2L receptor (hD2LR). (d–f) 2D diagram of the ligand-binding sites.
Figure 11(a–c) Molecular docking simulation of 1–3 with human dopamine D3 receptor (hD3R). (d–f) 2D diagram of the ligand-binding sites.
Figure 12(a–c) Molecular docking simulation of 1–3 with human dopamine D4 receptor (hD4R). (d–f) 2D diagram of the ligand-binding sites.
Binding sites and docking scores of compounds on hD1R.
| Target | Compounds | Binding Energy (kcal/mol) | H-bond Interaction Residues | Hydrophobic Interacting Residues | Electrostatic Interacting Residues |
|---|---|---|---|---|---|
| Dopamine a | −5.59 | Asp103 (Salt bridge), Ser202, Asn292, Ser199 | Phe289 (Pi-Pi T-shaped), Ile104 (Pi-Alkyl) | Phe288(Pi-Cation) | |
| SCH23390 a | − 6.94 | Asp103 (Salt bridge), Ser199, Ser202 | Leu190 (Pi-sigma), Phe288 (Pi-Pi T-shaped), Ile104 (Pi-Alkyl), Ala195 (Pi-Alkyl) | - | |
|
| −9.22 | Lys81, Leu291, Asp314, Ser188 | Leu295 (Pi-sigma), Phe313 (Pi-Pi Stacked), Phe306 (Pi-Pi T-shaped), Ser188 (Amide-Pi Stacked), Leu295 (Pi-Alkyl), Leu291 (Pi-Alkyl) | Lys81(Pi-Cation), Asp314(Pi-Anion) | |
|
| −7.1 | Lys81, Ser107, Ser202, Asp187, Asp103, Ser198 | Val100 (Pi-sigma), Val317 (Pi-Sigma, Pi-Alkyl), Phe313 (Pi-Pi T-shaped), Leu190 (Alkyl), Cys186 (Alkyl), Phe288 (Pi-Alkyl), Ile104 (Pi-Alkyl) | Asp187 (Pi-Anion) | |
|
| −9.2 | Asp187, Ser188 | Asp187 (Pi-Sigma). Leu295 (Pi-Sigma, Pi-Alkyl), Phe30 6 (Pi-Pi T-shaped), Pro171 (Pi-Alkyl), Arg192 (Pi-Alkyl), Ala195 (Pi-Alkyl) | - |
a Reference ligand for hD1R.
Binding sites and docking scores of compounds on hD2LR.
| Target | Compounds | Binding Energy (kcal/mol) | H-bond Interaction Residues | Hydrophobic Interacting Residues | Electrostatic Interacting Residues |
|---|---|---|---|---|---|
| Dopamine a | −6.98 | Asp114 (Salt bridge), Tyr416, Thr119 | Trp386 (Pi-Pi T-shaped), Val115 (Pi-Alkyl) | - | |
| Risperidone a | −12.7 | Asp114 (salt bridge), Thr119 | Trp100 (Pi-Pi T-shaped, Pi-Alkyl), Trp386 (Pi-Pi T-shaped), Val91(Alkyl), Leu94 (Alkyl), Val115 (Alkyl, Pi-Alkyl), Val111 (Alkyl), Ile184 (Alkyl), Phe110 (Pi-Alkyl), Phe389 (Pi-Alkyl), Cys118 (Pi-Alkyl), Ala122 (Pi-Alkyl) | - | |
| Butaclamol a | −6.9 | Asp114 (Salt bridge), Ser193 | Phe389 (Pi-Pi Stacked, Pi-Pi T-shaped, Pi-Alkyl), Tyr416 (Pi-Pi Stacked), Cys118 (Alkyl), Phe198 (Pi-Alkyl), Trp386 (Pi-Alkyl), Phe390 (Pi-Alkyl) | - | |
|
| −8.11 | Ser197, Asp114, Thr412, | Thr412 (Pi-Sigma), Phe110 (Pi-Sigma), | Asp114 (Pi-Anion) | |
|
| −8.23 | Asn396, Tyr408, Ile184 | Tyr408 (Pi-Pi Stacked), Tyr100 (Pi-Pi T-shaped), Phe389 (Pi-Alkyl), Tyr416 (Pi-Alkyl), Ile184 (Pi-Alkyl), Val190 (Pi-Alkyl) | - | |
|
| −10.45 | Trp100, Cys118, Ser193, Asp114 | Ile184 (Pi-Sigma, Alkyl), Trp100 (Pi-Pi T-shaped), Trp386 (Pi-Pi T-shaped), Val190 (Alkyl), Phe189 (Pi-Alkyl), Val115 (Pi-Alkyl) | Asp114 (Pi-Anion) |
a Reference ligand for hD2LR.
Binding sites and docking scores of compounds on hD3R.
| Target | Compounds | Binding Energy (kcal/mol) | H-bond Interaction Residues | Hydrophobic Interacting Residues | Electrostatic Interacting Residues |
|---|---|---|---|---|---|
| Dopamine a | −5.72 | Asp110 (Salt bridge), Tyr373, Val111, Thr115, Ser196 | Val111 (Pi-Alkyl), Cys114 (Pi-Alkyl) | ||
| Eticlopride a | −9.22 | Asp110 (Salt bridge), Tyr373 | Phe345 (Pi-Pi T-shaped), Ile183 (Alkyl, Pi-Alkyl), Val189 (Alkyl), VAl111 (Pi-Alkyl) | ||
| (+)-butaclamol a | −10.69 | Asp110(Salt bridge) | Val111 (Alkyl), Cys114 (Alkyl), Trp342 (Pi-Alkyl), Phe345 (Pi-Alkyl), Phe346 (Pi-Alkyl), Val86 (Pi-Alkyl) | ||
|
| −5.89 | Tyr365, Cys181, Ser366, Thr369 | Ile183 (Pi-Sigma), Phe345 (Pi-Pi T-shaped), His349 (Pi-Pi T-shaped), Tyr365 (Pi-Pi T-shaped), Val86 (Alkyl, Pi-Alkyl), Leu89 (Alkyl), Phe106 (PI-Alkyl), Val107 (Pi-Alkyl), Val111 (Pi-Alkyl) | Asp110 (Pi-Anion) | |
|
| −7.45 | Tyr365, Thr369, Cys181, | Thr369 (Pi-Sigma), Phe345(Pi-Pi Stacked, Pi-Alkyl), Phe106 (Pi-Pi T-shaped), Tyr365 (Pi-Pi T-shaped), Val86 (Alkyl), Leu89 (Alkyl), Phe346 (Pi-Alkyl), Val107 (PI-Alkyl) | Asp110 (Pi-Anion), | |
|
| −10.41 | Ile183, Val110, Thr115 | Leu89 (Pi-Sigma), Thr359 (Pi-Sigma), Phe345 (Pi-Pi Stacked), Tyr365 (PI-Pi T-shaped), Val86 (Alkyl, Pi-Alkyl), Tyr36 (Pi-Alkyl), Val111 (Pi-Alkyl), Cys114 (Pi-Alkyl), | Asp110 (Pi-Anion) |
a Reference ligand for hD3R.
Binding sites and docking scores of compounds on hD4R.
| Target | Compounds | Binding Energy (kcal/mol) | H-bond Interaction Residues | Hydrophobic Interacting Residues | Electrostatic Interacting Residues |
|---|---|---|---|---|---|
| Dopamine a | −6.1 | Asp115(Salt bridge), Thr120, Ser196, Tyr438 | Cys119(Pi-Alkyl), Val116(Pi-Alkyl), Phe411(Pi-Pi T-shaped) | ||
| Nemonapride a | −13.08 | Asp115(Salt bridge), Tyr438, Ser196 | Val116 (Pi-Sigma), Phe91 (Pi-Pi T-shaped), Phe410 (Pi-Pi T-shaped), Leu90 (Amide-Pi Stacked), Val193 (Alkyl), Leu111 (Pi-Alkyl) | ||
| Clozapine a | −10.14 | Asp115(Salt bridge) | Leu187(Pi-Sigma), Phe410(Pi-PI T-shaped), His414(Pi-Pi T-shaped), Val116(Alkyl, Pi-Alkyl), Val193(Pi-Alkyl) | ||
|
| −9.67 | Ser196, Leu187, Val430, Thr434 | Val116 (Pi-Sigma, Pi-Alkyl), Leu187 (Pi-Sigma), Thr434 (Pi-Sigma), Phe411 (Pi-Pi T-shaped), His414 (PI-Pi T-shaped), Phe410 (Pi-Pi T-shaped), Met112 (Alkyl), Cys185 (Alkyl), Cys119 (Alkyl, Pi-Alkyl), Arg186 (Pi-Alkyl) | Asp115 (Pi-Anion) | |
|
| −10.34 | Ser197, Thr434, Asp115, Tyr438 | Val193 (Pi-sigma), His414 (Pi-Pi Stacked, Pi-Pi T-shaped), Met112 (Alkyl), Leu187 (Alkyl, Pi-Alkyl), Phe91 (Pi-Alkyl), Arg186 (Pi-Alkyl),Val116 (Pi-Alkyl) | Asp115 (Pi-Anion) | |
|
| −12.42 | Leu187, Asp115, Ser196 | Leu187 (Pi-Sigma, Alkyl, Pi-Alkyl), Phe410 (Pi-Pi T-shaped), His414 (Pi-Pi T-shaped, Pi-Alkyl), Val193 (Alkyl, Pi-Alkyl), Val116 (Pi-Alkyl) | Asp115 (Pi-Anion) |
a Reference ligand for hD4R.