Literature DB >> 31834372

Soil characteristics and land-use drive bacterial community assembly patterns.

Samuel E Barnett1, Nicholas D Youngblut1,2, Daniel H Buckley1.   

Abstract

Land-use and soil characteristics drive variation in soil community composition, but the influences of these factors on dispersal and community assembly at regional scale remain poorly characterized. Land-use remains a consistent driver of soil community composition even when exhibiting patchy spatial distribution at regional scale. In addition, disturbed and early successional soils often exhibit stochastic community assembly patterns. These observations suggest local community composition is influenced by dispersal and assembly from regional species pools. We examined bacterial community assembly within agricultural cropland, old-field, and forested sites across 10 landscapes in the region around Ithaca, New York (USA). We found that the Sloan neutral model explained assembly well at regional scale (R2 = 0.763), but that both soil pH and land-use imposed selection that shaped community composition. We show that homogeneous selection was a dominant assembly process with respect to both soil pH and land-use regime, but that these two factors interacted in their effects on bacterial community assembly. We conclude that bacterial community assembly at a regional scale is driven by dispersal from regional species pools and local selection on the basis of soil pH and other soil characteristics that vary with land-use. © FEMS 2019.

Keywords:  agriculture; bacteria; community assembly; land management; pH; soil

Year:  2020        PMID: 31834372     DOI: 10.1093/femsec/fiz194

Source DB:  PubMed          Journal:  FEMS Microbiol Ecol        ISSN: 0168-6496            Impact factor:   4.194


  6 in total

1.  Community Organization and Metagenomics of Bacterial Assemblages Across Local Scale pH Gradients in Northern Forest Soils.

Authors:  Joseph B Yavitt; C Armanda Roco; Spencer J Debenport; Samuel E Barnett; James P Shapleigh
Journal:  Microb Ecol       Date:  2020-10-01       Impact factor: 4.552

2.  Multisubstrate DNA stable isotope probing reveals guild structure of bacteria that mediate soil carbon cycling.

Authors:  Samuel E Barnett; Nicholas D Youngblut; Chantal N Koechli; Daniel H Buckley
Journal:  Proc Natl Acad Sci U S A       Date:  2021-11-23       Impact factor: 11.205

3.  Distinct and Temporally Stable Assembly Mechanisms Shape Bacterial and Fungal Communities in Vineyard Soils.

Authors:  Stefano Larsen; Davide Albanese; James Stegen; Pietro Franceschi; E Coller; Roberto Zanzotti; Claudio Ioriatti; Erika Stefani; Massimo Pindo; Alessandro Cestaro; Claudio Donati
Journal:  Microb Ecol       Date:  2022-07-14       Impact factor: 4.192

4.  Soil acidification mediates changes in soil bacterial community assembly processes in response to agricultural intensification.

Authors:  Xingang Zhou; Muhammad Khashi U Rahman; Junjie Liu; Fengzhi Wu
Journal:  Environ Microbiol       Date:  2021-07-28       Impact factor: 5.476

5.  Distinct bacterial community structure and composition along different cowpea producing ecoregions in Northeastern Brazil.

Authors:  Luciana de Sousa Lopes; Lucas William Mendes; Jadson Emanuel Lopes Antunes; Louise Melo de Souza Oliveira; Vania Maria Maciel Melo; Arthur Prudêncio de Araujo Pereira; Antonio Félix da Costa; José de Paula Oliveira; Cosme Rafael Martínez; Marcia do Vale Barreto Figueiredo; Ademir Sérgio Ferreira Araujo
Journal:  Sci Rep       Date:  2021-01-12       Impact factor: 4.379

6.  Unexpected diversity among small-scale sample replicates of defined plant root compartments.

Authors:  Sally Attia; Jakob Russel; Martin S Mortensen; Jonas S Madsen; Søren J Sørensen
Journal:  ISME J       Date:  2021-11-10       Impact factor: 10.302

  6 in total

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