Literature DB >> 31831581

SNPs identified by GWAS affect asthma risk through DNA methylation and expression of cis-genes in airway epithelium.

Soyeon Kim1,2,3, Erick Forno1,2,3, Qi Yan1,2, Yale Jiang1,4, Rong Zhang5, Nadia Boutaoui1,2, Edna Acosta-Pérez6, Glorisa Canino6, Wei Chen1,2,7, Juan C Celedón8,2,7.   

Abstract

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Year:  2020        PMID: 31831581      PMCID: PMC8932401          DOI: 10.1183/13993003.02079-2019

Source DB:  PubMed          Journal:  Eur Respir J        ISSN: 0903-1936            Impact factor:   16.671


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  15 in total

1.  Genome-wide association study and admixture mapping identify different asthma-associated loci in Latinos: the Genes-environments & Admixture in Latino Americans study.

Authors:  Joshua M Galanter; Christopher R Gignoux; Dara G Torgerson; Lindsey A Roth; Celeste Eng; Sam S Oh; Elizabeth A Nguyen; Katherine A Drake; Scott Huntsman; Donglei Hu; Saunak Sen; Adam Davis; Harold J Farber; Pedro C Avila; Emerita Brigino-Buenaventura; Michael A LeNoir; Kelley Meade; Denise Serebrisky; Luisa N Borrell; William Rodríguez-Cintrón; Andres Moreno Estrada; Karla Sandoval Mendoza; Cheryl A Winkler; William Klitz; Isabelle Romieu; Stephanie J London; Frank Gilliland; Fernando Martinez; Carlos Bustamante; L Keoki Williams; Rajesh Kumar; José R Rodríguez-Santana; Esteban G Burchard
Journal:  J Allergy Clin Immunol       Date:  2014-01-07       Impact factor: 10.793

2.  DNA methylation in nasal epithelium, atopy, and atopic asthma in children: a genome-wide study.

Authors:  Erick Forno; Ting Wang; Cancan Qi; Qi Yan; Cheng-Jian Xu; Nadia Boutaoui; Yueh-Ying Han; Daniel E Weeks; Yale Jiang; Franziska Rosser; Judith M Vonk; Sharon Brouwer; Edna Acosta-Perez; Angel Colón-Semidey; María Alvarez; Glorisa Canino; Gerard H Koppelman; Wei Chen; Juan C Celedón
Journal:  Lancet Respir Med       Date:  2018-12-21       Impact factor: 30.700

3.  DNA methylation profiles between airway epithelium and proxy tissues in children.

Authors:  Rossa Brugha; Robert Lowe; A John Henderson; John W Holloway; Vardhman Rakyan; Eva Wozniak; Nadiya Mahmud; Kay Seymour; Jonathan Grigg; Seif O Shaheen
Journal:  Acta Paediatr       Date:  2017-09-18       Impact factor: 2.299

4.  A meta-analysis of genome-wide association studies of asthma in Puerto Ricans.

Authors:  Qi Yan; John Brehm; Maria Pino-Yanes; Erick Forno; Jerome Lin; Sam S Oh; Edna Acosta-Perez; Cathy C Laurie; Michelle M Cloutier; Benjamin A Raby; Adrienne M Stilp; Tamar Sofer; Donglei Hu; Scott Huntsman; Celeste S Eng; Matthew P Conomos; Deepa Rastogi; Kenneth Rice; Glorisa Canino; Wei Chen; R Graham Barr; Esteban G Burchard; Juan C Celedón
Journal:  Eur Respir J       Date:  2017-05-01       Impact factor: 16.671

Review 5.  A complex role for complement in allergic asthma.

Authors:  Xun Zhang; Jörg Köhl
Journal:  Expert Rev Clin Immunol       Date:  2010-03       Impact factor: 4.473

6.  Association of HLA class II alleles with childhood asthma and Total IgE levels.

Authors:  Masoud Movahedi; Mostafa Moin; Mohammad Gharagozlou; Asghar Aghamohammadi; Saied Dianat; Batoul Moradi; Mohammad Hossein Nicknam; Behrouz Nikbin; Aliakbar Amirzargar
Journal:  Iran J Allergy Asthma Immunol       Date:  2008-12       Impact factor: 1.464

7.  Multiancestry association study identifies new asthma risk loci that colocalize with immune-cell enhancer marks.

Authors:  Florence Demenais; Patricia Margaritte-Jeannin; Kathleen C Barnes; William O C Cookson; Janine Altmüller; Wei Ang; R Graham Barr; Terri H Beaty; Allan B Becker; John Beilby; Hans Bisgaard; Unnur Steina Bjornsdottir; Eugene Bleecker; Klaus Bønnelykke; Dorret I Boomsma; Emmanuelle Bouzigon; Christopher E Brightling; Myriam Brossard; Guy G Brusselle; Esteban Burchard; Kristin M Burkart; Andrew Bush; Moira Chan-Yeung; Kian Fan Chung; Alexessander Couto Alves; John A Curtin; Adnan Custovic; Denise Daley; Johan C de Jongste; Blanca E Del-Rio-Navarro; Kathleen M Donohue; Liesbeth Duijts; Celeste Eng; Johan G Eriksson; Martin Farrall; Yuliya Fedorova; Bjarke Feenstra; Manuel A Ferreira; Maxim B Freidin; Zofia Gajdos; Jim Gauderman; Ulrike Gehring; Frank Geller; Jon Genuneit; Sina A Gharib; Frank Gilliland; Raquel Granell; Penelope E Graves; Daniel F Gudbjartsson; Tari Haahtela; Susan R Heckbert; Dick Heederik; Joachim Heinrich; Markku Heliövaara; John Henderson; Blanca E Himes; Hiroshi Hirose; Joel N Hirschhorn; Albert Hofman; Patrick Holt; Jouke Hottenga; Thomas J Hudson; Jennie Hui; Medea Imboden; Vladimir Ivanov; Vincent W V Jaddoe; Alan James; Christer Janson; Marjo-Riitta Jarvelin; Deborah Jarvis; Graham Jones; Ingileif Jonsdottir; Pekka Jousilahti; Michael Kabesch; Mika Kähönen; David B Kantor; Alexandra S Karunas; Elza Khusnutdinova; Gerard H Koppelman; Anita L Kozyrskyj; Eskil Kreiner; Michiaki Kubo; Rajesh Kumar; Ashish Kumar; Mikko Kuokkanen; Lies Lahousse; Tarja Laitinen; Catherine Laprise; Mark Lathrop; Susanne Lau; Young-Ae Lee; Terho Lehtimäki; Sébastien Letort; Albert M Levin; Guo Li; Liming Liang; Laura R Loehr; Stephanie J London; Daan W Loth; Ani Manichaikul; Ingo Marenholz; Fernando J Martinez; Melanie C Matheson; Rasika A Mathias; Kenji Matsumoto; Hamdi Mbarek; Wendy L McArdle; Mads Melbye; Erik Melén; Deborah Meyers; Sven Michel; Hamida Mohamdi; Arthur W Musk; Rachel A Myers; Maartje A E Nieuwenhuis; Emiko Noguchi; George T O'Connor; Ludmila M Ogorodova; Cameron D Palmer; Aarno Palotie; Julie E Park; Craig E Pennell; Göran Pershagen; Alexey Polonikov; Dirkje S Postma; Nicole Probst-Hensch; Valery P Puzyrev; Benjamin A Raby; Olli T Raitakari; Adaikalavan Ramasamy; Stephen S Rich; Colin F Robertson; Isabelle Romieu; Muhammad T Salam; Veikko Salomaa; Vivi Schlünssen; Robert Scott; Polina A Selivanova; Torben Sigsgaard; Angela Simpson; Valérie Siroux; Lewis J Smith; Maria Solodilova; Marie Standl; Kari Stefansson; David P Strachan; Bruno H Stricker; Atsushi Takahashi; Philip J Thompson; Gudmar Thorleifsson; Unnur Thorsteinsdottir; Carla M T Tiesler; Dara G Torgerson; Tatsuhiko Tsunoda; André G Uitterlinden; Ralf J P van der Valk; Amaury Vaysse; Sailaja Vedantam; Andrea von Berg; Erika von Mutius; Judith M Vonk; Johannes Waage; Nick J Wareham; Scott T Weiss; Wendy B White; Magnus Wickman; Elisabeth Widén; Gonneke Willemsen; L Keoki Williams; Inge M Wouters; James J Yang; Jing Hua Zhao; Miriam F Moffatt; Carole Ober; Dan L Nicolae
Journal:  Nat Genet       Date:  2017-12-22       Impact factor: 38.330

8.  Multiethnic meta-analysis identifies ancestry-specific and cross-ancestry loci for pulmonary function.

Authors:  Annah B Wyss; Tamar Sofer; Mi Kyeong Lee; Natalie Terzikhan; Jennifer N Nguyen; Lies Lahousse; Jeanne C Latourelle; Albert Vernon Smith; Traci M Bartz; Mary F Feitosa; Wei Gao; Tarunveer S Ahluwalia; Wenbo Tang; Christopher Oldmeadow; Qing Duan; Kim de Jong; Mary K Wojczynski; Xin-Qun Wang; Raymond Noordam; Fernando Pires Hartwig; Victoria E Jackson; Tianyuan Wang; Ma'en Obeidat; Brian D Hobbs; Tianxiao Huan; Hongsheng Gui; Margaret M Parker; Donglei Hu; Lauren S Mogil; Gleb Kichaev; Jianping Jin; Mariaelisa Graff; Tamara B Harris; Ravi Kalhan; Susan R Heckbert; Lavinia Paternoster; Kristin M Burkart; Yongmei Liu; Elizabeth G Holliday; James G Wilson; Judith M Vonk; Jason L Sanders; R Graham Barr; Renée de Mutsert; Ana Maria Baptista Menezes; Hieab H H Adams; Maarten van den Berge; Roby Joehanes; Albert M Levin; Jennifer Liberto; Lenore J Launer; Alanna C Morrison; Colleen M Sitlani; Juan C Celedón; Stephen B Kritchevsky; Rodney J Scott; Kaare Christensen; Jerome I Rotter; Tobias N Bonten; Fernando César Wehrmeister; Yohan Bossé; Shujie Xiao; Sam Oh; Nora Franceschini; Jennifer A Brody; Robert C Kaplan; Kurt Lohman; Mark McEvoy; Michael A Province; Frits R Rosendaal; Kent D Taylor; David C Nickle; L Keoki Williams; Esteban G Burchard; Heather E Wheeler; Don D Sin; Vilmundur Gudnason; Kari E North; Myriam Fornage; Bruce M Psaty; Richard H Myers; George O'Connor; Torben Hansen; Cathy C Laurie; Patricia A Cassano; Joohon Sung; Woo Jin Kim; John R Attia; Leslie Lange; H Marike Boezen; Bharat Thyagarajan; Stephen S Rich; Dennis O Mook-Kanamori; Bernardo Lessa Horta; André G Uitterlinden; Hae Kyung Im; Michael H Cho; Guy G Brusselle; Sina A Gharib; Josée Dupuis; Ani Manichaikul; Stephanie J London
Journal:  Nat Commun       Date:  2018-07-30       Impact factor: 14.919

9.  Moderate-to-severe asthma in individuals of European ancestry: a genome-wide association study.

Authors:  Nick Shrine; Michael A Portelli; Catherine John; María Soler Artigas; Neil Bennett; Robert Hall; Jon Lewis; Amanda P Henry; Charlotte K Billington; Azaz Ahmad; Richard J Packer; Dominick Shaw; Zara E K Pogson; Andrew Fogarty; Tricia M McKeever; Amisha Singapuri; Liam G Heaney; Adel H Mansur; Rekha Chaudhuri; Neil C Thomson; John W Holloway; Gabrielle A Lockett; Peter H Howarth; Ratko Djukanovic; Jenny Hankinson; Robert Niven; Angela Simpson; Kian Fan Chung; Peter J Sterk; John D Blakey; Ian M Adcock; Sile Hu; Yike Guo; Maen Obeidat; Don D Sin; Maarten van den Berge; David C Nickle; Yohan Bossé; Martin D Tobin; Ian P Hall; Christopher E Brightling; Louise V Wain; Ian Sayers
Journal:  Lancet Respir Med       Date:  2018-12-11       Impact factor: 30.700

10.  The NHGRI-EBI GWAS Catalog of published genome-wide association studies, targeted arrays and summary statistics 2019.

Authors:  Annalisa Buniello; Jacqueline A L MacArthur; Maria Cerezo; Laura W Harris; James Hayhurst; Cinzia Malangone; Aoife McMahon; Joannella Morales; Edward Mountjoy; Elliot Sollis; Daniel Suveges; Olga Vrousgou; Patricia L Whetzel; Ridwan Amode; Jose A Guillen; Harpreet S Riat; Stephen J Trevanion; Peggy Hall; Heather Junkins; Paul Flicek; Tony Burdett; Lucia A Hindorff; Fiona Cunningham; Helen Parkinson
Journal:  Nucleic Acids Res       Date:  2019-01-08       Impact factor: 16.971

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  7 in total

1.  Expression Quantitative Trait Methylation Analysis Reveals Methylomic Associations With Gene Expression in Childhood Asthma.

Authors:  Soyeon Kim; Erick Forno; Rong Zhang; Hyun Jung Park; Zhongli Xu; Qi Yan; Nadia Boutaoui; Edna Acosta-Pérez; Glorisa Canino; Wei Chen; Juan C Celedón
Journal:  Chest       Date:  2020-06-20       Impact factor: 9.410

Review 2.  A review of epigenetic changes in asthma: methylation and acetylation.

Authors:  Mojgan Sheikhpour; Mobina Maleki; Maryam Ebrahimi Vargoorani; Vahid Amiri
Journal:  Clin Epigenetics       Date:  2021-03-29       Impact factor: 6.551

Review 3.  The Airway Epithelium-A Central Player in Asthma Pathogenesis.

Authors:  Jenny Calvén; Elisabeth Ax; Madeleine Rådinger
Journal:  Int J Mol Sci       Date:  2020-11-24       Impact factor: 5.923

4.  Multi-omics colocalization with genome-wide association studies reveals a context-specific genetic mechanism at a childhood onset asthma risk locus.

Authors:  Marcus M Soliai; Atsushi Kato; Britney A Helling; Catherine T Stanhope; James E Norton; Katherine A Naughton; Aiko I Klinger; Emma E Thompson; Selene M Clay; Soyeon Kim; Juan C Celedón; James E Gern; Daniel J Jackson; Matthew C Altman; Robert C Kern; Bruce K Tan; Robert P Schleimer; Dan L Nicolae; Jayant M Pinto; Carole Ober
Journal:  Genome Med       Date:  2021-10-10       Impact factor: 11.117

5.  Identification of tissue-specific and common methylation quantitative trait loci in healthy individuals using MAGAR.

Authors:  Michael Scherer; Gilles Gasparoni; Souad Rahmouni; Tatiana Shashkova; Marion Arnoux; Edouard Louis; Arina Nostaeva; Diana Avalos; Emmanouil T Dermitzakis; Yurii S Aulchenko; Thomas Lengauer; Paul A Lyons; Michel Georges; Jörn Walter
Journal:  Epigenetics Chromatin       Date:  2021-09-16       Impact factor: 4.954

6.  Interweaving Between Genetic and Epigenetic Studies on Childhood Asthma.

Authors:  Aniruddha Rathod; Jiasong Duan; Hongmei Zhang; John W Holloway; Susan Ewart; S Hasan Arshad; Wilfried Karmaus
Journal:  Epigenet Insights       Date:  2020-07-22

Review 7.  Epithelial cell dysfunction, a major driver of asthma development.

Authors:  Irene H Heijink; Virinchi N S Kuchibhotla; Mirjam P Roffel; Tania Maes; Darryl A Knight; Ian Sayers; Martijn C Nawijn
Journal:  Allergy       Date:  2020-06-16       Impact factor: 13.146

  7 in total

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