| Literature DB >> 31830898 |
Konstantin Divilov1, Blaine Schoolfield2, Benjamin Morga3, Lionel Dégremont3, Colleen A Burge4, Daniel Mancilla Cortez5, Carolyn S Friedman6, Gary B Fleener5, Brett R Dumbauld7, Chris Langdon2.
Abstract
BACKGROUND: Variants of the Ostreid herpesvirus 1 (OsHV-1) cause high losses of Pacific oysters globally, including in Tomales Bay, California, USA. A suite of new variants, the OsHV-1 microvariants (μvars), cause very high mortalities of Pacific oysters in major oyster-growing regions outside of the United States. There are currently no known Pacific oysters in the United States that are resistant to OsHV-1 as resistance has yet to be evaluated in these oysters. As part of an effort to begin genetic selection for resistance to OsHV-1, 71 families from the Molluscan Broodstock Program, a US West Coast Pacific oyster breeding program, were screened for survival after exposure to OsHV-1 in Tomales Bay. They were also tested in a quarantine laboratory in France where they were exposed to a French OsHV-1 microvariant using a plate assay, with survival recorded from three to seven days post-infection.Entities:
Keywords: Breeding; Crassostrea gigas; Heritability; Ostreid herpesvirus 1
Mesh:
Year: 2019 PMID: 31830898 PMCID: PMC6909534 DOI: 10.1186/s12863-019-0791-3
Source DB: PubMed Journal: BMC Genet ISSN: 1471-2156 Impact factor: 2.797
Fig. 1a Mean cumulative percent survival of 69 MBP families, one hybrid family, two French selected resistant families, one French selected susceptible family, and two French unselected families from day three post-infection with the French OsHV-1 variant (C-25) to day seven in a plate assay in France with two replications. Distributions of the mean cumulative percent survival are shown on the right-hand side. b Distribution of the mean percent survival of 66 MBP families replicated four times after a significant OsHV-1 (C-89) mortality event in Tomales Bay, California with the mean percent survival of one hybrid family, two naturalized Willapa families, and one commercial family shown by dashed vertical lines
Fig. 2a Logarithm-transformed means and standard errors of OsHV-1 variant DNA concentration measured using qPCR over time from pooled spat (n = 3 pools, 5 spat per pool) in the plate assay for five random MBP families, two French selected resistant families, and one French selected susceptible family. No viral copies were detected at the start of the experiment (not shown due to log transformation). At day six, the OsHV-1 DNA concentrations (untransformed scale) of the French selected resistant families and the MBP families, which were not significantly different from each other (p > 0.05), were significantly less (p < 0.05) than the French selected susceptible family. At day seven, the MBP families had a significantly greater OsHV-1 DNA concentration than the French selected resistant families while the French selected susceptible family had an OsHV-1 DNA concentration that was not significantly different than either of the two other groups of families. No other within-day group comparisons were statistically significant in the untransformed scale. b Logarithm-transformed OsHV-1 DNA concentration distributions for live (n = 26) and dead (n = 22) random MBP oysters that were sampled on 1 August 2018 from Tomales Bay and tested positive for OsHV-1 by qPCR. Five live oysters tested negative for OsHV-1 (not shown due to log transformation) and one dead oyster has no amplifiable DNA. Logarithm-transformed means of live (OsHV-1 negative and positive) and dead oysters are shown by dashed vertical lines
Posterior modes (95% highest posterior density intervals in parentheses) of Bayesian Gaussian process regression model parameters estimated from the MBP families for the plate assay (PA) across days post-infection and the Tomales Bay field trial (TB). The parameters are the genetic () and error () variances. Heritability (h2) is a statistic calculated from the variances
| Phenotype | h2 | ||
|---|---|---|---|
| PA Day 3 | 15.76 (3.42–34.56) | 33.13 (24.59–45.76) | 0.57 (0.22–0.74) |
| PA Day 4 | 81.61 (39.99–141.44) | 88.12 (65.03–127.46) | 0.68 (0.46–0.80) |
| PA Day 5 | 160.46 (82.36–266.01) | 162.29 (116.53–226.35) | 0.69 (0.49–0.81) |
| PA Day 6 | 225.05 (97.14–406.81) | 292.37 (205.81–409.70) | 0.63 (0.40–0.79) |
| PA Day 7 | 229.34 (100.40–415.37) | 282.49 (205.72–410.45) | 0.65 (0.41–0.79) |
| TB | 79.31 (31.41–160.97) | 318.01 (272.47–388.68) | 0.53 (0.31–0.70) |
Pearson correlation coefficients (95% confidence intervals in parentheses) between breeding values of phenotypes for the plate assay (PA) across days post-infection and the Tomales Bay field trial (TB)
| PA Day 3 | PA Day 4 | PA Day 5 | PA Day 6 | PA Day 7 | TB | |
|---|---|---|---|---|---|---|
| PA Day 3 | 1 | 0.74 (0.61–0.83) | 0.67 (0.51–0.78) | 0.66 (0.51–0.78) | 0.59 (0.41–0.72) | 0.24 (0.01–0.45) |
| PA Day 4 | 1 | 0.93 (0.88–0.95) | 0.86 (0.78–0.91) | 0.79 (0.69–0.87) | 0.2 (−0.04–0.41) | |
| PA Day 5 | 1 | 0.90 (0.85–0.94) | 0.84 (0.75–0.90) | 0.17 (−0.06–0.39) | ||
| PA Day 6 | 1 | 0.95 (0.92–0.97) | 0.17 (−0.06–0.39) | |||
| PA Day 7 | 1 | 0.24 (0.01–0.45) | ||||
| TB | 1 |
Fig. 3Maximum, mean, and minimum daily seawater temperatures at the Tomales Bay planting site from the day after planting to the day before phenotyping the oysters for survival against the OsHV-1 mortality event plotted as raw values (points) and smoothed lines. Spat were planted on 23 May 2018 and OsHV-1 survival was phenotyped on 1 August 2018
Fig. 4Breeding values (BVs) of MBP families for survival to the French OsHV-1 μvar (C-25) in the plate assay seven days post-infection and to the Tomales Bay OsHV-1 variant (C-89) in the field trial with the line of best fit