Literature DB >> 31828190

Cytokine secretion in breast cancer cells - MILLIPLEX assay data.

Karin Chen1, Leo Satlof1,2, Guillaume Stoffels2, Udithi Kothapalli1,2, Noah Ziluck1,2, Maribel Lema1,3, Leonid Poretsky1,2,3, Dimiter Avtanski1,2,3.   

Abstract

Metastatic breast cancer is the most advanced stage of breast cancer and the leading cause of breast cancer mortality. Although understanding of the cancer progression and metastasis process has improved, the bi-directional communication between the tumor cell and the tumor microenvironment is still not well understood. Breast cancer cells are highly secretory, and their secretory activity is modulated by a variety of inflammatory stimuli present in the tumor microenvironment. Here, we characterized the cytokine expression in human breast cancer cells (MDA-MB-231, MCF-7, T-47D, and BT-474) in vitro using 41 cytokine MILLIPLEX assay. Further, we compared cytokine expression in breast cancer cells to those in non-tumorigenic human breast epithelial MCF-10A cells.
© 2019 The Author(s).

Entities:  

Keywords:  Breast cancer; Cytokine; Inflammation; Tumor microenvironment

Year:  2019        PMID: 31828190      PMCID: PMC6889457          DOI: 10.1016/j.dib.2019.104798

Source DB:  PubMed          Journal:  Data Brief        ISSN: 2352-3409


Specifications Table Breast cancer cells are highly secretory cells producing variety of cytokines and other molecules that can modulate or are modulated by the tumor microenvironment. Inflammation mediates the initiation and progression of breast cancer, including directly affecting secretory activity of the cancer cells. Understanding the bi-directional communication between tumor microenvironment and the cancer cells can lead to the development of novel therapies for breast cancer.

Data

Basal cytokine secretion in human breast cancer and non-tumorigenic breast epithelial cells

To evaluate basal cytokine secretion in breast cancer cells, we selected four different human breast cancer cell lines (MDA-MB-231, MCF-7, T-47D, and BT-474) possessing various molecular characteristics and metastatic potential. We also selected non-tumorigenic human breast epithelial MCF-10A cell line for comparison. The characteristics of each cell line used are listed in Table 1. We maintained the cells in serum-free medium for 24 and 48 hours and measured the levels of 41 cytokines (listed in Table 2) secreted in the medium using MILLIPLEX assay. The data from the assay are listed in Table 3. Further, we compared the level of each cytokine secreted from each breast cancer cell line relative to the secretion from MCF-10A cells (Table 4).
Table 1

Categorization and molecular characteristics of the cell lines used.

Cell LineERPRHER2BRCA1SubtypeTumor
MCF-10AWTBN/A
MDA-MB-231WTTNBAC
MCF-7++WTLAIDC
T-47D++WTLAIDC
BT-474+++WTLBIDC

[1,2] ER, estrogen receptor; PR, progesterone receptor; HER2, human epidermal growth factor receptor 2; BRCA1, breast cancer gene 1; WT, wild type; TNB, triple-negative B; B, basal; LA, luminal A; LB, luminal B; AC, adenocarcinoma; IDC, invasive lobular carcinoma.

Table 2

List of cytokines measured by MILLIPLEX assay.

AbbreviationFull nameSynonyms
TNFαTumor Necrosis Factor AlphaTNF-α, TNF-alpha, TNFA, TNF, TNFSF2, TNLG1F, DIF
TNFβTumor Necrosis Factor BetaTNF-β, TNF-beta, TNFB, TNFSF1, LT, TNLG1E, Lymphotoxin-α, Lymphotoxin Alpha, LTA
IFN-α2Interferon Alpha 2IFNA, IFNA2, IFNA2B, IFN-alphaA, INDA2
IFN-γInterferon gammaIFNγ, IFNgamma, IFN-gamma, IFN-g, IFI, TCRalpha
CCL2Chemokine (C–C Motif) Ligand 2MCP-1, MCP1, GDCF-2, HC11, HSMCR30, MCAF, SCYA2, SMC-CF
CCL3Chemokine (C–C Motif) Ligand 3MIP-1α, MIP-1-alpha, MIP1A, SCYA3, G0S19-1, LD78ALPHA
CCL4Chemokine (C–C Motif) Ligand 4MIP-1β. MIP-1-beta, MIP1B, MIP1B1, SCYA2, SCYA4, ACT2, AT744.1, G-26, HC21, LAG-1, LAG1
CCL5Chemokine (C–C Motif) Ligand 5RANTES, eoCP, SCYA5, TCP228, D17S136E, SIS-delta, SISd
CCL7Chemokine (C–C Motif) Ligand 7CCL7, MCP-3, MCP3, FIC, MARC, NC28, SCYA6, SCYA7
CCL11C–C Motif Chemokine Ligand 2Eotaxin-1, HC11, MCAF, MCP1, MCP-1, SCYA2, GDCF-2, SMC-CF, HSMCR30
CCL22C–C Motif Chemokine 22MDC, ABCD-1, SCYA22, STCP-1, DC/B-CK, A-152E5.1
CXCL1C-X-C Motif Chemokine Ligand 1Groucho, GRO, GRO1, GROA, GROa, MGSA, MGSA-alpha, MGSA-A, MGSA-a, NAP-3, SCYB1, FSP
CXCL10C-X-C Motif Chemokine Ligand 10IP-10, INP10, IFI10, SCYB10, gIP-10, C7, crg-2, mob-1
CX3CL1Chemokine (C-X3-C Motif) Ligand 1Fractalkine, Neurotactin, ABCD-3, C3Xkine, CXC3, CXC3C, NTN, NTT, SCYD1
IL-1αInterleukin 1 AlphaIL1α, IL-1alpha, IL1alpha, IL1-ALPHA, IL-1A, IL1A, IL1, Hematopoietin 1
IL-1βInterleukin 1 BetaIL1-beta, IL1beta, IL1-BETA, IL-1, IL1, IL1F2
IL-2Interleukin 2IL2, TCGF, Lymphokine
IL-3Interleukin 3IL3, MCGF, MULTI-CSF
IL-4Interleukin 4IL4, BCGF-1, BCGF1, BSF-1, BSF1
IL-5Interleukin 5IL5, EDF, TRF
IL-6Interleukin 6IL6, CDF, HGF, HSF, BSF-2, BSF2, IFNB2, IFN-beta-2
IL-7Interleukin 7IL7
IL-8Interleukin 8IL8, CXCL8, NAF, GCP-1, GCP1, LECT, LUCT, NAP-1, NAP1, GCP-1, LYNAP, MDNCF, MONAP
IL-9Interleukin 9IL9, HP40, P40
IL-10Interleukin 10IL10, IL10A, CSIF, GVHDS, TGIF
IL-12p40Interleukin 12 Subunit p40IL12B, IL-12B, CLMF, CLMF2, IMD28, IMD29, NKSF, NKSF2
IL-12p70Interleukin 12 p70 (active heterodimer)
IL-13Interleukin 13IL13, P600
IL-15Interleukin 15IL15
IL-17AInterleukin 17AIL17A, IL-17, IL17, CTLA-8, CTLA8
IL-1RAInterleukin 1 Receptor AntagonistIL1RA, IL-1ra, IL-1ra3, IL1RN, IL-1RN, IL1F3, ICIL-1RA, MVCD4, DIRA, IRAP
G-CSFGranulocyte Colony-Stimulating FactorGCSF, CSF3, CSF3OS, C17orf33
GM-CSFGranulocyte-Macrophage Colony-Stimulating FactorCSF2, CSF
FLT3LFMS-Like Tyrosine Kinase 3 LigandFL, FLG3L, FLT3LG
sCD40LSoluble Cluster of Differentiation 40 Ligand
EGFEpidermal Growth FactorHOMG4, URG
FGF-2Fibroblast Growth Factor 2FGF2, FGFB, BFGF, HBGF-2
TGFαTransforming Growth Factor AlphaTGFA
PDGF-AAPlatelet-Derived Growth Factor AA Homodimer
PDGF-AB/BBPlatelet-Derived Growth Factor AB/BB Homodimers
VEGF-AVascular Endothelial Growth Factor AVEGFA, VEGF, VPF, MVCD1
Table 3

Basal cytokine secretion in breast cancer cell lines.

Cytokine24h
48h
MCF-10AMDA-MB-231MCF-7T-47DBT-474MCF-10AMDA-MB-231MCF-7T-47DBT-474
TNFα<2.9507.275 (±0.179)<2.56045.895 (±11.591)15.328 (±0.434)4.103 (±0.109)14.935 (±0.546)<2.56033.630 (±9.101)13.898 (±2.355)
TNFβ<2.485<2.493<2.260<2.348<2.260<2.735<3.620<2.260<2.398<2.398
IFN-α2<5.088<13.510<4.845<7.805<8.313<7.425<13.278<4.97012.123 (±3.010)14.998 (±2.485)
IFN-γ3.843 (±0.414)8.290 (±0.655)<1.8604.948 (±0.463)<1.8753.328 (±0.292)7.790 (±0.533)<1.8605.848 (±1.211)<3.865
CCL2829.865 (±58.989)1069.333 (±47.394)<3.0203337.000 (±373.176)270.170 (±4.571)1665.750 (±100.659)2197.500 (±90.143)<3.2282739.750 (±683.225)616.520 (±146.576)
CCL3<7.93010.745 (±0.345)<7.930<7.930<7.930<7.93021.803 (±0.770)<7.930<7.930<7.930
CCL44.370 (±0.167)7.793 (±0.231)<2.89043.030 (±8.784)3.985 (±0.170)5.028 (±0.153)12.783 (±0.106)<2.89026.075 (±5.572)4.735 (±0.747)
CCL58.970 (±0.143)102.598 (±1.836)5.545 (±0.236)232.223 (±19.932)154.808 (±1.343)15.265 (±0.452)180.860 (±5.135)6.910 (±0.678)226.218 (±38.228)370.975 (±81.655)
CCL712.333 (±0.661)12.373 (±0.856)<3.18810.858 (±1.531)4.708 (±0.336)13.038 (±0.279)14.145 (±1.080)<3.1888.675 (±1.097)6.263 (±1.233)
CCL119.215 (±0.193)9.470 (±0.254)<2.9903.845 (±0.245)4.183 (±0.353)9.515 (±0.325)10.098 (±0.232)<2.990<3.9154.118 (±0.210)
CCL229.205 (±1.055)12.430 (±0.430)8.713 (±0.541)12.753 (±1.462)17.815 (±1.015)10.213 (±0.642)14.900 (±1.402)10.345 (±0.179)10.750 (±1.686)68.720 (±21.248)
CXCL18732.750 (±605.110)4522.000 (±156.844)4.068 (±0.408)456.633 (±121.228)387.795 (±9.656)7983.750 (±551.861)10,511.000 (±762.600)<3.688249.928 (±70.653)1451.665 (±413.137)
CXCL10143.163 (±5.162)372.870 (±16.491)<1.6552964.750 (±991.557)75.195 (±2.178)151.400 (±5.605)778.045 (±52.223)5.035 (±0.430)2951.205 (±840.243)207.890 (±63.633)
CX3CL149.290 (±3.842)164.840 (±4.438)21.543 (±1.511)44.715 (±2.424)92.060 (±6.627)60.225 (±2.750)323.065 (±11.234)20.505 (±0.913)52.313 (±8.922)336.315 (±116.011)
IL-1α8.985 (±0.297)17.460 (±0.187)<2.5605.265 (±0.220)<2.56012.563 (±1.887)35.945 (±2.826)<2.5606.508 (±0.554)<2.560
IL-1β<2.770<2.770<2.770<2.770<2.770<2.770<2.770<2.770<2.770<2.770
IL-2<2.670<2.670<2.670<2.670<2.670<2.670<2.670<2.670<2.670<2.670
IL-3<2.570<2.570<2.570<2.570<2.570<2.570<2.570<2.570<2.570<2.570
IL-474.775 (±6.307)61.715 (±6.151)<2.70314.198 (±2.139)8.208 (±0.502)77.108 (±6.463)87.700 (±4.876)<2.703 (±0.415)9.453 (±2.059)22.758 (±6.739)
IL-5<2.790<2.790<2.790<2.790<2.790<2.790<2.790<2.790<2.790<2.790
IL-621.295 (±0.856)4583.250 (±119.634)<2.280<2.2803.843 (±0.266)46.883 (±4.309)5391.00 (±502.887)<2.280<2.4854.423 (±0.194)
IL-74.725 (±0.540)16.398 (±1.352)2.728 (±0.759)5.920 (±1.182)7.343 (±1.935)6.728 (±0.849)17.173 (±1.438)<1.8206.668 (±1.515)6.578 (±1.174)
IL-86048.000 (±438.163)5568.250 (±291.235)<1.75024.558 (±8.036)278.205 (±11.059)>6805.0000<1.75033.570 (±8.789)454.288 (±99.778)
IL-9<2.980<2.980<2.980<3.595<2.980<2.980<2.980<2.9805.158 (±0.626)<2.980
IL-102.708 (±0.226)9.503 (±0.792)<1.0802.648 (±0.407)<1.4733.005 (±0.279)12.180 (±1.267)<1.0802.825 (±0.354)<2.133
IL-12p404.780 (±0.302)6.583 (±0.465)<2.4156.785 (±0.546)3.388 (±0.269)5.543 (±0.298)7.803 (±0.252)<1.8685.883 (±0.604)4.188 (±0.393)
IL-12p70<2.0833.228 (±0.263)<1.300<1.640<1.355<2.2934.128 (±0.333)<1.193<2.020<1.793
IL-133.253 (±0.198)5.945 (±0.302)<1.9456.325 (±0.243)<2.2355.628 (±0.276)7.975 (±0.220)<1.9405.893 (±0.912)<3.675
IL-154.103 (±0.278)15.948 (±0.280)<0.8204.493 (±0.870)1.845 (±0.054)6.758 (±0.192)25.093 (±0.447)<0.9083.803 (±0.633)3.483 (±0.503)
IL-17A1.963 (±0.184)2.670 (±0.192)<1.340<1.743<1.4182.130 (±0.178)3.145 (±0.485)<1.340<1.798<1.645
IL-1RA8.918 (±0.528)18.138 (±0.941)4.168 (±0.477)9.645 (±1.276)5.593 (±0.361)13.190 (±1.039)24.433 (±1.700)4.093 (±0.299)9.313 (±1.333)14.175 (±4.190)
G-CSF357.355 (±31.119)337.920 (±6.059)4.438 (±0.224)52.563 (±4.055)30.685 (±5.760)428.770 (±42.610)1464.250 (±181.843)5.638 (±0.299)74.585 (±11.091)34.760 (±7.455)
GM-CSF29.400 (±1.513)1070.000 (±16.678)<2.9207.968 (±0.800<2.97837.430 (±3.884)3871.750 (±101.647)<2.9208.048 (±1.245)<4.253
FLT3L8.170 (±0.318)16.123 (±0.289)<2.91511.138 (±1.771)8.370 (±0.320)9.973 (±0.365)24.038 (±0.268)<2.7987.940 (±1.345)19.983 (±3.394)
sCD40L3.503 (±0.580)5.683 (±0.739)<2.0104.418 (±0.644)<2.0784.225 (±0.379)7.445 (±0.859)<2.0104.448 (±1.000)<3.158
EGF5.685 (±0.172)6.845 (±0.296)3.853 (±0.219)4.637 (±0.257)4.883 (±0.206)6.053 (±0.160)7.095 (±0.409)3.725 (±0.134)5.038 (±0.578)<4.068
FGF-231.070 (±3.084)46.325 (±3.386)9.380 (±1.099)28.823 (±3.851)15.995 (±1.279)161.310 (±3.588)42.680 (±3.098)10.745 (±1.721)25.620 (±4.764)25.545 (±4.515)
TGFα<2.80010.168 (±0.210)9.348 (±0.247)8.935 (±1.131)<2.800<2.80013.255 (±0.373)14.285 (±0.249)6.033 (±0.627)3.798 (±0.445)
PDGF-AA55.013 (±2.143)85.943 (±1.684)42.038 (±0.879)61.323 (±17.375)45.478 (±0.624)99.003 (±3.448)179.295 (±1.338)104.150 (±3.264)42.478 (±11.780)665.713 (±217.050)
PDGF-AB/BB12.120 (±0.833)37.260 (±0.721)201.665 (±13.144)417.443 (±163.571)28.715 (±0.964)12.195 (±0.797)74.628 (±1.039)617.865 (±6.517)270.130 (±67.436)1296.283 (±434.299)
VEGF-A151.368 (±5.500)1775.415 (±112.696)98.468 (±3.220)265.685 (±76.573)216.440 (±3.643)276.750 (±9.789)2070.230 (±51.826)219.028 (±5.175)248.513 (±50.523)316.485 (±8.822)

Cytokine levels [pg/ml] in cell culture medium collected after 24 and 48 hours, measured by MILLIPLEX assay. Each value represents the mean of measurements made in 4 setups. Some setup measurements were below or above assay detection level. If one or more of the 4 measurements in a group were below (above) detection level, then those values were assigned the threshold level and the corresponding mean was reported using the “less than” (“greater than”) symbol. Note that there was no situation in which the 4 setup measurements contained values both above and below detection level.

Table 4

Comparison of cytokine expression between the four breast cancer cell lines and breast non-tumorigenic epithelial cells.

Cytokine24h
48h
MCF-10AMDA-MB-231MCF-7T-47DBT-474StatisticsMCF-10AMDA-MB-231MCF-7T-47DBT-474Statistics
TNFα<1.5482.862 (±0.036)<1.3565.418 (±0.315)3.936 (±0.040)a, p = 0.0012, **b, p < 0.0001, ****d, p < 0.0001, ****e, p < 0.0001, ****f, p < 0.0001, ****g, p 0.0002, ***h, p < 0.0001, ****i, p < 0.0001, ****j, p < 0.0001, ****k, p = 0.0034, **2.035 (±0.039)3.898 (±0.053)<1.3564.893 (±0.422)3.732 (±0.252)a, p = 0.0022, **b, p < 0.0001, ****c, p < 0.0001, ****d, p = 0.0005, ***e, p = 0.0006, ***f, p < 0.0001, ****g, p = 0.0578, NSh, p = 0.5437, NSi, p < 0.0010, ***j, p < 0.0006, ***k, p = 0.0561, NS
TNFβ<1.307<1.516<1.1761.228<1.176a, p = 0.2416, NSb, p = 0.0503, NSd, p = 0.6667, NSg, p = 0.1852, NS<1.429<1.802<1.176<1.255<1.255a, p = 0.1000, NS
IFN-α2<2.141<2.977<2.201<2.511<2.536a, p = 0.9485, NS<2.486<2.968<2.1173.564 (±0.180)3.776 (±0.342)a, p = 0.2487, NS
IFN-γ1.916 (±0.161)3.040 (±0.107)<0.8952.288 (±0.134)<0.907a, p = 0.0014, **b, p = 0.0011, **c, p < 0.0042, **d, p = 0.1265, NSe, p < 0.0045, **f, p < 0.0001, ****g, p = 0.0046, **h, p < 0.0001, ****i, p < 0.0003, ***k, p < 0.0003, ***1.719 (±0.121)2.951 (±0.101)<0.8952.478 (±0.275)<1.756a, p = 0.0043, **b, p = 0.0002, ***c, p < 0.0030, **d, p = 0.0449, *f, p < 0.0001, ****g, p = 0.1571, NSh, p < 0.0002, ***i, p < 0.0066, **k, p < 0.1126, NS
CCL29.685 (±0.105)10.058 (±0.065)<1.59511.677 (±0.163)8.077 (±0.024)a, p = 0.0010, **b, p = 0.0236, *c, p < 0.0001 ****d, p < 0.0001, ****e, p < 0.0001, ****f, p < 0.0001 ****g, p < 0.0001, ****h, p < 0.0001, ****i, p < 0.0001 ****j, p < 0.0001 ****k, p < 0.0001, ****10.693 (±0.092)11.098 (±0.059)<1.68811.276 (±0.376)9.143 (±0.380)a, p = 0.0033, **b, p = 0.0100, **c, p < 0.0001, ****d, p = 0.1823, NSe, p = 0.0074, **f, p < 0.0001, ****g, p = 0.6553, NSh, p = 0.0023, **i, p < 0.0001, ****j, p < 0.0001, ****k, p = 0.0072, **
CCL3<2.9873.423 (±0.046)<2.987<2.987<2.987a, p = 0.0009, ***b, p < 0.0006, ***f, p < 0.0006, ***g, p < 0.0006, ***h, p < 0.0006, ***<2.9874.444 (±0.051)<2.987<2.987<2.987a, p = 0.0009, ***b, p < 0.0001, ****f, p < 0.0001, ****g, p < 0.0001, ****h, p < 0.0001, ****
CCL42.126 (±0.041)2.960 (±0.042)<1.5315.356 (±0.277)1.969 (±0.154)a, p = 0.0014, **b, p < 0.0001, ****c, p < 0.0001 ****d, p < 0.0001, ****e, p = 0.3633, NSf, p < 0.0001 ****g, p = 0.0001, ***h, p = 0.0008, ***i, p < 0.0001 ****j, p < 0.0915, NSk, p < 0.0001, ****2.328 (±0.044)3.676 (±0.012)<1.5314.627 (±0.285)2.190 (±0.224)a, p = 0.0015, **b, p < 0.0001, ****c, p < 0.0001, ****d, p = 0.0002, ***e, p = 0.5696, NSf, p < 0.0001, ****g, p = 0.0156, *h, p = 0.0006, ***i, p < 0.0003, ***j, p < 0.0831, NSk, p = 0.0005, ***
CCL53.165 (±0.023)6.680 (±0.026)2.468 (±0.059)7.844 (±0.123)7.274 (±0.013)a, p < 0.0001, ****b, p < 0.0001, ****c, p < 0.0001, ****d, p < 0.0001, ****e, p < 0.0001, ****f, p < 0.0001, ****g, p < 0.0001, ****h, p < 0.0001, ****i, p < 0.0001, ****j, p < 0.0001, ****k, p = 0.0037, **3.930 (±0.043)7.497 (±0.041)2.768 (±0.141)7.757 (±0.251)8.422 (±0.335)a, p < 0.0001, ****b, p < 0.0001, ****c, p = 0.0002, ***d, p < 0.0001, ****e, p < 0.0001, ****f, p < 0.0001, ****g, p = 0.3459, NSh, p = 0.0336, *i, p < 0.0001, ****j, p < 0.0001, ****k, p = 0.1631, NS
CCL73.618 (±0.077)3.619 (±0.097)<1.6723.406 (±0.186)2.224 (±0.101)a, p = 0.0044, **b, p = 0.9938, NSc, p < 0.0001, ****d, p = 0.3300, NSe, p < 0.0001, ****f, p < 0.0001, ****g, p = 0.3466, NSh, p < 0.0001, ****i, p < 0.0006, ***j, p < 0.0081, **k, p = 0.0014, **3.704 (±0.031)3.805 (±0.131)<1.6723.082 (±0.184)2.550 (±0.315)a, p = 0.0022, **b, p = 0.4817, NSc, p < 0.0001, ****d, p = 0.0156, *e, p = 0.0108, *f, p < 0.0001, ****g, p = 0.0185, *h, p = 0.0104, *i, p < 0.0016, **j, p < 0.0963, NSk, p = 0.1950, NS
CCL113.203 (±0.031)3.242 (±0.038)<1.5801.934 (±0.094)2.048 (±0.128)a, p = 0.0021, **b, p = 0.4583, NSc, p < 0.0001, ****d, p < 0.0001, ****e, p = 0.0001, ***f, p < 0.0001 ****g, p < 0.0001, ****h, p = 0.0001, ***i, p < 0.0368, *j, p < 0.0412, *k, p 0.4999, NS3.248 (±0.045)3.335 (±0.033)<1.580<1.9512.036 (±0.076)a, p = 0.0024, **b, p = 0.1733, NSc, p < 0.0001, ****d, p < 0.0001, ****e, p < 0.0001, ****f, p < 0.0001, ****g, p < 0.0001, ****h, p < 0.0001, ****j, p < 0.0055, **k, p < 0.4623, NS
CCL223.171 (±0.173)3.633 (±0.050)3.115 (±0.088)3.645 (±0.162)4.148 (±0.083)a, p = 0.0001, ***b, p = 0.0426, *c, p = 0.7827, NSd, p = 0.0925, NSe, p = 0.0022, **f, p = 0.0022, **g, p = 0.9458, NSh, p = 0.0018, **i, p = 0.0282, *j, p = 0.0001, ***k, p = 0.0326, *3.343 (±0.093)3.878 (±0.137)3.368 (±0.050)3.397 (±0.164)5.867 (±0.541)a, p < 0.0001, ****b, p = 0.0180, *c, p = 0.8220, NSd, p = 0.7862, NSe, p = 0.0037, **f, p = 0.0130, *g, p = 0.0659, NSh, p = 0.0118, *i, p = 0.8726, NSj, p = 0.0037, **k, p = 0.0047, **
CXCL113.082 (±0.099)12.140 (±0.050)2.005 (±0.134)8.664 (±0.414)8.598 (±0.036)a, p < 0.0001, ****b, p = 0.0001, ***c, p < 0.0001, ****d, p < 0.0001, ****e, p < 0.0001, ****f, p < 0.0001, ****g, p = 0.0002, ***h, p < 0.0001, ****i, p < 0.0001, ****j, p < 0.0001, ****k, p = 0.8800, NS12.953 (±0.097)13.348 (±0.105)<1.8287.858 (±0.333)10.319 (±0.471)a, p = 0.0012, **b, p = 0.0323, *c, p < 0.0001, ****d, p < 0.0001, ****e, p = 0.0015, **f, p < 0.0001, ****g, p < 0.0001, ****h, p = 0.0008, ***i, p < 0.0001, ****j, p < 0.0001, ****k, p = 0.0053, **
CXCL107.159 (±0.053)8.538 (±0.064)<0.52311.396 (±0.370)6.231 (±0.042)a, p = 0.0011, **b, p < 0.0001, ****c, p < 0.0001, ****d, p < 0.0001, ****e, p < 0.0001, ****f, p < 0.0001, ****g, p = 0.0003, ***h, p < 0.0001, ****i, p < 0.0001, ****j, p < 0.0001, ****k, p < 0.0001, ****7.239 (±0.054)9.593 (±0.101)2.316 (±0.124)11.263 (±0.576)7.466 (±0.486)a, p < 0.0001, ****b, p < 0.0001, ****c, p < 0.0001, ****d, p = 0.0004, ***e, p = 0.6597, NSf, p < 0.0001, ****g, p = 0.0290, *h, p = 0.0052, **i, p < 0.0001, ****j, p < 0.0001, ****k, p = 0.0024, **
CX3CL15.609 (±0.118)7.360 (±0.070)4.419 (±0.101)5.476 (±0.078)6.513 (±0.102)a, p < 0.0001, ****b, p < 0.0001, ****c, p = 0.0003, ***d, p = 0.0318, NSe, p = 0.0012, **f, p < 0.0001, ****g, p < 0.0001, ****h, p = 0.0005, ***i, p = 0.0002, ***j, p < 0.0001, ****k, p = 0.0002, ***5.908 (±0.069)8.333 (±0.050)4.354 (±0.061)5.657 (±0.220)8.119 (±0.550)a, p < 0.0001, ****b, p < 0.0001, ****c, p < 0.0001, ****d, p = 0.3188, NSe, p = 0.0072, **f, p < 0.0001, ****g, p < 0.0001, ****h, p = 0.7118, NSi, p = 0.0012, **j, p = 0.0005, ***k, p = 0.0060, **
IL-1α3.165 (±0.048)4.126 (±0.015)<1.3562.393 (±0.061)<1.356a, p = 0.0010, **b, p < 0.0001, ****c, p < 0.0001, ****d, p < 0.0001, ****e, p < 0.0001, ****f, p < 0.0001, ****g, p < 0.0001, ****h, p < 0.0001, ****i, p < 0.0001, ****k, p < 0.0001, ****3.608 (±0.213)5.154 (±0.114)<1.3562.686 (±0.128)<1.356a, p = 0.0010, **b, p = 0.0007, ***c, p < 0.0003, ***d, p = 0.0100, *e, p < 0.0003, ***f, p < 0.0001, ****g, p < 0.0001, ****h, p < 0.0001, ****i, p < 0.0003, ***k, p < 0.0003, ***
IL-1β<1.470<1.470<1.470<1.470<1.470<1.470<1.470<1.470<1.470<1.470
IL-2<1.417<1.417<1.417<1.417<1.417<1.417<1.417<1.417<1.417<1.417
IL-3<1.362<1.362<1.362<1.362<1.362<1.362<1.362<1.362<1.362<1.362
IL-46.209 (±0.121)5.929 (±0.131)<1.4173.788 (±0.199)3.029 (±0.085)a, p = 0.0013, **b, p = 0.1676, NSc, p < 0.0001, ****d, p < 0.0001, ****e, p < 0.0001, ****f, p < 0.0001, ****g, p = 0.0001, ***h, p < 0.0001, ****i, p < 0.0002, ***j, p < 0.0001, ****k, p = 0.0126, *6.253 (±0.123)6.448 (±0.080)<1.4173.142 (±0.306)4.301 (±0.490)a, p = 0.0018, **b, p = 0.2335, NSc, p < 0.0001, ****d, p < 0.0001, ****e, p = 0.0083, **f, p < 0.0001, ****g, p < 0.0001, ****h, p = 0.0050, **i, p < 0.0072, **j, p < 0.0059, **k, p = 0.0915, NS
IL-5<1.480<1.480<1.480<1.480<1.480<1.480<1.480<1.480<1.480<1.480
IL-64.409 (±0.058)12.161 (±0.038)<1.189<1.1891.932 (±0.096)a, p = 0.0010, **b, p < 0.0001, ****c, p < 0.0001, ****d, p < 0.0001, ****e, p < 0.0001, ****f, p < 0.0001, ****g, p < 0.0001, ****h, p < 0.0001, ****j, p < 0.0015, **k, p < 0.0015, **5.532 (±0.135)12.378 (±0.132)<1.189<1.3002.141 (±0.064)a, p = 0.0011, **b, p < 0.0001, ****c, p < 0.0001, ****d, p < 0.0001, ****e, p < 0.0001, ****f, p < 0.0001, ****g, p < 0.0001, ****h, p < 0.0001, ****j, p < 0.0001, ****k, p < 0.0001, ****
IL-72.214 (±0.155)4.023 (±0.109)1.260 (±0.432)2.474 (±0.302)2.717 (±0.401)a, p = 0.0003, ***b, p < 0.0001, ****c, p = 0.0831, NSd, p = 0.4721, NSe, p = 0.2865, NSf, p = 0.0008, ***g, p = 0.0029, **h, p = 0.0200, *i, p = 0.0610, NSj, p = 0.0485, *k, p = 0.6462, NS2.717 (±0.178)4.087 (±0.121)<0.8032.619 (±0.344)2.644 (±0.271)a, p = 0.0054, **b, p = 0.0007, ***c, p < 0.0003, ***d, p = 0.8088, NSe, p = 0.8299, NSf, p < 0.0001, ****g, p = 0.0069, **h, p = 0.0028, **i p < 0.0098, **j, p < 0.0030, **k, p = 0.9559, NS
IL-812.551 (±0.103)12.427 (±0.124)<0.8074.481 (±0.350)8.117 (±0.057)a, p = 0.0015, **b, p = 0.4705, NSc, p < 0.0001, ****d, p < 0.0001, ****e, p < 0.0001, ****f, p < 0.0001, ****g, p < 0.0001, ****h, p < 0.0001, ****i, p < 0.0003, ***j, p < 0.0001, ****k, p < 0.0001, ****>12.785>12.970<0.8074.925 (±0.406)8.715 (±0.334)a, p = 0.0011, **c, p < 0.0001, ****d, p < 0.0001, ****e, p < 0.0001, ****f, p < 0.0001, ****g, p < 0.0001, ****h, p < 0.0001, ****i, p < 0.0004, ***j, p < 0.0001, ****k, p = 0.0004, ***
IL-9<1.575<1.575<1.575<1.838<1.575a, p = 0.0099 **<1.575<1.575<1.5752.334 (±0.178)<1.575a, p = 0.0009, ***d, p < 0.0236, NSg, p < 0.0236, NSi, p < 0.0236, NSk, p < 0.0236, NS
IL-101.421 (±0.125)3.234 (±0.118)<0.1111.357 (±0.209)0.504a, p = 0.0021, **b, p < 0.0001, ****c, p < 0.0003, ***d, p = 0.8024, NSe, p < 0.0021, **f, p < 0.0001, ****g, p = 0.0002, ***h, p < 0.0001, ****i, p < 0.0056, ****k, p < 0.0279, *1.569 (±0.135)3.583 (±0.149)<0.1111.461 (±0.195)<1.002a, p = 0.0039, **b, p < 0.0001, ****c, p < 0.0003, ***d, p = 0.6646, NSe, p < 0.0249, NSf, p < 0.0001, ****g, p = 0.0001, ***h, p < 0.0001, ***i, p < 0.0027, **k, p < 0.1474
IL-12p402.248 (±0.094)2.707 (±0.110)<1.2512.748 (±0.121)1.747 (±0.115)a, p < 0.0001, ****b, p = 0.0194, *c, p < 0.0003, ***d, p = 0.0173, *e, p = 0.0148, *f, p < 0.0001, ****g, p = 0.8103, NSh, p = 0.0009, ***i, p < 0.0001, ****j, p < 0.0224, *k, p = 0.0010, ***2.464 (±0.076)2.962 (±0.048)<0.9002.535 (±0.141)2.047 (±0.133)a, p = 0.0025, **b, p = 0.0014, **c, p < 0.0001, ****d, p = 0.6744, NSe, p = 0.0346, *f, p < 0.0001, ****g, p 0.0288, *h, p = 0.0006, ***i, p < 0.0002, ***j, p < 0.0009, ***k, p = 0.4459, *
IL-12p70<0.9731.675 (±0.121)<0.350<0.613<0.401a, p = 0.0198, *b, p < 0.0064, **c, p = 0.0160, *d, p = 0.3972, NSe, p = 0.0145, *f, p < 0.0002, ***g, p < 0.0008, ***h, p < 0.0003, ***i, p = 0.0550, NSj, p = 0.4226, NSk, p = 0.0322, *<1.0861.987 (±0.243)<0.241<0.928<0.758a, p = 0.0425, *b, p < 0.0395, *f, p < 0.0023, **g, p < 0.0216, *h, p < 0.0117, *
IL-131.694 (±0.086)2.566 (±0.074)<0.9562.658 (±0.054)<1.140a, p = 0.0017, **b, p = 0.0003, ***c, p < 0.0009, ***d, p < 0.0001, ****e, p < 0.0039, **f, p < 0.0001, ****g, p = 0.3510, NSh, p < 0.0001, ****i, p < 0.0001, ****k, p < 0.0001, ****2.487 (±0.071)2.994 (±0.039)<0.9562.516 (±0.205)<1.773a, p = 0.0034, **b, p = 0.0008, ***c, p < 0.0001, ****d, p = 0.8974, NSe, p < 0.0004, ***f, p < 0.0001, ****g, p = 0.0625, NSh, p < 0.0001, ****i, p < 0.0017, **k, p < 0.0430, *
IL-152.026 (±0.102)3.995 (±0.025)< −0.2862.083 (±0.288)0.882 (±0.042)a, p = 0.0015, **b, p < 0.0001, ****c, p < 0.0001, ****d, p = 0.8593, NSe, p < 0.0001, ****f, p < 0.0001, ****g, p = 0.0006, ***h, p < 0.0001, ****i, p < 0.0011, **j, p < 0.0001, ****k, p = 0.0062, **2.755 (±0.041)6.648 (±0.026)< −0.1481.887 (±0.199)1.776 (±0.154)a, p = 0.0016, **b, p < 0.0001, ****c, p < 0.0001, ****d, p = 0.0053, **e, p = 0.0009, ***f, p < 0.0001, ****g, p < 0.0001, ****h, p < 0.0001, ****i, p < 0.0004, ***j, p < 0.0001, ****k, p = 0.6748, NS
IL-17A0.954 (±0.136)1.405 (±0.105)<0.422<0.783<0.500a, p = 0.0053, **b, p = 0.0390, *c, p < 0.0327, *d, p < 0.4101, NSe, p < 0.0001, ****f, p < 0.0006, ***g, p < 0.0057, **h, p < 0.0001, ****k, p = 0.0809, NS1.075 (±0.126)1.604 (±0.216)<0.422<0.819<0.693a, p = 0.0074, **b, p = 0.0786, NSc, p < 0.0105, *d, p < 0.2005, NSe, p < 0.0755, NSf, p < 0.0082, **g, p < 0.0422, *h, p < 0.0244, *
IL-1RA3.149 (±0.082)4.175 (±0.077)2.033 (±0.154)3.231 (±0.195)2.474 (±0.095)a, p < 0.0001, ****b, p < 0.0001, ****c, p = 0.0007, ***d, p = 0.7134, NSe, p = 0.0017, **f, p < 0.0001, ****g, p = 0.0041, **h, p < 0.0001, ****i, p = 0.0030, **j, p = 0.0506, NSk, p = 0.0130, *3.710 (±0.105)4.600 (±0.099)2.021 (±0.108)3.180 (±0.200)3.661 (±0.426)a, p < 0.0001, ****b, p = 0.0008, ***c, p < 0.0001, ****d, p = 0.0572, NSe, p = 0.9164, NSf, p < 0.0001, ****g, p = 0.0007, ***h, p = 0.0755, NSi, p = 0.0022, **j, p = 0.0097, **k, p = 0.3451, NS
G-CSF8.465 (±0.125)8.400 (±0.026)2.145 (±0.067)5.703 (±0.113)4.874 (±0.267)a, p < 0.0001, ****b, p = 0.6295, NSc, p < 0.0001, ****d, p < 0.0001, ****e, p < 0.0001, ****f, p < 0.0001, ****g, p < 0.0001, ****h, p < 0.0001, ****i, p < 0.0001, ****j, p < 0.0001, ****k, p = 0.0288, *8.720 (±0.158)10.482 (±0.181)2.489 (±0.076)6.173 (±0.193)5.032 (±0.301)a, p < 0.0001, ****b, p = 0.0003, ***c, p < 0.0001, ****d, p < 0.0001, ****e, p < 0.0001, ****f, p < 0.0001, ****g, p < 0.0001, ****h, p < 0.0001, ****i, p < 0.0001, ****j, p = 0.0002, ***k, p = 0.0188, *
GM-CSF4.872 (±0.075)10.063 (±0.023)<1.5462.972 (±0.146)<1.573a, p = 0.0011, **b, p < 0.0001, ****c, p < 0.0001, ****d, p < 0.0001, ****e, p = 0.0003, ***f, p < 0.0001, ****g, p < 0.0001, ****h, p < 0.0001, ****i, p < 0.0005, ***k, p = 0.0273, *5.203 (±0.150)11.917 (±0.038)<1.5462.957 (±0.223)<2.059a, p = 0.0011, **b, p < 0.0001, ****c, p < 0.0001, ****d, p = 0.0002, ***e, p < 0.0001, ****f, p < 0.0001, ****g, p < 0.0001, ****h, p < 0.0001, ****i, p < 0.0043, **k, p < 0.0296, *
FLT3L3.027 (±0.056)4.010 (±0.026)<1.5253.439 (±0.197)3.063 (±0.050)a, p = 0.0037, **b, p < 0.0001, ****c, p < 0.0001, ****d, p = 0.0911, NSe, p = 0.6482, NSf, p < 0.0001, ****g, p = 0.0282, *h, p < 0.0001, ****i, p < 0.0005, ***j, p < 0.0001, ****k, p = 0.1138, NS3.316 (±0.046)4.587 (±0.016)<1.4592.941 (±0.211)4.199 (±0.365)a, p = 0.0039, **b, p < 0.0001, ****c, p < 0.0001, ****d, p = 0.1332, NSe, p = 0.0533, NSf, p < 0.0001, ****g, p = 0.0002, ***h, p = 0.3288, NSi, p < 0.0025, **j, p < 0.0018, **k, p = 0.0245, *
sCD40L1.745 (±0.252)2.467 (±0.199)<1.0072.093 (±0.227)<1.053a, p = 0.0041, **b, p = 0.0651, NSc, p < 0.0835, NSd, p = 0.3442, NSe, p < 0.0997, NSf, p < 0.0020, **g, p = 0.2602, NSh, p < 0.0024, **i, p < 0.0148, *k, p < 0.0177, *2.061 (±0.134)2.876 (±0.147)<1.0072.034 (±0.347)<1.603a, p = 0.0071, **b, p = 0.0063, **c, p < 0.0014, **d, p = 0.9445, NSe, p < 0.0001, ****f, p < 0.0001, ****g, p = 0.0668, NSh, p < 0.0001, ****i, p < 0.0816, NSk, p < 0.0031, **
EGF2.505 (±0.045)2.771 (±0.065)1.938 (±0.087)2.207 (±0.080)2.256 (±0.176)a, p = 0.0004, ***b, p = 0.0147, *c, p = 0.0012, **d, p = 0.0174, *e, p = 0.2187, NSf, p = 0.0003, ***g, p = 0.0016, **h, p = 0.0333, *i, p = 0.0640, NSj, p = 0.1559, NSk, p = 0.8062, NS2.596 (±0.039)2.820 (±0.084)1.895 (±0.051)2.311 (±0.142)<1.971a, p = 0.0065, **b, p = 0.0516, NSc, p < 0.0001, ****d, p = 0.1014, NSe, p = 0.0747, NSf, p < 0.0001, ****g, p = 0.0215, *h, p = 0.0286, *i, p = 0.0329, *j, p = 0.3603, NSk, p = 0.4962, NS
FGF-24.936 (±0.144)5.522 (±0.106)3.197 (±0.183)4.806 (±0.208)3.990 (±0.093)a, p < 0.0001, ****b, p = 0.0168, *c, p = 0.0003, ***d, p = 0.6269, NSe, p = 0.0015, **f, p < 0.0001, ****g, p = 0.0222, *h, p < 0.0001, ****i, p = 0.0012, **j, p = 0.0083, **k, p = 0.0117, *7.333 (±0.032)5.404 (±0.108)3.365 (±0.246)4.627 (±0.218)4.599 (±0.277)a, p < 0.0001, ****b, p < 0.0001, ****c, p < 0.0001, ****d, p < 0.0001, ****e, p < 0.0001, ****f, p = 0.0003, ***g, p = 0.0189, *h, p = 0.0355, *i, p = 0.0086, **j, p = 0.0159, *k, p = 0.9399, NS
TGFα<1.4853.345 (±0.030)3.223 (±0.038)3.124 (±0.186)<1.485a, p = 0.0038, **b, p < 0.0001, ****c, p < 0.0001, ****d, p < 0.0008, ***f, p = 0.0459, *g, p = 0.2839, NSh, p < 0.0001, ****i, p = 0.6189, NSj, p < 0.0001, ****k, p < 0.0008, ***<1.4853.727 (±0.042)3.836 (±0.025)2.571 (±0.148)1.895 (±0.172)a, p = 0.0013, **b, p < 0.0001, ****c, p < 0.0001, ****d, p < 0.0020, ****e, p < 0.1425f, p = 0.0662, NSg, p = 0.0003, ***h, p < 0.0001, ****i, p = 0.0001, ***j, p < 0.0001, ****k, p = 0.0242, *
PDGF-AA5.778 (±0.056)6.424 (±0.029)5.393 (±0.030)5.740 (±0.447)5.507 (±0.020)a, p = 0.0228, *b, p < 0.0001, ****c, p = 0.0009, ***d, p = 0.9343, NSe, p = 0.0038, **f, p < 0.0001, ****g, p = 0.1772, NSh, p < 0.0001, ****i, p = 0.4781, NSj, p = 0.0198, *k, p = 0.6212, NS6.627 (±0.051)7.486 (±0.011)6.700 (±0.046)5.256 (±0.408)9.247 (±0.394)a, p < 0.0001, ****b, p < 0.0001, ****c, p = 0.3251, NSd, p = 0.0158, *e, p = 0.0006, ***f, p < 0.0001, ****g, p = 0.0016, **h, p = 0.0042, **i, p = 0.0126, *j, p = 0.0007, ***k, p = 0.0004, ***
PDGF-AB/BB3.588 (±0.104)5.179 (±0.033)7.647 (±0.095)8.473 (±0.486)4.841 (±0.048)a, p < 0.0001, ****b, p < 0.0001, ****c, p < 0.0001, ****d, p < 0.0001, ****e, p < 0.0001, ****f, p < 0.0001, ****g, p = 0.0005, ***h, p = 0.0012, **i, p = 0.1461, NSj, p < 0.0001, ****k, p = 0.0003, ***3.598 (±0.101)6.221 (±0.020)9.271 (±0.015)8.043 (±0.190)10.309 (±0.176)a, p < 0.0001, ****b, p < 0.0001, ****c, p < 0.0001, ****d, p < 0.0001, ****e, p < 0.0001, ****f, p < 0.0001, ****g, p < 0.0001, ****h, p < 0.0001, ****i, p = 0.0007, ***j, p = 0.0011, **k, p = 0.0001, ***
VEGF-A7.239 (±0.053)10.785 (±0.093)6.619 (±0.047)7.846 (±0.457)7.757 (±0.024)a, p < 0.0001, ****b, p < 0.0001, ****c, p = 0.0001, ***d, p = 0.2352, NSe, p = 0.0001, ***f, p < 0.0001, ****g, p = 0.0007, ***h, p < 0.0001, ****i, p = 0.0371, *j, p < 0.0001, ****k, p = 0.8519, NS8.110 (±0.051)11.014 (±0.036)7.774 (±0.034)7.846 (±0.345)8.304 (±0.039)a, p < 0.0001, ****b, p < 0.0001, ****c, p = 0.0015, **d, p = 0.4779, NSe, p = 0.0229, *f, p < 0.0001, ****g, p < 0.0001, ****h, p < 0.0001, ****i, p = 0.8417, NSj, p < 0.0001, ****k, p = 0.2347, NS

Cytokine levels are presented in log scale, base 2 (±SEM). Each value is the mean of measurements from 4 independent setups. In the case of values below or above detection level, means and p-values are reported using “less than” or “greater than” symbols. a, ANOVA; b, MCF-10A vs. MDA-MB-231; c, MCF-10A vs. MCF-7; d, MCF-10A vs. T-47D; e, MCF-10A vs. BT-474; f, MDA-MB-231 vs. MCF-7; g, MDA-MB-231 vs. T-47D; h, MDA-MB-231 vs. BT-474; i, MCF-7 vs. T-47D; j, MCF-7 vs. BT-474; k, T-47D vs. BT-474; NS, non-significant (p > 0.05); *p ≤ 0.05; **p ≤ 0.01; ***p ≤ 0.001; ****p ≤ 0.0001.

Categorization and molecular characteristics of the cell lines used. [1,2] ER, estrogen receptor; PR, progesterone receptor; HER2, human epidermal growth factor receptor 2; BRCA1, breast cancer gene 1; WT, wild type; TNB, triple-negative B; B, basal; LA, luminal A; LB, luminal B; AC, adenocarcinoma; IDC, invasive lobular carcinoma. List of cytokines measured by MILLIPLEX assay. Basal cytokine secretion in breast cancer cell lines. Cytokine levels [pg/ml] in cell culture medium collected after 24 and 48 hours, measured by MILLIPLEX assay. Each value represents the mean of measurements made in 4 setups. Some setup measurements were below or above assay detection level. If one or more of the 4 measurements in a group were below (above) detection level, then those values were assigned the threshold level and the corresponding mean was reported using the “less than” (“greater than”) symbol. Note that there was no situation in which the 4 setup measurements contained values both above and below detection level. Comparison of cytokine expression between the four breast cancer cell lines and breast non-tumorigenic epithelial cells. Cytokine levels are presented in log scale, base 2 (±SEM). Each value is the mean of measurements from 4 independent setups. In the case of values below or above detection level, means and p-values are reported using “less than” or “greater than” symbols. a, ANOVA; b, MCF-10A vs. MDA-MB-231; c, MCF-10A vs. MCF-7; d, MCF-10A vs. T-47D; e, MCF-10A vs. BT-474; f, MDA-MB-231 vs. MCF-7; g, MDA-MB-231 vs. T-47D; h, MDA-MB-231 vs. BT-474; i, MCF-7 vs. T-47D; j, MCF-7 vs. BT-474; k, T-47D vs. BT-474; NS, non-significant (p > 0.05); *p ≤ 0.05; **p ≤ 0.01; ***p ≤ 0.001; ****p ≤ 0.0001.

Experimental design, materials and methods

Cell lines

MDA-MB-231 (Cat. # HTB-26) and MCF-7 (Cat. # HTB-22) cells were purchased from the American Type Culture Collection (ATCC). T-47D, BT-474, and MCF-10A cells were a generous gift from Dr. Dipali Sharma's laboratory at Sidney Kimmel Comprehensive Cancer Center at the Johns Hopkins University in Baltimore, Maryland. MDA-MB-231, MCF-7, T-47D, and BT-474 cells were grown in Dulbecco's Modified Eagle's Medium (DMEM) (Cat. # 10-013-CF, Corning) supplemented with 10% fetal bovine serum (FBS) (Cat. # 1500–500, VWR International) and antibiotic/antimycotic solution (containing 10,000 IU penicillin, 10,000 μg/ml streptomycin, and 25 μg/ml amphotericin B) (Cat. # 30-004-CI, Corning, Inc.) at 37 °C/5% CO2. MCF-10A cells were grown in Gibco HuMEC Ready Medium kit (Thermo Fisher Scientific) containing HuMEC Basal Medium, HuMEC supplement, and bovine pituitary extract (BPE) additionally supplemented with 10% FBS and antibiotic/antimycotic mixture.

Experimental conditions

For experiments, 0.3 × 106 cells were seeded in 6-well plates containing complete growing cell culture medium. On the following day, the medium in each well was replaced with 1 ml serum-free medium, and the cells were incubated for an additional 24 or 48 hours. After the experiment, the cell culture conditioned medium was collected and centrifuged to remove all dead cells and debris, and stored at −86 °C until further analyzed.

LLIPLEX assay

Cytokine levels in cell culture conditioned medium were measured using 41 cytokine MILLIPLEX assay kit [Cat. # HCYTMAG-60K-PX41, MilliporeSigma] and MAGPIX Multiplexing System [MilliporeSigma] following the manufacturer's protocol. Data were analyzed using xPONENT4.2 and Milliplex Analyst 5.1 data analysis software [MilliporeSigma].

Statistical analyses

Data from four independent experiment setups were presented as mean ± SEM and analyzed on the logarithmic scale base 2. One-way ANOVA tests (if complete data) or Kruskal-Wallis tests (if some out-of-range data) were used to assess overall significance. Independent t-tests were used for post-hoc pairwise comparisons. T-tests with summary data were used if one of the two groups had values below or above detection level. For overall tests, data were considered statistically significant at the p < 0.05 level of significance. For post-hoc tests, a Bonferoni-adjusted significance level of p < 0.005 is recommended. All analyses were performed using SAS version 9.4 (SAS Institute).

Specifications Table

Subject areaBiology
More specific subject areaOncology
Type of dataTables
How data was acquiredMILLIPLEX assay
Data formatRaw and analyzed
Experimental factorsCytokine levels in conditioned medium of human breast cancer and non-tumorigenic breast epithelial cells harvested at 24 and 48 hours.
Experimental featuresCytokine levels in cell culture conditioned medium from various human breast cancer cell lines (MDA-MB-231, MCF-7, T-47D, and BT-474 cells) were measured and compared to those from non-tumorigenic breast epithelial MCF-10A cells.
Data source locationNew York, New York, USA
Data accessibilityOn a public repositoryRepository name: Mendeley DataData identification number: https://doi.org/10.17632/tvt8zm37w5.2Direct URL to data: https://doi.org/10.17632/tvt8zm37w5.2
Value of the Data

Breast cancer cells are highly secretory cells producing variety of cytokines and other molecules that can modulate or are modulated by the tumor microenvironment.

Inflammation mediates the initiation and progression of breast cancer, including directly affecting secretory activity of the cancer cells.

Understanding the bi-directional communication between tumor microenvironment and the cancer cells can lead to the development of novel therapies for breast cancer.

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