| Literature DB >> 31819547 |
Hui Xu1, Shu-Ying Yu2,3,4, Meng-Lan Zhou2,3,4, Ya-Ting Ning2,3,4, Meng Xiao2,4, Xiao-Gai Li1, Meng Chen2,5, Fanrong Kong6, Sharon Chen6, Liang Ming1, Ying-Chun Xu2,3.
Abstract
INTRODUCTION: As participants of the national China Hospital Invasive Fungal Surveillance Net program, we sought to describe the epidemiology and antifungal susceptibility patterns of yeast isolates obtained from patients with invasive fungal infection at the First Affiliated Hospital of Zhengzhou University, China.Entities:
Keywords: antifungal susceptibility; epidemiology; invasive yeast infection
Year: 2019 PMID: 31819547 PMCID: PMC6878932 DOI: 10.2147/IDR.S227839
Source DB: PubMed Journal: Infect Drug Resist ISSN: 1178-6973 Impact factor: 4.003
Clinical Characteristics Of Patients And Species Distribution Of The Yeast Isolates
| Patients Characteristic | Number (%) Of Isolates | |||||||
|---|---|---|---|---|---|---|---|---|
| Total | Othersb | |||||||
| Female | 185 (42.6) | 63 (34.1) | 40 (21.6) | 26 (14.1) | 24 (13.0) | 13 (7.0) | 6 (3.2) | 13 (7.0) |
| Male | 249 (57.4) | 84 (33.7) | 69 (27.7) | 49 (19.7) | 15 (6.0) | 16 (6.4) | 5 (2.0) | 11 (4.4) |
| 0–1 | 31 (7.1) | 11 (35.5) | 5 (16.1) | 1 (3.2) | 3 (9.7) | 11 (35.5) | - | - |
| 2–14 | 15 (3.5) | 3 (20.0) | 7 (46.7) | - | - | 1 (6.7) | 4 (26.6) | - |
| 15–49 | 139 (32.0) | 41 (29.5) | 38 (27.4) | 33 (23.7) | 10 (7.2) | 5 (3.6) | 2 (1.4) | 10 (7.2) |
| 50–65 | 115 (26.5) | 43 (37.4) | 28 (24.3) | 14 (12.2) | 11 (9.6) | 6 (5.2) | 5 (4.3) | 8 (7.0) |
| >65 | 134 (30.9) | 49 (36.6) | 31 (23.1) | 27 (20.1) | 15 (11.2) | 6 (4.5) | - | 6 (4.5) |
| ICU | 168 (38.7) | 69 (41.1) | 43 (25.6) | 28 (16.6) | 15 (8.9) | 4 (2.4) | 4 (2.4) | 5 (3.0) |
| Surgical department | 152 (35.0) | 56 (36.8) | 39 (25.7) | 25 (16.4) | 13 (8.6) | 10 (6.6) | - | 9 (5.9) |
| Medical department | 51 (11.8) | (713.7) | 12 (23.5) | 12 (23.5) | 5 (9.8) | 3 (5.9) | 6 (11.8) | 6 (11.8) |
| Others | 63 (14.5) | 15 (23.8) | 15 (23.8) | 10 (15.9) | 6 (9.5) | 12 (19.0) | 1 (1.6) | 4 (6.4) |
| 2012 | 129 (29.7) | 48 (37.2) | 34 (26.4) | 31 (24.0) | 6 (4.7) | 3 (2.3) | 1 (0.7) | 6 (4.7) |
| 2013 | 114 (26.3) | 46 (40.3) | 17 (14.9) | 19 (16.7) | 17 (14.9) | 6 (5.3) | 4 (3.5) | 5 (4.4) |
| 2014 | 191 (44.0) | 53 (27.7) | 58 (30.4) | 25 (13.1) | 16 (8.4) | 20 (10.5) | 6 (3.1) | 13 (6.8) |
| Blood | 224 (51.6) | 72 (32.1) | 52 (23.2) | 36 (16.1) | 27 (12.1) | 22 (9.8) | 3 (1.3) | 12 (5.4) |
| CVC | 66 (15.2) | 17 (25.8) | 17 (25.8) | 20 (30.3) | 1 (1.4) | 6 (9.1) | - | 5 (7.6) |
| pus | 58 (13.4) | 22 (37.9) | 16 (27.6) | 11 (19.0) | 5 (8.6) | - | - | 4 (6.9) |
| Ascitic fluid | 38 (8.8) | 19 (50.0) | 10 (26.3) | 3 (7.9) | 4 (10.5) | - | - | 2 (5.3) |
| Pleural fluid | 13 (3.0) | 8 (61.5) | 2 (15.4) | 1 (7.7) | - | - | 2 (15.4) | - |
| CSF | 12 (2.7) | 3 (25.0) | 4 (33.3) | 1 (8.4) | - | - | 4 (33.3) | - |
| Bile | 7 (1.6) | 2 (28.6) | 4 (57.1) | - | 1 (14.3) | - | - | - |
| Joint fluid | 6 (1.4) | 1 (16.6) | 1 (16.6) | 2 (33.6) | 1 (16.6) | - | - | 1 (16.6) |
| Tissue | 6 (1.4) | 2 (33.3) | 2 (33.3) | - | - | 1 (16.7) | 1 (16.7) | - |
| Others | 4 (0.9) | 1 (20.0) | 1 (20.0) | 1 (20.0) | - | - | 1 (20.0) | - |
| Total | 434 | 147 (33.9) | 109 (25.1) | 75 (17.3) | 39 (9.0) | 29 (6.7) | 11 (2.5) | 24 (5.5) |
Notes: aThis includes Candida parapsilosis sensu stricto (69 isolates), Candida metapsilosis (3 isolates), Candida orthopsilosis (3 isolates). bThis included Candida krusei (8 isolates), Candida guilliermondii (4 isolates), Candida haemulonii (4 isolates), Candida lusitaniae (1 isolate), Candida intermedia (1 isolate), Kodamaea ohmeri (3 isolates), Rhodotorula mucilaginosa (2 isolates) and Trichosporon asahii (1 isolate).
Comparison Of Identification Results Of The 434 Isolates Between Those Obtained From The First Affiliated Hospital Of Zhengzhou University (Initial identification) And From The Central Laboratory (Final identification)
| Final Identification | Number Of Isolates | Concordance Of Initial And Final Identification Results | ||
|---|---|---|---|---|
| Number (%) Of Isolates With Concordance | Number (%) Of Isolates With Identifcation Errors | |||
| Major Error | Misidentification (Number) | |||
| 147 | 143(97.3) | 4(2.7) | ||
| 109 | 75(68.8) | 34(31.2) | ||
| 75 | 39(52) | 36(48) | ||
| 69 | 39 (56.5) | 30(43.5) | ||
| 3 | – | 3(100) | ||
| 3 | – | 3(100) | ||
| 39 | 30(76.9) | 9(23.1) | ||
| 29 | 8(27.6) | 21(72.4) | ||
| 11 | 8(72.8) | 3(27.2) | ||
| 8 | 4(50.0) | 4(50.0) | ||
| 4 | 1(25.0) | 3(75.0) | ||
| 4 | 1(25.0) | 3(75.0) | ||
| 3 | – | 3(100.0) | ||
| 2 | – | – | ||
| 1 | – | 1(100.0) | ||
| 1 | – | 1(100.0) | ||
| 1 | – | 1(100.0) | ||
| Total | 434 | 309(71.2) | 123(28.3) | – |
Note: aOnly two Rhodotorula mucilaginosa isolates occurred during minor error identification and misidentified to genus level as Rhodotorulaspp.
In Vitro Susceptibility Results Of 434 Isolates To Nine Antifungal Agents
| Species And Agents | MIC (μg/mL) | Number (%) Of Isolates In Each Category | ||||
|---|---|---|---|---|---|---|
| Range | 50% | 90% | S/WT | I/SDD | R/non-WT | |
| Anidulafungin | ≤0.015–0.5 | ≤0.015 | 0.12 | 146(99.3) | 1(0.7) | |
| Micafungin | ≤0.008–0.25 | ≤0.008 | 0.15 | 147(100) | ||
| Caspofungin | 0.015–0.25 | 0.03 | 0.06 | 147(100) | ||
| Posaconazole | ≤0.08–0.5 | 0.015 | 0.03 | 144(98) | 3(2) | |
| Voriconazole | ≤0.08–0.5 | ≤0.08 | 0.15 | 141(95.9) | 6(4.1) | |
| Itraconazole | ≤0.015–0.25 | 0.03 | 0.06 | 146(99.3) | 1(0.7) | |
| Fluconazole | ≤0.12–8 | 0.25 | 0.5 | 146(99.3) | 1(0.7) | |
| 5-Flucytosine | ≤0.06->64 | ≤0.06 | 0.12 | 145(98.6) | 2(1.4) | |
| Amphotericin B | ≤0.12–2 | 0.5 | 1 | 147(100) | ||
| Anidulafungin | ≤0.015->8 | 0.12 | 0.25 | 106(97.2) | 1(0.9) | 2(1.8) |
| Micafungin | ≤0.008->8 | 0.03 | 0.03 | 107(98.2) | 2(1.8) | |
| Caspofungin | 0.015->8 | 0.03 | 0.25 | 106(97.2) | 1(0.9) | 2(1.8) |
| Posaconazole | 0.015–8 | 0.25 | 0.6 | 50(45.9) | 56(54.1) | |
| Voriconazole | ≤0.008->8 | 0.12 | 0.5 | 67(61.5) | 32(29.4) | 10(9.1) |
| Itraconazole | 0.03->16 | 0.25 | 0.5 | 100(91.7) | 9(8.3) | |
| Fluconazole | 0.25->256 | 2 | 16 | 86(78.9) | 10(9.2) | 13(11.9) |
| 5-Flucytosine | ≤0.06–64 | ≤0.06 | 0.12 | 107(98.2) | 2(1.8) | |
| Amphotericin B | ≤0.12–4 | 1 | 1 | 107(98.2) | 2(1.8) | |
| Anidulafungin | 0.03–2 | 1 | 2 | 75(100) | ||
| Micafungin | 0.06–2 | 1 | 1 | 75(100) | ||
| Caspofungin | 0.06–1 | 0.5 | 0.5 | 75(100) | ||
| Posaconazole | ≤0.008–0.5 | 0.03 | 0.06 | 72(96) | 3(4) | |
| Voriconazole | ≤0.008–8 | ≤0.008 | 0.03 | 71(94.7) | 4(5.3) | |
| Itraconazole | ≤0.015–0.5 | 0.03 | 0.12 | 75(100) | ||
| Fluconazole | ≤0.12–256 | 0.5 | 2 | 71(94.7) | 4(5.3) | |
| 5-Flucytosine | ≤0.06->64 | ≤0.06 | 0.25 | 70(93.3) | 5(6.7) | |
| Amphotericin B | 0.25–2 | 0.5 | 1 | 75(100) | ||
| Anidulafungin | ≤0.015–0.25 | 0.03 | 0.12 | 38(97.4) | 1(2.6) | |
| Micafungin | ≤0.008–0.12 | 0.015 | 0.03 | 38(97.4) | 1(2.6) | |
| Caspofungin | 0.03–0.12 | 0.06 | 0.12 | 39(100) | ||
| Posaconazole | 0.03->8 | 0.5 | 2 | 35(89.7) | 4(10.3) | |
| Voriconazole | 0.015->8 | 0.25 | 1 | 28(71.8) | 11(28.2) | |
| Itraconazole | 0.03->16 | 0.5 | 1 | 36(92.3) | 3(7.7) | |
| Fluconazole | 0.5->256 | 8 | 32 | 36(92.3) | 3(7.7) | |
| 5-Flucytosine | ≤0.06->64 | ≤0.06 | ≤0.06 | 38(97.4) | 1(2.6) | |
| Amphotericin B | 0.25–4 | 1 | 1 | 38(97.4) | 1(2.6) | |
| Anidulafungin | ≤0.015–0.06 | ≤0.015 | ≤0.015 | |||
| Micafungin | 0.03–0.06 | 0.03 | 0.06 | |||
| Caspofungin | ≤0.008–0.12 | 0.06 | 0.06 | 29(100) | ||
| Posaconazole | 0.12->8 | 0.5 | 2 | 28(96.6) | 1(3.4) | |
| Voriconazole | 0.06->8 | 0.25 | 0.5 | 17(58.6) | 12(41.4) | |
| Itraconazole | 0.06->16 | 0.25 | 0.5 | |||
| Fluconazole | 2->256 | 8 | 16 | 13(44.5) | 16(55.2) | |
| 5-Flucytosine | ≤0.06->64 | 2 | 32 | |||
| Amphotericin B | 0.25–1 | 1 | 1 | |||
| Anidulafungin | >8 | >8 | >8 | |||
| Micafungin | >8 | >8 | >8 | |||
| Caspofungin | >8 | >8 | >8 | |||
| Posaconazole | 0.06–0.25 | 0.12 | 0.12 | |||
| Voriconazole | 0.03–0.06 | 0.03 | 0.06 | |||
| Itraconazole | 0.03–0.12 | 0.06 | 0.12 | |||
| Fluconazole | 2–8 | 4 | 4 | |||
| 5-Flucytosine | 0.5–4 | 2 | 4 | |||
| Amphotericin B | 0.5–1 | 0.5 | 1 | |||
| Other species (n=24)b | ||||||
| Anidulafungin | ≤0.015->8 | 1 | 2 | |||
| Micafungin | 0.015->8 | 0.12 | 0.5 | |||
| Caspofungin | 0.03->8 | 0.12 | 2 | |||
| Posaconazole | 0.015–1 | 0.25 | 1 | |||
| Voriconazole | ≤0.008->8 | 0.25 | >8 | |||
| Itraconazole | 0.03->16 | 0.25 | 1 | |||
| Fluconazole | 0.5->256 | 16 | >256 | |||
| 5-Flucytosine | ≤0.06->64 | 8 | 64 | |||
| Amphotericin B | ≤0.12–4 | 0.25 | 4 | |||
Note: aThis includes Candida parapsilosis sensu stricto (69 isolates), Candida metapsilosis (3 isolates), Candida orthopsilosis (3 isolates). bThis included Candida krusei (8 isolates), Candida guilliermondii (4 isolates), Candida haemulonii (4 isolates), Candida lusitaniae (1 isolate), Candida intermedia (1 isolate), Kodamaea ohmeri (3 isolates), Rhodotorula mucilaginosa (2 isolates) and Trichosporon asahii (1 isolate).
Abbreviations: S, Susceptible; SDD, Susceptible-dose dependent; I, Intermediate; WT, Wild-type; R, Resistant.