| Literature DB >> 31817393 |
Rana Zia Ur Rehman1, Silvia Del Din1, Jian Qing Shi2, Brook Galna1,3, Sue Lord1,4, Alison J Yarnall1,5, Yu Guan6, Lynn Rochester1,5.
Abstract
Early diagnosis of Parkinson's diseases (PD) is challenging; applying machine learning (ML) models to gait characteristics may support the classification process. Comparing performance of ML models used in various studies can be problematic due to different walking protocols and gait assessment systems. The objective of this study was to compare the impact of walking protocols and gait assessment systems on the performance of a support vector machine (SVM) and random forest (RF) for classification of PD. 93 PD and 103 controls performed two walking protocols at their normal pace: (i) four times along a 10 m walkway (intermittent walk-IW), (ii) walking for 2 minutes on a 25 m oval circuit (continuous walk-CW). 14 gait characteristics were extracted from two different systems (an instrumented walkway-GAITRite; and an accelerometer attached at the lower back-Axivity). SVM and RF were trained on normalized data (accounting for step velocity, gender, age and BMI) and evaluated using 10-fold cross validation with area under the curve (AUC). Overall performance was higher for both systems during CW compared to IW. SVM performed better than RF. With SVM, during CW Axivity significantly outperformed GAITRite (AUC: 87.83 ± 7.81% vs. 80.49 ± 9.85%); during IW systems performed similarly. These findings suggest that choice of testing protocol and sensing system may have a direct impact on ML PD classification results and highlight the need for standardization for wide scale implementation.Entities:
Keywords: GAITRite; Parkinson’s disease; SVM; accelerometer; classification; machine learning; multi-regression normalization; random forest classifier; wearables
Mesh:
Year: 2019 PMID: 31817393 PMCID: PMC6960714 DOI: 10.3390/s19245363
Source DB: PubMed Journal: Sensors (Basel) ISSN: 1424-8220 Impact factor: 3.576
Figure 1Layout of experimental setup and testing protocols, (a) 10 m intermittent walking test (IW); (b) 2 min continuous walking test (CW).
Demographic and clinical characteristics of the participants.
| Demographics | HC (n = 103) | PD (n = 93) |
|
|---|---|---|---|
| M/F | 49/54 | 59/34 |
|
| Age (years) | 72.3 ± 6.7 | 69.2 ± 10.1 |
|
| Height (m) | 1.7 ± 0.09 | 1.7 ± 0.09 | 0.623 |
| Mass (kg) | 78.6 ± 14.3 | 78.6 ± 15.9 | 0.999 |
| BMI (kg/m²) 1 | 27.2 ± 5.6 | 27.5 ± 4.7 | 0.750 |
| MMSE (0–30) 2 | 28.9 ± 1.9 | 28.4 ± 1.6 | 0.102 |
| ABCs (0–100)% 3 | 91.2 ± 13.8 | 80.6 ± 20.7 |
|
| LEDD, mg/day 4 | 397.7 ± 217.2 | ||
| Disease Duration (months) | 23.8 ± 4.2 | ||
| Hoehn & Yahr (n) | HY I: 8 | ||
| HY II: 71 | |||
| HY III: 14 | |||
| MDS-UPDRS III 5 | 32.4 ± 10.3 | ||
| (HY I: 17.4 ± 4.5) | |||
| (HY II: 32.9 ± 9.7) | |||
| (HY III: 38.1 ± 7.5) | |||
| Motor Phenotype (n) | 6 PIGD: 34 | ||
| 7 ID: 16 | |||
| 8 TD: 43 |
1 BMI: Body Mass Index; 2 MMSE: Mini–Mental State Examination; 3 ABC: Activities specific balance confidence scale; 4 LEDD: Levodopa equivalent daily dose; 5 MDS-UPDRS III: Movement Disorders Unified Parkinson’s Disease Rating Scale part III; 6 PIGD: Postural instability and gait disorder phenotype; 7 ID: Indeterminate phenotype; 8 TD: Tremor dominant phenotype. In bold significant p-values (p < 0.05).
MANOVA to check the effect of walking protocols and gait assessment systems on gait (* indicates interaction).
| Effect Assessment on Gait | MANOVA | ||
|---|---|---|---|
| Wilk’s Lambda | F | ||
| Group (HC & PD) | 0.803 | 14.198 | <0.001 |
| Walking Protocols | 0.463 | 67.337 | <0.001 |
| Gait Assessment Systems | 0.067 | 805.792 | <0.001 |
| Group * Protocol | 0.949 | 3.092 | <0.001 |
| Group * Systems | 0.853 | 9.991 | <0.001 |
| Protocols * Systems | 0.513 | 55.168 | <0.001 |
Mean comparison among PD and HC for gait characteristics obtained from walking protocols and assessment systems (significant normalized gait characteristics are highlighted in grey color, in bold significant p-values (p < 0.05) for normalized gait characteristics except step velocity).
| Gait Domains | Gait Characteristics | Intermittent Walk (IW) | Continuous Walk (CW) | ||||
|---|---|---|---|---|---|---|---|
| HC (n = 103) | PD (n = 93) | HC (n = 103) | PD (n = 93) | ||||
|
| |||||||
| Pace | Step Velocity (m/s) | 1.324 ± 0.153 | 1.252 ± 0.226 |
| 1.283 ± 0.155 | 1.186 ± 0.262 |
|
| Step Length (m) | 0.718 ± 0.094 | 0.717 ± 0.074 |
| 0.694 ± 0.121 | 0.690 ± 0.077 |
| |
| Swing Time Variability (s) | 0.064 ± 0.084 | 0.123 ± 0.144 |
| 0.037 ± 0.031 | 0.108 ± 0.082 | 0.058 | |
| Rhythm | Step Time (s) | 0.554 ± 0.052 | 0.614 ± 0.129 |
| 0.538 ± 0.046 | 0.609 ± 0.133 |
|
| Swing Time (s) | 0.394 ± 0.047 | 0.448 ± 0.116 |
| 0.386 ± 0.044 | 0.454 ± 0.125 |
| |
| Stance Time (s) | 0.705 ± 0.059 | 0.767 ± 0.141 |
| 0.689 ± 0.054 | 0.763 ± 0.144 |
| |
| Variability | Step Velocity Variability (m/s) | 0.174 ± 0.097 | 0.196 ± 0.078 | 0.273 | 0.137 ± 0.060 | 0.190 ± 0.076 |
|
| Step Length Variability (m) | 0.101 ± 0.060 | 0.126 ± 0.059 |
| 0.072 ± 0.034 | 0.109 ± 0.044 |
| |
| Step Time Variability (s) | 0.093 ± 0.103 | 0.162 ± 0.157 |
| 0.037 ± 0.033 | 0.114 ± 0.087 |
| |
| Stance Time Variability (s) | 0.094 ± 0.103 | 0.166 ± 0.158 |
| 0.039 ± 0.033 | 0.116 ± 0.088 |
| |
| Asymmetry | Step Time Asymmetry (s) | 0.031 ± 0.018 | 0.051 ± 0.034 | 0.610 | 0.021 ± 0.016 | 0.026 ± 0.025 | 0.268 |
| Swing Time Asymmetry (s) | 0.023 ± 0.017 | 0.039 ± 0.028 | 0.437 | 0.020 ± 0.018 | 0.023 ± 0.024 | 0.592 | |
| Stance Time Asymmetry (s) | 0.030 ± 0.019 | 0.044 ± 0.027 | 0.771 | 0.020 ± 0.018 | 0.024 ± 0.02 | 0.419 | |
| Postural Control | Step length Asymmetry (m) | 0.078 ± 0.053 | 0.119 ± 0.112 | 0.606 | 0.066 ± 0.052 | 0.126 ± 0.128 | 0.060 |
|
| |||||||
| Pace | Step Velocity (m/s) | 1.338 ± 0.198 | 1.194 ± 0.223 |
| 1.301 ± 0.192 | 1.135 ± 0.218 |
|
| Step Length (m) | 0.697 ± 0.084 | 0.636 ± 0.098 |
| 0.683 ± 0.083 | 0.616 ± 0.097 |
| |
| Swing Time Variability (s) | 0.013 ± 0.003 | 0.016 ± 0.008 |
| 0.013 ± 0.004 | 0.017 ± 0.009 |
| |
| Rhythm | Step Time (s) | 0.525 ± 0.045 | 0.538 ± 0.047 |
| 0.528 ± 0.044 | 0.548 ± 0.047 |
|
| Swing Time (s) | 0.385 ± 0.030 | 0.382 ± 0.033 |
| 0.385 ± 0.029 | 0.384 ± 0.031 |
| |
| Stance Time (s) | 0.665 ± 0.068 | 0.695 ± 0.072 |
| 0.674 ± 0.066 | 0.714 ± 0.074 |
| |
| Variability | Step Velocity Variability (m/s) | 0.051 ± 0.015 | 0.047 ± 0.014 | 0.946 | 0.050 ± 0.012 | 0.054 ± 0.014 |
|
| Step Length Variability (m) | 0.019 ± 0.006 | 0.020 ± 0.007 |
| 0.020 ± 0.006 | 0.023 ± 0.007 | 0.338 | |
| Step Time Variability (s) | 0.014 ± 0.004 | 0.016 ± 0.007 | 0.173 | 0.014 ± 0.004 | 0.018 ± 0.006 |
| |
| Stance Time Variability (s) | 0.016 ± 0.005 | 0.019 ± 0.011 | 0.260 | 0.017 ± 0.006 | 0.023 ± 0.012 |
| |
| Asymmetry | Step Time Asymmetry (s) | 0.011 ± 0.008 | 0.018 ± 0.018 |
| 0.012 ± 0.009 | 0.019 ± 0.022 |
|
| Swing Time Asymmetry (s) | 0.007 ± 0.006 | 0.014 ± 0.014 |
| 0.007 ± 0.006 | 0.014 ± 0.014 |
| |
| Stance Time Asymmetry (s) | 0.007 ± 0.006 | 0.014 ± 0.014 | 0.476 | 0.007 ± 0.006 | 0.015 ± 0.015 |
| |
| Postural Control | Step length Asymmetry (m) | 0.020 ± 0.016 | 0.022 ± 0.018 |
| 0.019 ± 0.015 | 0.022 ± 0.020 |
|
Importance of normalized gait characteristics in the classification of PD.
| Sensing System | Intermittent Walk | Continuous Walk | ||
|---|---|---|---|---|
| Characteristic | Importance | Characteristic | Importance | |
| Axivity | Mean Step Length | 0.22 | Step Velocity Variability | 1.10 |
| Mean Stance Time | 0.20 | Mean Swing Time | 0.72 | |
| Mean Swing Time | 0.15 | Mean Step Length | 0.49 | |
| Swing Time Variability | 0.14 | Stance Time Variability | 0.20 | |
| Mean Step Time | 0.07 | Step Length Variability | 0.12 | |
| GAITRite | Mean Step Time | 0.23 | Mean Step Length | 3.80 |
| Step Velocity Variability | 0.22 | Mean Step Time | 2.72 | |
| Step Length Variability | 0.15 | Stance Time Asymmetry | 1.21 | |
| Swing Time Variability | 0.14 | Mean Stance Time | 1.10 | |
| Mean Step Length | 0.09 | Swing Time Asymmetry | 0.72 | |
Figure 2Distribution of SVM classification performance after normalization of gait characteristics.
Figure 3Distribution of turning characteristics.