| Literature DB >> 31814764 |
Gang Wang1, Wan-Chao Zhong2, Yi-Hui Bi3, Si-Yue Tao4, Hai Zhu5, Hai-Xing Zhu6, A-Man Xu1.
Abstract
PURPOSE: PRDX (Peroxiredoxin) family has involved in breast cancer tumorigenesis from the evidence obtained from cell lines, human tissues and mouse models. Nonetheless, the diversified expression patterns, coupled with the prognostic values of PRDX family, still require explanation. This study aimed at investigating the clinical importance and biological of PRDXs in breast cancer. PATIENTS AND METHODS: Specimens of paraffin sections used for immunohistochemistry were collected from the hospital and the remaining patient information was retrieved from online databases. The expression and survival data of PRDXs in patients with breast cancer were from ONCOMINE, GEPIA, Kaplan-Meier Plotter. cBioPortal, Metascape, String, Cytoscape and DAVID were used to predict functions and pathways of the changes in PRDXs and their frequently altered neighbor genes. Immunohistochemistry was used to detect the expression of PRDXs in breast cancer.Entities:
Keywords: Kaplan-Meier plot; PRDXs; breast cancer; prognosis
Year: 2019 PMID: 31814764 PMCID: PMC6861534 DOI: 10.2147/CMAR.S229389
Source DB: PubMed Journal: Cancer Manag Res ISSN: 1179-1322 Impact factor: 3.989
Antibody Name, Company, Catalog And Concentration For Immunohistochemistry
| Antibody | Company | Catalog | Concentration |
|---|---|---|---|
| Anti-PRDX1 | Abcam | ab15571 | 1:500 |
| Anti-PRDX2 | Abcam | ab59539 | 1:500 |
| Anti-PRDX3 | Abcam | ab222807 | 1:100 |
| Anti-PRDX4 | Abcam | ab59542 | 1:500 |
| Anti-PRDX5 | Abcam | ab86086 | 1:500 |
| Anti-PRDX6 | Abcam | ab59543 | 1:500 |
| Goat Anti-Rabbit IgG H&L (HRP) | Abcam | ab205718 | 1:5000 |
Figure 1The expression of PRDX family in different types of cancers (ONCOMINE).
The Significant Changes Of PRDXs Expression In Transcription Level Between Different Types Of Breast Cancer And Normal Tissues (ONCOMINE Database)
| Types Of Breast Cancer vs Normal | Fold Change | P Value | Ref | ||
|---|---|---|---|---|---|
| PRDX1 | Lobular Breast Carcinoma vs Normal | 3.224 | 3.12E−10 | 13.370 | Zhao |
| Invasive Ductal Breast Carcinoma vs Normal | 3.531 | 3.92E−12 | 14.384 | Zhao | |
| Ductal Breast Carcinoma in Situ Epithelia vs Normal | 2.546 | 1.73E−7 | 8.385 | Ma | |
| Medullary Breast Carcinoma vs Normal | 2.373 | 2.47E−16 | 13.342 | Curtis | |
| Invasive Ductal Breast Carcinoma vs Normal | 2.001 | 5.59E−77 | 30.465 | Curtis | |
| PRDX2 | Invasive Ductal Breast Carcinoma vs Normal | 2.322 | 1.37E−4 | 7.022 | Zhao |
| PRDX3 | Invasive Breast Carcinoma Stroma vs Normal | 2.298 | 7.50E−12 | 10.011 | Finak |
| PRDX4 | Ductal Breast Carcinoma vs Normal | 2.103 | 1.71E−5 | 6.948 | Sorlie |
| Ductal Breast Carcinoma vs Normal | 2.189 | 1.79E−7 | 6.567 | Richardson | |
| Lobular Breast Carcinoma vs Normal | 2.035 | 3.43E−5 | 5.482 | Zhao | |
| Invasive Ductal Breast Carcinoma vs Normal | 2.468 | 3.95E−6 | 8.402 | Zhao | |
| Medullary Breast Carcinoma vs Normal | 2.008 | 5.86E−10 | 8.329 | Curtis | |
| PRDX5 | NA | NA | NA | NA | NA |
| PRDX6 | NA | NA | NA | NA | NA |
Figure 2The Boxplot (A) and Profile (B) of PRDX family’s expression in breast cancer (GEPIA).
Figure 3Correlation between PRDXs expression and tumor stage in breast cancer patients (GEPIA).
Figure 4The expression of PRDX family in breast cancer (IHC).
Figure 5The prognostic value of mRNA level of PRDXs in breast cancer patients (Kaplan-Meier plotter).
Figure 6PRDXs expression and mutation analysis in breast cancer (cBioPortal).
Figure 7The network for PRDXs and the 22 most frequently altered neighbor genes (cBioPortal).
Figure 8Heatmap of enriched terms across PRDXs and other 22 most frequently altered neighbor gene lists, colored by p-values (Metascape).
Figure 9Network of enriched terms: (A) Colored by cluster ID; (B) Colored by p-value (Metascape).
Figure 10The core modules of genes associated with the PRDXs.
Figure 11The functions of PRDXs and genes significantly associated with PRDXs alterations were predicted by analysis of KEGG (DAVID).