Literature DB >> 31812137

An artificial intelligence framework for automatic segmentation and volumetry of vestibular schwannomas from contrast-enhanced T1-weighted and high-resolution T2-weighted MRI.

Jonathan Shapey1,2,3, Guotai Wang1,3,4, Reuben Dorent3, Alexis Dimitriadis5, Wenqi Li3, Ian Paddick6, Neil Kitchen2,6, Sotirios Bisdas5, Shakeel R Saeed2,7,8, Sebastien Ourselin3, Robert Bradford2,6, Tom Vercauteren3.   

Abstract

OBJECTIVE: Automatic segmentation of vestibular schwannomas (VSs) from MRI could significantly improve clinical workflow and assist in patient management. Accurate tumor segmentation and volumetric measurements provide the best indicators to detect subtle VS growth, but current techniques are labor intensive and dedicated software is not readily available within the clinical setting. The authors aim to develop a novel artificial intelligence (AI) framework to be embedded in the clinical routine for automatic delineation and volumetry of VS.
METHODS: Imaging data (contrast-enhanced T1-weighted [ceT1] and high-resolution T2-weighted [hrT2] MR images) from all patients meeting the study's inclusion/exclusion criteria who had a single sporadic VS treated with Gamma Knife stereotactic radiosurgery were used to create a model. The authors developed a novel AI framework based on a 2.5D convolutional neural network (CNN) to exploit the different in-plane and through-plane resolutions encountered in standard clinical imaging protocols. They used a computational attention module to enable the CNN to focus on the small VS target and propose a supervision on the attention map for more accurate segmentation. The manually segmented target tumor volume (also tested for interobserver variability) was used as the ground truth for training and evaluation of the CNN. We quantitatively measured the Dice score, average symmetric surface distance (ASSD), and relative volume error (RVE) of the automatic segmentation results in comparison to manual segmentations to assess the model's accuracy.
RESULTS: Imaging data from all eligible patients (n = 243) were randomly split into 3 nonoverlapping groups for training (n = 177), hyperparameter tuning (n = 20), and testing (n = 46). Dice, ASSD, and RVE scores were measured on the testing set for the respective input data types as follows: ceT1 93.43%, 0.203 mm, 6.96%; hrT2 88.25%, 0.416 mm, 9.77%; combined ceT1/hrT2 93.68%, 0.199 mm, 7.03%. Given a margin of 5% for the Dice score, the automated method was shown to achieve statistically equivalent performance in comparison to an annotator using ceT1 images alone (p = 4e-13) and combined ceT1/hrT2 images (p = 7e-18) as inputs.
CONCLUSIONS: The authors developed a robust AI framework for automatically delineating and calculating VS tumor volume and have achieved excellent results, equivalent to those achieved by an independent human annotator. This promising AI technology has the potential to improve the management of patients with VS and potentially other brain tumors.

Entities:  

Keywords:  AI = artificial intelligence; ASSD = average symmetric surface distance; CNN = convolutional neural network; DL = deep learning; GK = Gamma Knife; HDL = hardness-weighted Dice loss; MRI; RVE = relative volume error; SRS = stereotactic radiosurgery; SpvA = supervised attention module; VS = vestibular schwannoma; artificial intelligence; ceT1 = contrast-enhanced T1-weighted; convolutional neural network; hrT2 = high-resolution T2-weighted; oncology; segmentation; tumor; vestibular schwannoma

Year:  2019        PMID: 31812137     DOI: 10.3171/2019.9.JNS191949

Source DB:  PubMed          Journal:  J Neurosurg        ISSN: 0022-3085            Impact factor:   5.115


  9 in total

1.  Automated objective surgical planning for lateral skull base tumors.

Authors:  A E Rajesh; J T Rubinstein; M Ferreira; A P Patel; R A Bly; G D Kohlberg
Journal:  Int J Comput Assist Radiol Surg       Date:  2022-01-28       Impact factor: 2.924

2.  Fully Automated 3D Vestibular Schwannoma Segmentation with and without Gadolinium-based Contrast Material: A Multicenter, Multivendor Study.

Authors:  Olaf M Neve; Yunjie Chen; Qian Tao; Stephan R Romeijn; Nick P de Boer; Willem Grootjans; Mark C Kruit; Boudewijn P F Lelieveldt; Jeroen C Jansen; Erik F Hensen; Berit M Verbist; Marius Staring
Journal:  Radiol Artif Intell       Date:  2022-06-22

Review 3.  Machine Learning for the Detection and Segmentation of Benign Tumors of the Central Nervous System: A Systematic Review.

Authors:  Paul Windisch; Carole Koechli; Susanne Rogers; Christina Schröder; Robert Förster; Daniel R Zwahlen; Stephan Bodis
Journal:  Cancers (Basel)       Date:  2022-05-27       Impact factor: 6.575

4.  Convolutional Neural Networks to Detect Vestibular Schwannomas on Single MRI Slices: A Feasibility Study.

Authors:  Carole Koechli; Erwin Vu; Philipp Sager; Lukas Näf; Tim Fischer; Paul M Putora; Felix Ehret; Christoph Fürweger; Christina Schröder; Robert Förster; Daniel R Zwahlen; Alexander Muacevic; Paul Windisch
Journal:  Cancers (Basel)       Date:  2022-04-20       Impact factor: 6.575

5.  Deep learning for glioblastoma segmentation using preoperative magnetic resonance imaging identifies volumetric features associated with survival.

Authors:  Yizhou Wan; Roushanak Rahmat; Stephen J Price
Journal:  Acta Neurochir (Wien)       Date:  2020-07-13       Impact factor: 2.216

6.  Applying artificial intelligence to longitudinal imaging analysis of vestibular schwannoma following radiosurgery.

Authors:  Cheng-Chia Lee; Wei-Kai Lee; Chih-Chun Wu; Chia-Feng Lu; Huai-Che Yang; Yu-Wei Chen; Wen-Yuh Chung; Yong-Sin Hu; Hsiu-Mei Wu; Yu-Te Wu; Wan-Yuo Guo
Journal:  Sci Rep       Date:  2021-02-04       Impact factor: 4.379

7.  Segmentation of vestibular schwannoma from MRI, an open annotated dataset and baseline algorithm.

Authors:  Jonathan Shapey; Aaron Kujawa; Reuben Dorent; Guotai Wang; Alexis Dimitriadis; Diana Grishchuk; Ian Paddick; Neil Kitchen; Robert Bradford; Shakeel R Saeed; Sotirios Bisdas; Sébastien Ourselin; Tom Vercauteren
Journal:  Sci Data       Date:  2021-10-28       Impact factor: 6.444

8.  Manual segmentation versus semi-automated segmentation for quantifying vestibular schwannoma volume on MRI.

Authors:  Hari McGrath; Peichao Li; Reuben Dorent; Robert Bradford; Shakeel Saeed; Sotirios Bisdas; Sebastien Ourselin; Jonathan Shapey; Tom Vercauteren
Journal:  Int J Comput Assist Radiol Surg       Date:  2020-07-16       Impact factor: 2.924

9.  The Application and Development of Deep Learning in Radiotherapy: A Systematic Review.

Authors:  Danju Huang; Han Bai; Li Wang; Yu Hou; Lan Li; Yaoxiong Xia; Zhirui Yan; Wenrui Chen; Li Chang; Wenhui Li
Journal:  Technol Cancer Res Treat       Date:  2021 Jan-Dec
  9 in total

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