Literature DB >> 31811631

View from an mRNP: The Roles of SR Proteins in Assembly, Maturation and Turnover.

Marius Wegener1, Michaela Müller-McNicoll2.   

Abstract

Serine- and arginine-rich proteins (SR proteins) are a family of multitasking RNA-binding proteins (RBPs) that are key determinants of messenger ribonucleoprotein (mRNP) formation, identity and fate. Apart from their essential functions in pre-mRNA splicing, SR proteins display additional pre- and post-splicing activities and connect nuclear and cytoplasmic gene expression machineries. Through changes in their post-translational modifications (PTMs) and their subcellular localization, they provide functional specificity and adjustability to mRNPs. Transcriptome-wide UV crosslinking and immunoprecipitation (CLIP-Seq) studies revealed that individual SR proteins are present in distinct mRNPs and act in specific pairs to regulate different gene expression programmes. Adopting an mRNP-centric viewpoint, we discuss the roles of SR proteins in the assembly, maturation, quality control and turnover of mRNPs and describe the mechanisms by which they integrate external signals, coordinate their multiple tasks and couple subsequent mRNA processing steps.

Entities:  

Keywords:  Gene expression; PTMs; RNA-binding proteins; SR proteins; Splicing; iCLIP; mRNPs

Year:  2019        PMID: 31811631     DOI: 10.1007/978-3-030-31434-7_3

Source DB:  PubMed          Journal:  Adv Exp Med Biol        ISSN: 0065-2598            Impact factor:   2.622


  11 in total

1.  Exon Definition Facilitates Reliable Control of Alternative Splicing in the RON Proto-Oncogene.

Authors:  Mihaela Enculescu; Simon Braun; Samarth Thonta Setty; Anke Busch; Kathi Zarnack; Julian König; Stefan Legewie
Journal:  Biophys J       Date:  2020-03-03       Impact factor: 4.033

2.  SRSF3 and SRSF7 modulate 3'UTR length through suppression or activation of proximal polyadenylation sites and regulation of CFIm levels.

Authors:  Oliver Daniel Schwich; Nicole Blümel; Mario Keller; Marius Wegener; Samarth Thonta Setty; Melinda Elaine Brunstein; Ina Poser; Igor Ruiz De Los Mozos; Beatrix Suess; Christian Münch; François McNicoll; Kathi Zarnack; Michaela Müller-McNicoll
Journal:  Genome Biol       Date:  2021-03-11       Impact factor: 13.583

3.  Nuclear mRNA maturation and mRNA export control: from trypanosomes to opisthokonts.

Authors:  Susanne Kramer
Journal:  Parasitology       Date:  2021-01-19       Impact factor: 3.234

Review 4.  Nuclear mRNA Quality Control and Cytoplasmic NMD Are Linked by the Guard Proteins Gbp2 and Hrb1.

Authors:  Yen-Yun Lu; Heike Krebber
Journal:  Int J Mol Sci       Date:  2021-10-19       Impact factor: 5.923

Review 5.  RNA-Binding Proteins as Regulators of Internal Initiation of Viral mRNA Translation.

Authors:  Brenda López-Ulloa; Yazmín Fuentes; Magdalena S Pizarro-Ortega; Marcelo López-Lastra
Journal:  Viruses       Date:  2022-01-19       Impact factor: 5.048

6.  Nucleocapsid protein of SARS-CoV-2 phase separates into RNA-rich polymerase-containing condensates.

Authors:  Adriana Savastano; Alain Ibáñez de Opakua; Marija Rankovic; Markus Zweckstetter
Journal:  Nat Commun       Date:  2020-11-27       Impact factor: 14.919

Review 7.  Dynamic mRNP Remodeling in Response to Internal and External Stimuli.

Authors:  Kathi Zarnack; Sureshkumar Balasubramanian; Michael P Gantier; Vladislav Kunetsky; Michael Kracht; M Lienhard Schmitz; Katja Sträßer
Journal:  Biomolecules       Date:  2020-09-11

8.  SARS-CoV-2 genomes from Saudi Arabia implicate nucleocapsid mutations in host response and increased viral load.

Authors:  Tobias Mourier; Muhammad Shuaib; Sharif Hala; Sara Mfarrej; Fadwa Alofi; Raeece Naeem; Afrah Alsomali; David Jorgensen; Amit Kumar Subudhi; Fathia Ben Rached; Qingtian Guan; Rahul P Salunke; Amanda Ooi; Luke Esau; Olga Douvropoulou; Raushan Nugmanova; Sadhasivam Perumal; Huoming Zhang; Issaac Rajan; Awad Al-Omari; Samer Salih; Abbas Shamsan; Abbas Al Mutair; Jumana Taha; Abdulaziz Alahmadi; Nashwa Khotani; Abdelrahman Alhamss; Ahmed Mahmoud; Khaled Alquthami; Abdullah Dageeg; Asim Khogeer; Anwar M Hashem; Paula Moraga; Eric Volz; Naif Almontashiri; Arnab Pain
Journal:  Nat Commun       Date:  2022-02-01       Impact factor: 14.919

9.  Nucleo-cytoplasmic shuttling of splicing factor SRSF1 is required for development and cilia function.

Authors:  Fiona Haward; Magdalena M Maslon; Patricia L Yeyati; Nicolas Bellora; Jan N Hansen; Stuart Aitken; Jennifer Lawson; Alex von Kriegsheim; Dagmar Wachten; Pleasantine Mill; Ian R Adams; Javier F Caceres
Journal:  Elife       Date:  2021-08-02       Impact factor: 8.140

10.  The RNA-binding protein MEX3A is a prognostic factor and regulator of resistance to gemcitabine in pancreatic ductal adenocarcinoma.

Authors:  Valentina Panzeri; Isabella Manni; Alessia Capone; Chiara Naro; Andrea Sacconi; Silvia Di Agostino; Luisa de Latouliere; Andrea Montori; Emanuela Pilozzi; Giulia Piaggio; Gabriele Capurso; Claudio Sette
Journal:  Mol Oncol       Date:  2020-11-24       Impact factor: 7.449

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