Literature DB >> 31810005

Uncertainty and interpretability in convolutional neural networks for semantic segmentation of colorectal polyps.

Kristoffer Wickstrøm1, Michael Kampffmeyer2, Robert Jenssen2.   

Abstract

Colorectal polyps are known to be potential precursors to colorectal cancer, which is one of the leading causes of cancer-related deaths on a global scale. Early detection and prevention of colorectal cancer is primarily enabled through manual screenings, where the intestines of a patient is visually examined. Such a procedure can be challenging and exhausting for the person performing the screening. This has resulted in numerous studies on designing automatic systems aimed at supporting physicians during the examination. Recently, such automatic systems have seen a significant improvement as a result of an increasing amount of publicly available colorectal imagery and advances in deep learning research for object image recognition. Specifically, decision support systems based on Convolutional Neural Networks (CNNs) have demonstrated state-of-the-art performance on both detection and segmentation of colorectal polyps. However, CNN-based models need to not only be precise in order to be helpful in a medical context. In addition, interpretability and uncertainty in predictions must be well understood. In this paper, we develop and evaluate recent advances in uncertainty estimation and model interpretability in the context of semantic segmentation of polyps from colonoscopy images. Furthermore, we propose a novel method for estimating the uncertainty associated with important features in the input and demonstrate how interpretability and uncertainty can be modeled in DSSs for semantic segmentation of colorectal polyps. Results indicate that deep models are utilizing the shape and edge information of polyps to make their prediction. Moreover, inaccurate predictions show a higher degree of uncertainty compared to precise predictions.
Copyright © 2019. Published by Elsevier B.V.

Entities:  

Keywords:  Decision support systems; Fully convolutional networks; Guided backpropagation; Monte carlo dropout; Monte carlo guided backpropagation; Polyp segmentation

Mesh:

Year:  2019        PMID: 31810005     DOI: 10.1016/j.media.2019.101619

Source DB:  PubMed          Journal:  Med Image Anal        ISSN: 1361-8415            Impact factor:   8.545


  5 in total

1.  Automated Classification and Segmentation in Colorectal Images Based on Self-Paced Transfer Network.

Authors:  Yao Yao; Shuiping Gou; Ru Tian; Xiangrong Zhang; Shuixiang He
Journal:  Biomed Res Int       Date:  2021-01-20       Impact factor: 3.411

2.  Automatic Detection and Segmentation of Colorectal Cancer with Deep Residual Convolutional Neural Network.

Authors:  A Akilandeswari; D Sungeetha; Christeena Joseph; K Thaiyalnayaki; K Baskaran; R Jothi Ramalingam; Hamad Al-Lohedan; Dhaifallah M Al-Dhayan; Muthusamy Karnan; Kibrom Meansbo Hadish
Journal:  Evid Based Complement Alternat Med       Date:  2022-03-17       Impact factor: 2.629

3.  Artificial Intelligence for Colonoscopy: Past, Present, and Future.

Authors:  Wallapak Tavanapong; JungHwan Oh; Michael A Riegler; Mohammed Khaleel; Bhuvan Mittal; Piet C de Groen
Journal:  IEEE J Biomed Health Inform       Date:  2022-08-11       Impact factor: 7.021

4.  A deep learning method for translating 3DCT to SPECT ventilation imaging: First comparison with 81m Kr-gas SPECT ventilation imaging.

Authors:  Tomohiro Kajikawa; Noriyuki Kadoya; Yosuke Maehara; Hiroshi Miura; Yoshiyuki Katsuta; Shinsuke Nagasawa; Gen Suzuki; Hideya Yamazaki; Nagara Tamaki; Kei Yamada
Journal:  Med Phys       Date:  2022-05-17       Impact factor: 4.506

5.  Enhanced Image-Based Endoscopic Pathological Site Classification Using an Ensemble of Deep Learning Models.

Authors:  Dat Tien Nguyen; Min Beom Lee; Tuyen Danh Pham; Ganbayar Batchuluun; Muhammad Arsalan; Kang Ryoung Park
Journal:  Sensors (Basel)       Date:  2020-10-22       Impact factor: 3.576

  5 in total

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