| Literature DB >> 31808996 |
Charles A Brunette1, Stephen J Miller1, Nilla Majahalme1, Cynthia Hau1, Lauren MacMullen1, Sanjay Advani1, Sophie A Ludin1,2, Andrew J Zimolzak1,3,4, Jason L Vassy1,5,6.
Abstract
Pragmatic clinical trials (PCTs) have an established presence in clinical research and yet have only recently garnered attention within the landscape of genomic medicine. Using the PRagmatic-Explanatory Continuum Indicator Summary 2 (PRECIS-2) as a framework, this paper illustrates the application of PCT principles to The Integrating Pharmacogenetics In Clinical Care (I-PICC) Study, a trial of pharmacogenetic testing prior to statin initiation for cardiovascular disease prevention in primary care. The trial achieved high engagement with providers (85% enrolled of those approached) and enrolled a representative sample of participants for which statin therapy would be recommended. The I-PICC Study has a high level of pragmatism, which should enhance the generalizability of its findings. The PRECIS-2 may be useful in the design and evaluation of PCTs of genomic medicine interventions, contributing to the generation of evidence that can bridge the gap between genomics innovation and clinical adoption.Entities:
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Year: 2019 PMID: 31808996 PMCID: PMC7070795 DOI: 10.1111/cts.12723
Source DB: PubMed Journal: Clin Transl Sci ISSN: 1752-8054 Impact factor: 4.689
Figure 1Study timeline for the Integrating Pharmacogenetics in Clinical Care Study. Risk scores are 10‐year CVD risk scores as calculated using American College of Cardiology/American Heart Association Pooled Cohort Risk Assessment Equations.22 *10‐year CVD risk scores calculated for 1,455 patients and added to potentially eligible patient database (not including African American women). **10‐year CVD risk scores calculated for 1,019 additional patients between February 8, 2018, and February 27, 2018, and added to potentially eligible patient database (including patients from all demographic backgrounds). ***First date of regular 10‐year CVD risk score calculations begin on a daily basis for potentially eligible patients using the birthday parity method as described by Vassy et al.21 CVD, cardiovascular disease; EHR, electronic health record; IRB, Institutional Review Board.
PRECIS‐2 domains and pragmatism assessment for the design of the I‐PICC Study
| Domain | Domain description | Assessment of pragmatism | Rationale for PRECIS‐2 scoring of I‐PICC Study | Score |
|---|---|---|---|---|
| Eligibility | Specifies inclusion and exclusion criteria for the trial and frames the target population(s) for which its results are intended to apply | Are participants in the trial similar to those who would receive the intervention if it were available in usual care? | All primary care and women's health providers with prescribing privileges, except residents, are eligible for participation. Patient eligibility criteria are overall rather inclusive of the majority of patients for whom preemptive | 4 |
| Recruitment | Outlines the steps for the identification, consent, and enrollment of participants into the trial | How much extra effort is made to recruit participants into the trial above what would occur in usual care? | The trial leverages available data, informatics, and clinical resources at VABHS to recruit and enroll participants in the context of primary care. Recruitment effort is minimally greater than what occurs in usual care, including use of the EHR to consent providers and enroll patients and the sending of a recruitment letter and brief consent telephone call (< 5 minutes) to patients. | 4 |
| Setting | Context under which the trial is carried out, including factors such as geographic location and clinical infrastructure of the study site(s) | How different is the setting of the trial and the usual care setting? | The trial embeds | 4 |
| Organization | Structure and delivery of the intervention, including the clinical resources required to provide the intervention | How different are the resources, provider expertise, and organization of care delivery in the intervention arm of the trial and usual care? | Beyond the intervention, there is no difference between the delivery of care in the trial and usual care. No specialized training is administered to providers, no additional clinical staff is required, and study staff integrated the intervention into the EHR and primary care setting using available data, informatics, and clinical resources. | 5 |
| Flexibility in delivery | How the trial intervention is delivered to study participants | How different is the flexibility in how the intervention is delivered and the flexibility likely in usual care? | No specified protocol is used for the delivery of | 5 |
| Flexibility in adherence | How closely study participants are monitored for compliance to the trial intervention and the measures used to maintain or improve adherence | How different is the flexibility in how participants must adhere to the intervention and the flexibility likely in usual care? | Participant adherence to the study intervention is not monitored or required. Provider adherence to CPIC guidelines for statin prescribing is encouraged but not protocolized (secondary outcome). Patients may adhere or not to any clinical recommendation associated with his or her | 5 |
| Follow‐up | The rigor of measurement and amount of contact between the study staff and trial participants for the purposes of event tracking and data collection | How different is the intensity of follow‐up of participants in the trial and the likely follow‐up in usual care? | The intensity of participant follow‐up is minimally greater than what might occur in usual care. Providers receive no contact beyond notification of their patients' | 4 |
| Primary outcome | The main variable to be measured for use in assessing the effect of the study intervention | To what extent is the trial's primary outcome relevant to participants? | The primary outcome is change in LDL‐C (12‐month LDL‐C minus baseline LDL‐C). LDL‐C is a clinically relevant biomarker, and well‐validated proxy for CVD risk. As a surrogate, it is not immediately relevant to patients, but is considered exceptionally meaningful to providers and policymakers. | 3 |
| Primary analysis | The approach used for the analysis of final results | To what extent are all data included in the analysis of the primary outcome? | The primary outcome will be analyzed using an intention‐to‐treat approach. No participant data will be excluded on the basis of intervention compliance or recruitment volume thresholds (i.e., a provider who signed only one order). | 5 |
Adapted from Ford and Norrie 201610 and Loudon et al. 201515. Domain scores range from 1 (very explanatory) to 5 (very pragmatic).
CPIC, Clinical Pharmacogenetics Implementation Consortium; CVD, cardiovascular disease; EHR, electronic health record; I‐PICC, Integrating Pharmacogenetics in Clinical Care; LDL‐C, low‐density lipoprotein cholesterol; PRECIS‐2, PRagmatic‐Explanatory Continuum Indicator Summary 2; VABHS, Veterans Affairs Boston Healthcare System.
Figure 2The Integrating Pharmacogenetics in Clinical Care (I‐PICC) Study design and workflow. Study staff, with clinical trial management software support, interface directly with providers, patients, the electronic health records (EHRs), and the corporate data warehouse (CDW) to recruit and enroll participants, introduce SLCO1B1 pharmacogenetic (PGx) testing and its results, and track patient clinical outcomes within the context of routine care.
Figure 3PRagmatic‐Explanatory Continuum Indicator Summary 2 (PRECIS‐2) rating scale (left) and mapping of the Integrating Pharmacogenetics in Clinical Care study design to the PRECIS‐2 wheel (right).
Patient characteristics in the I‐PICC study
| All VABHS patients aged 40–75 years | I‐PICC eligible patients | I‐PICC declined patients | I‐PICC consented, not enrolled patients | I‐PICC enrolled patients | ||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Mean | SD | Mean | SD | Mean | SD | Mean | SD | Mean | SD | |
| Age (40–75 years): | 63.1 | 9.4 | 63.3 | 8.2 | 65.3 | 7.1 | 63.7 | 8.1 | 64.1 | 7.8 |
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| 20,959 | 6,245 | 433 | 492 | 408 | ||||||
| Sex | ||||||||||
| Female | 1,406 | 6.7 | 293 | 4.7 | 18 | 4.2 | 25 | 5.1 | 25 | 6.1 |
| Race | ||||||||||
| American Indian/Alaskan Native | 88 | 0.4 | 32 | 0.5 | 5 | 1.2 | 3 | 0.6 | 1 | 0.3 |
| Asian | 92 | 0.4 | 15 | 0.2 | 0 | 0.0 | 1 | 0.2 | 1 | 0.3 |
| Black/African American | 2,287 | 10.9 | 826 | 13.2 | 62 | 14.3 | 67 | 13.6 | 50 | 12.3 |
| Native Hawaiian/Pacific Islander | 43 | 0.2 | 11 | 0.2 | 1 | 0.2 | 1 | 0.2 | 0 | 0.0 |
| White | 17,548 | 83.7 | 5,053 | 80.9 | 347 | 80.1 | 407 | 82.7 | 341 | 83.6 |
| Multiracial | 107 | 0.5 | 30 | 0.5 | 2 | 0.5 | 2 | 0.4 | 4 | 1.0 |
| Unknown/declined | 794 | 3.8 | 278 | 4.5 | 16 | 3.7 | 11 | 2.2 | 11 | 2.7 |
| Ethnicity | ||||||||||
| Hispanic or Latino | 527 | 2.5 | 150 | 2.4 | 13 | 3.0 | 7 | 1.7 | 8 | 2.0 |
| Smoking status | ||||||||||
| Smoker | 7,140 | 34.1 | 2,537 | 40.6 | 147 | 33.9 | 192 | 39.0 | 137 | 33.6 |
| ACC/AHA risk criteria | ||||||||||
| Existing CVD | 6,339 | 30.2 | 1,038 | 16.6 | 98 | 22.6 | 102 | 20.7 | 98 | 24.0 |
| LDL‐C ≥190 mg/dL | 1,944 | 9.3 | 242 | 3.9 | 17 | 3.9 | 12 | 2.4 | 11 | 2.7 |
| Diabetes | 6,329 | 30.2 | 1,205 | 19.3 | 111 | 25.6 | 101 | 20.5 | 98 | 24.0 |
| 10‐year CVD risk ≥ 7.5% | 16,764 | 80.0 | 5,871 | 94.0 | 413 | 95.4 | 463 | 94.1 | 367 | 90.0 |
Patient samples derived during the study recruitment and enrollment period between August 1, 2016, and July 17, 2018. Individual patients may be included in multiple samples.
ACC/AHA, American College of Cardiology/American Heart Association; CVD, cardiovascular disease; I‐PICC, Integrating Pharmacogenetics in Clinical Care; LDL‐C, low‐density lipoprotein cholesterol; VABHS, Veterans Affairs Boston Healthcare System.
This sample matched on age and existence of an active relationship with a primary care provider during period of study recruitment and enrollment. Of these, 11,766 (56%) had been prescribed a statin prior to the study period.
Eligible sample based on I‐PICC Study eligibility criteria (age, no history of statin use, ACC/AHA risk criteria,22 receiving care at VABHS for at least 6 months, and active relationship with a primary care provider) at any time during the period of study recruitment and enrollment.
By design, patients consent to be considered for enrollment but are only enrolled if/when their provider signs an order for a pharmacogenetic test to be performed on an existing clinical blood sample.
Patients may satisfy any one of multiple ACC/AHA risk criteria.
Figure 4Average patient enrollment per week between December 13, 2016, and July 17, 2018, for the Integrating Pharmacogenetics in Clinical Care (I‐PICC) Study. Time segments are separated by modifications to the I‐PICC Study recruitment design and workflow after first patient enrollment. Risk scores are 10‐year CVD risk scores as calculated using American College of Cardiology/American Heart Association Pooled Cohort Risk Assessment Equations.22 Regular CVD risk score calculations refer to the daily generation of 10‐year CVD risk scores using the birthday parity method as described by Vassy et al.21 CVD, cardiovascular disease.
Figure 5Provider engagement in the Integrating Pharmacogenetics in Clinical Care Study SLCO1B1 genetic testing intervention. Five hundred fourteen total SLCO1B1 genetic test orders were distributed by study staff to 41 enrolled providers between December 13, 2016, and July 17, 2018. *There were 425 (83%) orders (including orders on both adequate and inadequate specimens) that were signed. **Eighty‐nine (17%) orders were declined or not acted upon within seven days of collection, the maximum timeframe in which the Veterans Affairs Boston Healthcare System laboratory retains clinical specimens for assessment.