| Literature DB >> 31808612 |
Qi Sun1,2,3, Xizhu Xu4, Jie Zhang1, Ming Sun1, Qiuyue Tian1, Qihuan Li1, Weijie Cao1, Xiaoyu Zhang1, Hao Wang1, Jiaonan Liu1, Jinxia Zhang1, Xiaoni Meng1, Lijuan Wu1, Manshu Song1, Hongqi Liu5, Wei Wang1,4,6, Youxin Wang1.
Abstract
Suboptimal health status (SHS), a physical state between health and disease, is a subclinical and reversible stage of chronic disease. Previous studies have shown alterations in the intestinal microbiota in patients with some chronic diseases. This study aimed to investigate the association between SHS and intestinal microbiota in a case-control study with 50 SHS individuals and 50 matched healthy controls. Intestinal microbiota was analysed by MiSeq 250PE. Alpha diversity of intestinal microbiota in SHS individuals was higher compared with that of healthy controls (Simpson index, W = 2238, P = .048). Beta diversity was different between SHS and healthy controls (P = .018). At the phylum level, the relative abundance of Verrucomicrobia was higher in the SHS group than that in the controls (W = 2201, P = .049). Compared with that of the control group, nine genera were significantly higher and five genera were lower in abundance in the SHS group (all P < .05). The intestinal microbiota, analysed by a random forest model, was able to distinguish individuals with SHS from the controls, with an area under the curve of 0.79 (95% confidence interval: 0.77-0.81). We demonstrated that the alteration of intestinal microbiota occurs with SHS, an early stage of disease, which might shed light on the importance of intestinal microbiota in the primary prevention of noncommunicable chronic diseases.Entities:
Keywords: 16S rRNA; LEfSe analysis; intestinal microbiota; random forest tree; suboptimal health status
Mesh:
Year: 2019 PMID: 31808612 PMCID: PMC6991644 DOI: 10.1111/jcmm.14880
Source DB: PubMed Journal: J Cell Mol Med ISSN: 1582-1838 Impact factor: 5.310
Characteristics of subjects in SHS and healthy groups
| Variables | Healthy group | SHS group |
|
|
|---|---|---|---|---|
| Age (y) | 18.96 ± 0.64 | 19.00 ± 0.73 | −0.29a | .77 |
| Gender, male (%) | 11 (22) | 10 (20) | 0.06b | .81 |
| BMI (kg/m2) | 22.03 ± 2.72 | 21.67 ± 3.03 | 0.62a | .53 |
| WHR | 0.77 ± 0.05 | 0.77 ± 0.05 | 0.41a | .68 |
| Sleeping time (h) | 7.21 ± 1.20 | 6.92 ± 1.48 | −1.06a | .29 |
| Physical activity, n (%) | 3.58b | .17 | ||
| Inactive | 1 (2) | 4 (8) | ||
| Moderately | 15 (30) | 20 (40) | ||
| Very active | 34 (68) | 26 (52) | ||
| Family income, n (%) | 0.56b | .75 | ||
| ≤¥3000 | 22 (44) | 21 (42) | ||
| ¥3001‐5000 | 19 (38) | 17 (34) | ||
| ≥¥5001 | 9 (18) | 12 (24) | ||
| No smoking, n (%) | 50 (100) | 49 (98) | 1.01b | .31 |
| No drinking, n (%) | 50 (100) | 50 (100) | – | – |
| SBP (mm Hg) | 120.90 ± 11.51 | 118.30 ± 12.54 | 1.06a | .29 |
| DBP (mm Hg) | 77.18 ± 8.06 | 75.71 ± 10.80 | 0.77a | .45 |
| ALT (μg/L) | 15.58 ± 9.14 | 15.48 ± 8.54 | 0.06a | .96 |
| AST (μg/L) | 21.84 ± 5.63 | 22.38 ± 5.91 | −0.46a | .65 |
| CKMB (μg/L) | 9.26 ± 2.63 | 7.18 ± 4.46 | 0.11a | .91 |
| ALP (μg/L) | 62.17 ± 15.27 | 62.76 ± 18.20 | −0.17a | .86 |
| TBIL (μg/L) | 15.60 ± 6.69 | 14.07 ± 5.89 | 1.19a | .24 |
| LDH (μg/L) | 147.40 ± 23.08 | 142.70 ± 21.96 | 1.02a | .31 |
| Total score of SHSQ‐25 | 17.58 ± 8.09 | 42.88 ± 7.24 | −16.48a | <.0001 |
| Fatigue score | 7.16 ± 3.48 | 16.70 ± 2.88 | −14.92a | <.0001 |
| Cardiovascular system score | 0.44 ± 0.88 | 3.42 ± 2.15 | −9.07a | <.0001 |
| Digestive tract score | 1.72 ± 1.55 | 4.50 ± 1.99 | −7.78a | <.0001 |
| Immune system score | 2.68 ± 1.43 | 5.08 ± 1.60 | −7.89a | <.0001 |
| Mental status score | 5.58 ± 3.41 | 13.18 ± 4.20 | −9.94a | <.0001 |
Abbreviations: ¥, Chinese Yuan; ALP, alkaline phosphatase; ALT, alanine aminotransferase; AST, aspartate aminotransferase; BMI, body mass index; CKMB, creatine kinase isoenzymes; DBP, diastolic blood pressure; LDH, lactate dehydrogenase; SBP, systolic blood pressure; SHS, suboptimal health status; SHSQ‐25, Suboptimal Health Status Questionnaire‐25; TBIL, total bilirubin; WHR, waist‐to‐hip ratio.
Continuous variables were expressed as mean ± standard deviation, while discrete variables were represented as number (proportion); a, t value; b, χ 2 value.
Figure 1Rarefaction curves and comparison of alpha diversity between the gut microbiota of SHS and controls (50 cases & 50 controls). Rarefaction curves for the observed species of healthy individuals and SHS individuals (A). Five indices were used to represent the alpha diversity, which is Observed species (B), Simpson index (C), PD whole tree (D), Chao1 index (E) and Shannon index (F). PD indicates phylogenetic diversity
Figure 2Principal coordinate analysis illustrating the grouping patterns of the SHS and control individuals based on the unweighted UniFrac (A) (P = .145) and weighted UniFrac (B) distances (50 cases & 50 controls, P = .018)
Figure 3Composition of the intestinal microbiota of healthy individuals and SHS patients in phylum level (A) and family‐level (B) gut microbial taxa (50 cases & 50 controls)
Figure 4Phylogenetic dendrogram of biomarker bacteria between SHS and control groups (50 cases & 50 controls)
Figure 5Linear Discriminant Analysis (LDA) score of LEfSe analysis between SHS and control groups (50 cases & 50 controls, LDA score ≥2)
Figure 6Receiver operating characteristic (ROC) curve analysis of random forest analysis in the diagnosis of SHS
Confusion matrix for random forest analysis
| Source | Predicted | |
|---|---|---|
| Controls | SHS | |
| Controls | 37.58 | 13.44 |
| SHS | 12.60 | 36.38 |
Values are presented as percentage.
Abbreviation: SHS, suboptimal health status.