| Literature DB >> 31807177 |
Chunbo Zhuang1, Pei Wang2, Ting Sun1, Lei Zheng1, Liang Ming1.
Abstract
Annexins are a superfamily of calcium-dependent phospholipid-binding proteins that are implicated in a wide range of biological processes. The annexin superfamily comprises 13 members in humans (ANXAs), the majority of which are frequently dysregulated in cancer. However, the expression patterns and prognostic values of ANXAs in liver cancer are currently largely unknown. The present study aimed to analyze the expression levels of ANXAs and survival data in patients with liver cancer from the Oncomine, GEPIA, Kaplan-Meier plotter and cBioPortal for Cancer Genomics databases. The results demonstrated that ANXA1, A2, A3, A4 and A5 were upregulated, whereas ANXA10 was downregulated in liver cancer compared with normal liver tissues. The expression of ANXA10 was associated with pathological stage. High expression levels of ANXA2 and A5 were significantly associated with poor overall survival (OS) rate whereas ANXA7 and A10 were associated with increased OS. The prognostic values of ANXAs in liver cancer were determined based on sex and clinical stage, which revealed that ANXA2, A5, A7 and A10 were associated with OS in male, but not in female patients. In addition, the potential biological functions of ANXAs were identified by Gene Ontology functional annotation and Kyoto Encyclopedia of Genes Genomes pathway analysis; the results demonstrated that ANXAs may serve a role in liver cancer through the neuroactive ligand-receptor interaction pathway. In conclusion, the results of the present study suggested that ANXA1, A2, A3, A4, A5 and A10 may be potential therapeutic targets for liver cancer treatment, and that ANXA2, A5, A7 and A10 may be potential prognostic biomarkers of liver cancer. Copyright: © Zhuang et al.Entities:
Keywords: GEPIA; Kaplan-Meier plotter; Oncomine; annexins; liver cancer; prognosis
Year: 2019 PMID: 31807177 PMCID: PMC6876331 DOI: 10.3892/ol.2019.11025
Source DB: PubMed Journal: Oncol Lett ISSN: 1792-1074 Impact factor: 2.967
Nomenclature and characterization of the ANXAs.
| ANXA | Symbol | Synonyms | Chromosomal location | Mass, Da (length, a.a.) |
|---|---|---|---|---|
| Annexin A1 | ANXA1 | ANX1, LPC1 | 9q21.13 | 38,714 (346) |
| Annexin A2 | ANXA2 | ANX2, ANX2L4, CAL1H, LPC2, LIP2 | 15q22.2 | 38,694 (339) |
| Annexin A3 | ANXA3 | ANX3 | 4q21.21 | 36,375 (323) |
| Annexin A4 | ANXA4 | ANX4 | 2p13.3 | 35,883 (319) |
| Annexin A5 | ANXA5 | ANX5, ENX2 | 4q27 | 35,937 (320) |
| Annexin A6 | ANXA6 | ANX6 | 5q33.1 | 75,873 (673) |
| Annexin A7 | ANXA7 | ANX7 | 10q22.2 | 52,739 (488) |
| Annexin A8 | ANXA8 | ANX8 | 10q11.22 | 30,693 (276) |
| Annexin A8 Like 1 | ANXA8L1 | ANXA8L2 | 10q11.22 | 36,879 (327) |
| Annexin A9 | ANXA9 | ANX31 | 1q21.3 | 38,364 (345) |
| Annexin A10 | ANXA10 | ANX14 | 4q32.3 | 37,278 (324) |
| Annexin A11 | ANXA11 | ANX11 | 10q22.3 | 54,390 (505) |
| Annexin A13 | ANXA13 | ANX13 | 8q24.13 | 35,463 (316) |
Figure 1.mRNA levels of ANXAs in different types of cancer, generated from the Oncomine database. The number of datasets with statistically significant (P<0.01) were indicated. Blue represents downregulated and red represents upregulated genes (Cancer vs. corresponding normal tissues). The numbers represent the number of datasets with differentially expressed genes.
Significant changes of ANXA expression at the transcriptional level between liver cancer and normal liver tissues using the Oncomine database.
| ANXA | Comparison | Fold change | P-value | t-test | Database | (Refs.) |
|---|---|---|---|---|---|---|
| ANXA1 | HCC vs. Normal | 5.649 | 1.60×10−13 | 9.880 | Mas | ( |
| ANXA2 | HCC vs. Normal | 3.506 | 1.10×10−65 | 20.365 | Roessler2 | ( |
| HCC vs. Normal | 2.409 | 1.28×10−10 | 8.629 | Mas | ( | |
| HCC vs. Normal | 3.528 | 2.69×10−7 | 6.044 | Roessler | ( | |
| HCC vs. Normal | 2.350 | 2.78×10−4 | 4.128 | Wurmbach | ( | |
| ANXA3 | HCC vs. Normal | 5.253 | 2.18×10−28 | 17.617 | Mas | ( |
| ANXA4 | HCC vs. Normal | 2.270 | 1.03×10−11 | 8.673 | Mas | ( |
| ANXA10 | HCC vs. Normal | −10.711 | 1.36×10−10 | −8.183 | Wurmbach | ( |
| HCC vs. Normal | −5.586 | 2.50×10−69 | −22.733 | Roessler2 | ( | |
| HCC vs. Normal | −6.439 | 8.55×10−8 | −7.275 | Roessler | ( |
HCC, hepatocellular carcinoma.
Figure 2.mRNA expressions of ANXAs in liver cancer and normal tissues as accessed by GEPIA database. *|Log2FC|>1 and P<0.01.
Figure 3.One-way ANOVA was used to test the association between ANXAs expression and tumor stage in liver cancer (GEPIA database). The Pr (
Figure 4.Prognostic value of ANXAs in Kaplan-Meier plotter. (A) Prognostic HRs and (B-N) survival curves of individual ANXAs plotted in liver cancer. HR, hazard ratio.
Association between ANXAs and the sex of patients with liver cancer.
| ANXAs | Sex | Cases, n | HR (95% CI) | P-value |
|---|---|---|---|---|
| ANXA1 | Male | 246 | 0.72 (0.46–1.12) | 0.1390 |
| Female | 118 | 0.97 (0.56–1.68) | 0.8994 | |
| ANXA2 | Male | 246 | 1.95 (1.23–3.18) | 0.0036 |
| Female | 118 | 1.28 (0.74–2.24) | 0.3754 | |
| ANXA3 | Male | 246 | 0.81 (0.52–1.26) | 0.3489 |
| Female | 118 | 0.80 (0.45–1.41) | 0.4426 | |
| ANXA4 | Male | 246 | 1.02 (0.66–1.59) | 0.9253 |
| Female | 118 | 0.93 (0.53–1.63) | 0.7996 | |
| ANXA5 | Male | 246 | 1.93 (1.22–3.05) | 0.0040 |
| Female | 118 | 1.42 (0.81–2.47) | 0.2176 | |
| ANXA6 | Male | 246 | 0.72 (0.46–1.12) | 0.1458 |
| Female | 118 | 0.88 (0.50–1.53) | 0.6474 | |
| ANXA7 | Male | 246 | 0.53 (0.33–0.83) | 0.0051 |
| Female | 118 | 0.97 (0.55–1.69) | 0.9079 | |
| ANXA8 | Male | 246 | 1.28 (0.82–1.99) | 0.2792 |
| Female | 118 | 1.33 (0.76–2.33) | 0.3218 | |
| ANXA8L1 | Male | 246 | 1.30 (0.83–2.02) | 0.2463 |
| Female | 118 | 0.96(0.55–1.67) | 0.8717 | |
| ANXA9 | Male | 246 | 1.44 (0.92–2.26) | 0.1061 |
| Female | 118 | 1.15 (0.66–2.01) | 0.6123 | |
| ANXA10 | Male | 246 | 0.49 (0.31–0.79) | 0.0023 |
| Female | 118 | 0.61 (0.35–1.07) | 0.0817 | |
| ANXA11 | Male | 246 | 0.84 (0.54–1.31) | 0.4366 |
| Female | 118 | 0.88 (0.51–1.53) | 0.6490 | |
| ANXA13 | Male | 246 | 1.50 (0.96–2.35) | 0.0748 |
| Female | 118 | 0.83 (0.48–1.45) | 0.5123 |
P<0.05 was considered to indicate a statistically significant difference. HR, hazard ratio; CI, confidence interval.
Association between ANXAs and the clinical stage of patients with liver cancer.
| ANXAs | Clinical stage[ | Cases, n | HR (95% CI) | P-value |
|---|---|---|---|---|
| ANXA1 | I | 170 | 0.82 (0.45–1.50) | 0.5175 |
| II | 83 | 0.87 (0.4–1.90) | 0.7345 | |
| III | 83 | 0.74 (0.41–1.33) | 0.3048 | |
| ANXA2 | I | 170 | 1.71 (0.92–3.18) | 0.0884 |
| II | 83 | 0.99 (0.45–2.14) | 0.9710 | |
| III | 83 | 1.46 (0.81–2.64) | 0.2051 | |
| ANXA3 | I | 170 | 0.93 (0.50–1.7) | 0.8034 |
| II | 83 | 0.70 (0.32–1.56) | 0.3842 | |
| III | 83 | 0.6 (0.33–1.11) | 0.1002 | |
| ANXA4 | I | 170 | 0.84 (0.46–1.54) | 0.5760 |
| II | 83 | 0.74 (0.34–1.6) | 0.4393 | |
| III | 83 | 1.43 (0.78–2.62) | 0.2393 | |
| ANXA5 | I | 170 | 2.21 (1.17–4.18) | 0.0122 |
| II | 83 | 0.81 (0.37–1.76) | 0.5909 | |
| III | 83 | 2.06 (1.1–3.84) | 0.0209 | |
| ANXA6 | I | 170 | 1.04 (0.57–1.91) | 0.8932 |
| II | 83 | 0.94 (0.43–2.06) | 0.8786 | |
| III | 83 | 0.58 (0.31–1.07) | 0.0761 | |
| ANXA7 | I | 170 | 0.60 (0.32–1.11) | 0.0988 |
| II | 83 | 0.70 (0.31–1.56) | 0.3820 | |
| III | 83 | 0.41 (0.22–0.78) | 0.0048 | |
| ANXA8 | I | 170 | 0.76 (0.41–1.41) | 0.3879 |
| II | 83 | 1.87 (0.84–4.17) | 0.1216 | |
| III | 83 | 1.10 (0.61–2.01) | 0.7468 | |
| ANXA8L1 | I | 170 | 0.98 (0.54–1.80) | 0.9551 |
| II | 83 | 1.65 (0.74–3.68) | 0.2183 | |
| III | 83 | 0.65 (0.35–1.19) | 0.1583 | |
| ANXA9 | I | 170 | 1.29 (0.70–2.39) | 0.4065 |
| II | 83 | 1.78 (0.80–3.96) | 0.1532 | |
| III | 83 | 1.47 (0.81–2.68) | 0.2039 | |
| ANXA10 | I | 170 | 0.60 (0.32–1.12) | 0.1019 |
| II | 83 | 0.76 (0.35–1.65) | 0.4800 | |
| III | 83 | 0.37 (0.20–0.70) | 0.0017 | |
| ANXA11 | I | 170 | 0.97 (0.53–1.77) | 0.9131 |
| II | 83 | 0.48 (0.21–1.08) | 0.0689 | |
| III | 83 | 1.01 (0.56–1.81) | 0.9758 | |
| ANXA13 | I | 170 | 1.17 (0.63–2.14) | 0.6189 |
| II | 83 | 1.30 (0.59–2.84) | 0.5122 | |
| III | 83 | 1.59 (0.87–2.89) | 0.1273 |
The data of stage IV was not shown as the sample number was too low for meaningful analysis. HR, hazard ratio; CI, confidence interval.
Figure 5.Analysis of the expression and mutation of ANXAs in liver cancer (cBioPortal). (A) The proportion and distribution of cases with ANXAs alterations. (B) The interaction network of ANXAs and their neighboring genes constructed by cBioPortal. The nodes with bold black outlines represent the seed genes while nodes with thin outlines represent neighbor genes. The color of the nodes represents the alteration frequency of the indicated gene. A darker red represent a higher alteration frequency. The brown line indicates that two genes belong to the same component while the blue line indicates that the two genes interact with each other.
Figure 6.Top 10 enrichment function and pathway terms of ANXAs and their neighboring genes in liver cancer. (A-C) Gene Ontology analysis. (D) Kyoto Encyclopedia of Genes and Genomes pathway analysis.