Literature DB >> 31805474

Charge-based interactions of antimicrobial peptides and general drugs with lipid bilayers.

Md Ashrafuzzaman1, C-Y Tseng2, J A Tuszynski3.   

Abstract

Membrane-active agents (MAAs), such as antimicrobial peptides (AMPs) and chemotherapy drugs (CDs), induce ion pores/channels inside lipid bilayer membrane, as confirmed by standard electrophysiology experiments. A novel experimental method is described which detects agents directly at the membrane as confirmed for MAAs, CDs and aptamers. MAAs exhibit characteristic 'charge based' interactions with lipids. Electrostatic (ES) and van der Waals (vdW) contributions to the interaction energies have been estimated using molecular dynamics (MD) simulations. These results are consistent with the screened Coulomb interaction predictions recently developed for lipid bilayer binding of integral AMP channels. Energy- and distance-dependence of MAA-lipid interactions from MD simulations are represented by universal probability functions. A generalized model of MAA-lipid interactions is developed based on the charge and geometrical profiles of the participating lipids and AMPs. The corresponding driving force correlates directly with the stability of MAA-lipid structures as observed in electrophysiology experiments. We conclude that MAAs and similar agents that target lipid membranes exhibit physiological effects mainly due to ES and vdW interactions determined by their charge profiles.
Copyright © 2019 Elsevier Inc. All rights reserved.

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Year:  2019        PMID: 31805474     DOI: 10.1016/j.jmgm.2019.107502

Source DB:  PubMed          Journal:  J Mol Graph Model        ISSN: 1093-3263            Impact factor:   2.518


  6 in total

Review 1.  Endothelial Cell Plasma Membrane Biomechanics Mediates Effects of Pro-Inflammatory Factors on Endothelial Mechanosensors: Vicious Circle Formation in Atherogenic Inflammation.

Authors:  Nadezhda Barvitenko; Mohammad Ashrafuzzaman; Alfons Lawen; Elisaveta Skverchinskaya; Carlota Saldanha; Alessia Manca; Giuseppe Uras; Muhammad Aslam; Antonella Pantaleo
Journal:  Membranes (Basel)       Date:  2022-02-10

Review 2.  Antibacterial and Antiviral Functional Materials: Chemistry and Biological Activity toward Tackling COVID-19-like Pandemics.

Authors:  Bhuvaneshwari Balasubramaniam; Sudhir Ranjan; Mohit Saraf; Prasenjit Kar; Surya Pratap Singh; Vijay Kumar Thakur; Anand Singh; Raju Kumar Gupta
Journal:  ACS Pharmacol Transl Sci       Date:  2020-12-29

3.  Dataset on interactions of membrane active agents with lipid bilayers.

Authors:  Md Ashrafuzzaman; C-Y Tseng; J A Tuszynski
Journal:  Data Brief       Date:  2020-01-16

4.  The Antimicrobial Peptide Gramicidin S Enhances Membrane Adsorption and Ion Pore Formation Potency of Chemotherapy Drugs in Lipid Bilayers.

Authors:  Md Ashrafuzzaman
Journal:  Membranes (Basel)       Date:  2021-03-30

5.  Cell Surface Binding and Lipid Interactions behind Chemotherapy-Drug-Induced Ion Pore Formation in Membranes.

Authors:  Md Ashrafuzzaman; Zahid Khan; Ashwaq Alqarni; Mohammad Alanazi; Mohammad Shahabul Alam
Journal:  Membranes (Basel)       Date:  2021-06-30

6.  Lipid Specific Membrane Interaction of Aptamers and Cytotoxicity.

Authors:  Md Ashrafuzzaman; Hanouf A M AlMansour; Maha A S AlOtaibi; Zahid Khan; Gouse M Shaik
Journal:  Membranes (Basel)       Date:  2021-12-27
  6 in total

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