Literature DB >> 31804615

The m6A epitranscriptome: transcriptome plasticity in brain development and function.

Ido Livneh1, Sharon Moshitch-Moshkovitz2,3,4, Ninette Amariglio3,4,5, Gideon Rechavi2,3,4, Dan Dominissini6,7,8.   

Abstract

The field of epitranscriptomics examines the recently deciphered form of gene expression regulation that is mediated by type- and site-specific RNA modifications. Similarly to the role played by epigenetic mechanisms - which operate via DNA and histone modifications - epitranscriptomic modifications are involved in the control of the delicate gene expression patterns that are needed for the development and activity of the nervous system and are essential for basic and higher brain functions. Here we describe the mechanisms that are involved in the writing, erasing and reading of N6-methyladenosine, the most prevalent internal mRNA modification, and the emerging roles played by N6-methyladenosine in the nervous system.

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Year:  2019        PMID: 31804615     DOI: 10.1038/s41583-019-0244-z

Source DB:  PubMed          Journal:  Nat Rev Neurosci        ISSN: 1471-003X            Impact factor:   34.870


  127 in total

1.  Transcriptome-wide mapping reveals reversible and dynamic N(1)-methyladenosine methylome.

Authors:  Xiaoyu Li; Xushen Xiong; Kun Wang; Lixia Wang; Xiaoting Shu; Shiqing Ma; Chengqi Yi
Journal:  Nat Chem Biol       Date:  2016-02-10       Impact factor: 15.040

Review 2.  Epigenetics: a landscape takes shape.

Authors:  Aaron D Goldberg; C David Allis; Emily Bernstein
Journal:  Cell       Date:  2007-02-23       Impact factor: 41.582

3.  Genomics and Proteomics. Roadmap to the epitranscriptome.

Authors:  Dan Dominissini
Journal:  Science       Date:  2014-12-05       Impact factor: 47.728

Review 4.  Dynamic RNA Modifications in Gene Expression Regulation.

Authors:  Ian A Roundtree; Molly E Evans; Tao Pan; Chuan He
Journal:  Cell       Date:  2017-06-15       Impact factor: 41.582

5.  Comprehensive analysis of mRNA methylation reveals enrichment in 3' UTRs and near stop codons.

Authors:  Kate D Meyer; Yogesh Saletore; Paul Zumbo; Olivier Elemento; Christopher E Mason; Samie R Jaffrey
Journal:  Cell       Date:  2012-05-17       Impact factor: 41.582

6.  The dynamic N(1)-methyladenosine methylome in eukaryotic messenger RNA.

Authors:  Dan Dominissini; Sigrid Nachtergaele; Sharon Moshitch-Moshkovitz; Eyal Peer; Nitzan Kol; Moshe Shay Ben-Haim; Qing Dai; Ayelet Di Segni; Mali Salmon-Divon; Wesley C Clark; Guanqun Zheng; Tao Pan; Oz Solomon; Eran Eyal; Vera Hershkovitz; Dali Han; Louis C Doré; Ninette Amariglio; Gideon Rechavi; Chuan He
Journal:  Nature       Date:  2016-02-10       Impact factor: 49.962

Review 7.  Epitranscriptome sequencing technologies: decoding RNA modifications.

Authors:  Xiaoyu Li; Xushen Xiong; Chengqi Yi
Journal:  Nat Methods       Date:  2016-12-29       Impact factor: 28.547

Review 8.  The emerging field of epigenetics in neurodegeneration and neuroprotection.

Authors:  Jee-Yeon Hwang; Kelly A Aromolaran; R Suzanne Zukin
Journal:  Nat Rev Neurosci       Date:  2017-05-18       Impact factor: 34.870

Review 9.  Epigenetic mechanisms in neurogenesis.

Authors:  Bing Yao; Kimberly M Christian; Chuan He; Peng Jin; Guo-Li Ming; Hongjun Song
Journal:  Nat Rev Neurosci       Date:  2016-06-23       Impact factor: 34.870

10.  Topology of the human and mouse m6A RNA methylomes revealed by m6A-seq.

Authors:  Dan Dominissini; Sharon Moshitch-Moshkovitz; Schraga Schwartz; Mali Salmon-Divon; Lior Ungar; Sivan Osenberg; Karen Cesarkas; Jasmine Jacob-Hirsch; Ninette Amariglio; Martin Kupiec; Rotem Sorek; Gideon Rechavi
Journal:  Nature       Date:  2012-04-29       Impact factor: 49.962

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  60 in total

1.  An Informatics Pipeline for Profiling and Annotating RNA Modifications.

Authors:  Qi Liu; Xiaoqiang Lang; Richard I Gregory
Journal:  Methods Mol Biol       Date:  2021

2.  Hakai is required for stabilization of core components of the m6A mRNA methylation machinery.

Authors:  Praveen Bawankar; Tina Lence; Chiara Paolantoni; Irmgard U Haussmann; Migle Kazlauskiene; Dominik Jacob; Jan B Heidelberger; Florian M Richter; Mohanakarthik P Nallasivan; Violeta Morin; Nastasja Kreim; Petra Beli; Mark Helm; Martin Jinek; Matthias Soller; Jean-Yves Roignant
Journal:  Nat Commun       Date:  2021-06-18       Impact factor: 14.919

Review 3.  Epitranscriptomic Modifications Modulate Normal and Pathological Functions in CNS.

Authors:  Anil K Chokkalla; Suresh L Mehta; Raghu Vemuganti
Journal:  Transl Stroke Res       Date:  2021-07-05       Impact factor: 6.829

Review 4.  An epigenetic 'extreme makeover': the methylation of flaviviral RNA (and beyond).

Authors:  Alessia Ruggieri; Mark Helm; Laurent Chatel-Chaix
Journal:  RNA Biol       Date:  2021-01-18       Impact factor: 4.652

5.  Subcellular relocalization and nuclear redistribution of the RNA methyltransferases TRMT1 and TRMT1L upon neuronal activation.

Authors:  Nicky Jonkhout; Sonia Cruciani; Helaine Graziele Santos Vieira; Julia Tran; Huanle Liu; Ganqiang Liu; Russell Pickford; Dominik Kaczorowski; Gloria R Franco; Franz Vauti; Noelia Camacho; Seyedeh Sedigheh Abedini; Hossein Najmabadi; Lluís Ribas de Pouplana; Daniel Christ; Nicole Schonrock; John S Mattick; Eva Maria Novoa
Journal:  RNA Biol       Date:  2021-02-15       Impact factor: 4.652

Review 6.  RNA Epigenetics: Fine-Tuning Chromatin Plasticity and Transcriptional Regulation, and the Implications in Human Diseases.

Authors:  Amber Willbanks; Shaun Wood; Jason X Cheng
Journal:  Genes (Basel)       Date:  2021-04-22       Impact factor: 4.096

Review 7.  The m6A epitranscriptome on neural development and degeneration.

Authors:  Ya-Ping Yen; Jun-An Chen
Journal:  J Biomed Sci       Date:  2021-05-27       Impact factor: 8.410

8.  m6A modification regulates lung fibroblast-to-myofibroblast transition through modulating KCNH6 mRNA translation.

Authors:  Jia-Xiang Zhang; Pei-Jie Huang; Da-Peng Wang; Wen-Yu Yang; Jian Lu; Yong Zhu; Xiao-Xiao Meng; Xin Wu; Qiu-Hai Lin; Hui Lv; Hui Xie; Rui-Lan Wang
Journal:  Mol Ther       Date:  2021-06-08       Impact factor: 11.454

Review 9.  Regulatory Mechanisms of the RNA Modification m6A and Significance in Brain Function in Health and Disease.

Authors:  Justine Mathoux; David C Henshall; Gary P Brennan
Journal:  Front Cell Neurosci       Date:  2021-05-19       Impact factor: 5.505

Review 10.  Emerging Role of m6 A Methylome in Brain Development: Implications for Neurological Disorders and Potential Treatment.

Authors:  Godwin Sokpor; Yuanbin Xie; Huu P Nguyen; Tran Tuoc
Journal:  Front Cell Dev Biol       Date:  2021-05-19
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