Literature DB >> 31792464

Neural circuits for evidence accumulation and decision making in larval zebrafish.

Armin Bahl1, Florian Engert2.   

Abstract

To make appropriate decisions, animals need to accumulate sensory evidence. Simple integrator models can explain many aspects of such behavior, but how the underlying computations are mechanistically implemented in the brain remains poorly understood. Here we approach this problem by adapting the random-dot motion discrimination paradigm, classically used in primate studies, to larval zebrafish. Using their innate optomotor response as a measure of decision making, we find that larval zebrafish accumulate and remember motion evidence over many seconds and that the behavior is in close agreement with a bounded leaky integrator model. Through the use of brain-wide functional imaging, we identify three neuronal clusters in the anterior hindbrain that are well suited to execute the underlying computations. By relating the dynamics within these structures to individual behavioral choices, we propose a biophysically plausible circuit arrangement in which an evidence integrator competes against a dynamic decision threshold to activate a downstream motor command.

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Mesh:

Year:  2019        PMID: 31792464      PMCID: PMC7295007          DOI: 10.1038/s41593-019-0534-9

Source DB:  PubMed          Journal:  Nat Neurosci        ISSN: 1097-6256            Impact factor:   24.884


  52 in total

Review 1.  The Role of the Lateral Intraparietal Area in (the Study of) Decision Making.

Authors:  Alexander C Huk; Leor N Katz; Jacob L Yates
Journal:  Annu Rev Neurosci       Date:  2017-07-25       Impact factor: 12.449

2.  Visual Evidence Accumulation Guides Decision-Making in Unrestrained Mice.

Authors:  Onyekachi Odoemene; Sashank Pisupati; Hien Nguyen; Anne K Churchland
Journal:  J Neurosci       Date:  2018-10-15       Impact factor: 6.167

3.  Neural basis of a perceptual decision in the parietal cortex (area LIP) of the rhesus monkey.

Authors:  M N Shadlen; W T Newsome
Journal:  J Neurophysiol       Date:  2001-10       Impact factor: 2.714

Review 4.  Diffusion Decision Model: Current Issues and History.

Authors:  Roger Ratcliff; Philip L Smith; Scott D Brown; Gail McKoon
Journal:  Trends Cogn Sci       Date:  2016-03-05       Impact factor: 20.229

5.  FoxP influences the speed and accuracy of a perceptual decision in Drosophila.

Authors:  Shamik DasGupta; Clara Howcroft Ferreira; Gero Miesenböck
Journal:  Science       Date:  2014-05-23       Impact factor: 47.728

6.  Distinct relationships of parietal and prefrontal cortices to evidence accumulation.

Authors:  Timothy D Hanks; Charles D Kopec; Bingni W Brunton; Chunyu A Duan; Jeffrey C Erlich; Carlos D Brody
Journal:  Nature       Date:  2015-01-19       Impact factor: 49.962

7.  Dendritic Integration of Sensory Evidence in Perceptual Decision-Making.

Authors:  Lukas N Groschner; Laura Chan Wah Hak; Rafal Bogacz; Shamik DasGupta; Gero Miesenböck
Journal:  Cell       Date:  2018-04-26       Impact factor: 41.582

8.  A synaptic threshold mechanism for computing escape decisions.

Authors:  Dominic A Evans; A Vanessa Stempel; Ruben Vale; Sabine Ruehle; Yaara Lefler; Tiago Branco
Journal:  Nature       Date:  2018-06-20       Impact factor: 49.962

9.  Microstimulation of macaque area LIP affects decision-making in a motion discrimination task.

Authors:  Timothy D Hanks; Jochen Ditterich; Michael N Shadlen
Journal:  Nat Neurosci       Date:  2006-04-09       Impact factor: 24.884

Review 10.  Decision making as a window on cognition.

Authors:  Michael N Shadlen; Roozbeh Kiani
Journal:  Neuron       Date:  2013-10-30       Impact factor: 17.173

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  22 in total

1.  Brain-Wide Mapping of Water Flow Perception in Zebrafish.

Authors:  Gilles Vanwalleghem; Kevin Schuster; Michael A Taylor; Itia A Favre-Bulle; Ethan K Scott
Journal:  J Neurosci       Date:  2020-04-10       Impact factor: 6.167

2.  Characterizing ontogeny of quantity discrimination in zebrafish.

Authors:  Eva Sheardown; Jose Vicente Torres-Perez; Sofia Anagianni; Scott E Fraser; Giorgio Vallortigara; Brian Butterworth; Maria Elena Miletto-Petrazzini; Caroline H Brennan
Journal:  Proc Biol Sci       Date:  2022-02-09       Impact factor: 5.349

3.  From decision to action: Detailed modelling of frog tadpoles reveals neuronal mechanisms of decision-making and reproduces unpredictable swimming movements in response to sensory signals.

Authors:  Andrea Ferrario; Andrey Palyanov; Stella Koutsikou; Wenchang Li; Steve Soffe; Alan Roberts; Roman Borisyuk
Journal:  PLoS Comput Biol       Date:  2021-12-13       Impact factor: 4.475

4.  A Neural Representation of Naturalistic Motion-Guided Behavior in the Zebrafish Brain.

Authors:  Tugce Yildizoglu; Clemens Riegler; James E Fitzgerald; Ruben Portugues
Journal:  Curr Biol       Date:  2020-05-07       Impact factor: 10.834

Review 5.  Theoretical principles for illuminating sensorimotor processing with brain-wide neuronal recordings.

Authors:  Tirthabir Biswas; William E Bishop; James E Fitzgerald
Journal:  Curr Opin Neurobiol       Date:  2020-11-25       Impact factor: 6.627

Review 6.  Zebrafish as a Model for In-Depth Mechanistic Study for Stroke.

Authors:  Weijie Chen; Lv Xie; Fang Yu; Yan Li; Chen Chen; Wanqing Xie; Tingting Huang; Yueman Zhang; Song Zhang; Peiying Li
Journal:  Transl Stroke Res       Date:  2021-05-29       Impact factor: 6.829

7.  Algorithms underlying flexible phototaxis in larval zebrafish.

Authors:  Alex B Chen; Diptodip Deb; Armin Bahl; Florian Engert
Journal:  J Exp Biol       Date:  2021-05-24       Impact factor: 3.308

8.  A Push For Examining Subjective Experience in Value-Based Decision-Making.

Authors:  Drew C Schreiner; Ege A Yalcinbas; Christina M Gremel
Journal:  Curr Opin Behav Sci       Date:  2021-04-15

9.  Ramp-to-threshold dynamics in a hindbrain population controls the timing of spontaneous saccades.

Authors:  Alexandro D Ramirez; Emre R F Aksay
Journal:  Nat Commun       Date:  2021-07-06       Impact factor: 14.919

Review 10.  Neural substrates involved in the cognitive information processing in teleost fish.

Authors:  R Calvo; V Schluessel
Journal:  Anim Cogn       Date:  2021-04-27       Impact factor: 3.084

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