Literature DB >> 31785365

Whole genome sequencing and phylogenetic characterization of a novel bat-associated picornavirus-like virus with an unusual genome organization.

Sarah Temmam1, Vibol Hul2, Thomas Bigot3, Maël Bessaud4, Delphine Chrétien1, Thavry Hoem5, Christopher Gorman2, Veasna Duong2, Philippe Dussart2, Julien Cappelle6, Marc Eloit7.   

Abstract

The order Picornavirales is one of the most important viral orders in terms of virus diversity and genome organizations, ranging from a mono- or bi-cistronic expression strategies to the recently described poly-cistronic Polycipiviridae viruses. We report here the description and characterization of a novel picorna-like virus identified in rectal swabs of frugivorous bats in Cambodia that presents an unusual genome organization. Kandabadicivirus presents a unique genome architecture and distant phylogenetic relationship to the proposed Badiciviridae family. These findings highlight a high mosaicism of genome organizations among the Picornavirales.
Copyright © 2019 Elsevier B.V. All rights reserved.

Keywords:  Bats; Nucleotide composition analysis; Phylogeny; Picornavirales; Rectal swabs

Year:  2019        PMID: 31785365     DOI: 10.1016/j.meegid.2019.104130

Source DB:  PubMed          Journal:  Infect Genet Evol        ISSN: 1567-1348            Impact factor:   3.342


  1 in total

1.  Microseek: A Protein-Based Metagenomic Pipeline for Virus Diagnostic and Discovery.

Authors:  Philippe Pérot; Thomas Bigot; Sarah Temmam; Béatrice Regnault; Marc Eloit
Journal:  Viruses       Date:  2022-09-08       Impact factor: 5.818

  1 in total

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