Literature DB >> 31784530

Alkyladenine DNA glycosylase associates with transcription elongation to coordinate DNA repair with gene expression.

Nicola P Montaldo1,2, Diana L Bordin1, Alessandro Brambilla1, Marcel Rösinger2, Sarah L Fordyce Martin1, Karine Øian Bjørås1, Stefano Bradamante1, Per Arne Aas1, Antonia Furrer2,3, Lene C Olsen1,4,5, Nicolas Kunath1, Marit Otterlei1, Pål Sætrom1,4,5,6, Magnar Bjørås1,7, Leona D Samson8, Barbara van Loon9,10.   

Abstract

Base excision repair (BER) initiated by alkyladenine DNA glycosylase (AAG) is essential for removal of aberrantly methylated DNA bases. Genome instability and accumulation of aberrant bases accompany multiple diseases, including cancer and neurological disorders. While BER is well studied on naked DNA, it remains unclear how BER efficiently operates on chromatin. Here, we show that AAG binds to chromatin and forms complex with RNA polymerase (pol) II. This occurs through direct interaction with Elongator and results in transcriptional co-regulation. Importantly, at co-regulated genes, aberrantly methylated bases accumulate towards the 3'end in regions enriched for BER enzymes AAG and APE1, Elongator and active RNA pol II. Active transcription and functional Elongator are further crucial to ensure efficient BER, by promoting AAG and APE1 chromatin recruitment. Our findings provide insights into genome stability maintenance in actively transcribing chromatin and reveal roles of aberrantly methylated bases in regulation of gene expression.

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Year:  2019        PMID: 31784530      PMCID: PMC6884549          DOI: 10.1038/s41467-019-13394-w

Source DB:  PubMed          Journal:  Nat Commun        ISSN: 2041-1723            Impact factor:   14.919


  11 in total

Review 1.  The complexity and regulation of repair of alkylation damage to nucleic acids.

Authors:  Ning Tsao; Orlando D Schärer; Nima Mosammaparast
Journal:  Crit Rev Biochem Mol Biol       Date:  2021-01-12       Impact factor: 8.250

2.  Heritable pattern of oxidized DNA base repair coincides with pre-targeting of repair complexes to open chromatin.

Authors:  Albino Bacolla; Shiladitya Sengupta; Zu Ye; Chunying Yang; Joy Mitra; Ruth B De-Paula; Muralidhar L Hegde; Zamal Ahmed; Matthew Mort; David N Cooper; Sankar Mitra; John A Tainer
Journal:  Nucleic Acids Res       Date:  2021-01-11       Impact factor: 16.971

3.  A DNA repair-independent role for alkyladenine DNA glycosylase in alkylation-induced unfolded protein response.

Authors:  Larissa Milano; Clara F Charlier; Rafaela Andreguetti; Thomas Cox; Eleanor Healing; Marcos P Thomé; Ruan M Elliott; Leona D Samson; Jean-Yves Masson; Guido Lenz; João Antonio P Henriques; Axel Nohturfft; Lisiane B Meira
Journal:  Proc Natl Acad Sci U S A       Date:  2022-03-01       Impact factor: 11.205

4.  High-resolution mapping demonstrates inhibition of DNA excision repair by transcription factors.

Authors:  Mingrui Duan; Smitha Sivapragasam; Jacob S Antony; Jenna Ulibarri; John M Hinz; Gregory M K Poon; John J Wyrick; Peng Mao
Journal:  Elife       Date:  2022-03-15       Impact factor: 8.713

Review 5.  Dynamic features of human mitochondrial DNA maintenance and transcription.

Authors:  Mansour Akbari; Hilde Loge Nilsen; Nicola Pietro Montaldo
Journal:  Front Cell Dev Biol       Date:  2022-09-07

6.  Novel interaction interfaces mediate the interaction between the NEIL1 DNA glycosylase and mitochondrial transcription factor A.

Authors:  Nidhi Sharma; Marlo K Thompson; Jennifer F Arrington; Dava M Terry; Srinivas Chakravarthy; Peter E Prevelige; Aishwarya Prakash
Journal:  Front Cell Dev Biol       Date:  2022-07-22

7.  Long-Term Exposure to Nanosized TiO2 Triggers Stress Responses and Cell Death Pathways in Pulmonary Epithelial Cells.

Authors:  Mayes Alswady-Hoff; Johanna Samulin Erdem; Santosh Phuyal; Oskar Knittelfelder; Animesh Sharma; Davi de Miranda Fonseca; Øivind Skare; Geir Slupphaug; Shanbeh Zienolddiny
Journal:  Int J Mol Sci       Date:  2021-05-19       Impact factor: 5.923

Review 8.  Mouse Models of Inherited Retinal Degeneration with Photoreceptor Cell Loss.

Authors:  Gayle B Collin; Navdeep Gogna; Bo Chang; Nattaya Damkham; Jai Pinkney; Lillian F Hyde; Lisa Stone; Jürgen K Naggert; Patsy M Nishina; Mark P Krebs
Journal:  Cells       Date:  2020-04-10       Impact factor: 7.666

9.  Comparison of the Base Excision and Direct Reversal Repair Pathways for Correcting 1,N6-Ethenoadenine in Strongly Positioned Nucleosome Core Particles.

Authors:  Paul J Caffrey; Raadhika Kher; Ke Bian; Deyu Li; Sarah Delaney
Journal:  Chem Res Toxicol       Date:  2020-05-01       Impact factor: 3.739

Review 10.  Genotoxic therapy and resistance mechanism in gliomas.

Authors:  Fengchao Lang; Yang Liu; Fu-Ju Chou; Chunzhang Yang
Journal:  Pharmacol Ther       Date:  2021-06-23       Impact factor: 12.310

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