| Literature DB >> 31784208 |
Ana L Diéguez1, Sabela Balboa1, Jesús L Romalde2.
Abstract
Two Gram-negative strains obtained from tank water in a scallop hatchery in Norway, were phenotypically and genotypically characterized in order to clarify their taxonomic position. On the basis of 16S rRNA gene sequence analysis, these isolates, ATF 5.2T and ATF 5.4T, were included in the genus Halomonas, being their closest relatives H. smyrnensis and H. taeanensis, with similarities of 98.9% and 97.7%, respectively. Sequence analysis of the housekeeping genes atpA, ftsZ, gyrA, gyrB, mreB, rpoB, rpoD, rpoE, rpoH, rpoN and rpoS clearly differentiated the isolates from the currently described Halomonas species, and the phylogenetic analysis using concatenated sequences of these genes located them in two robust and independent branches. DNA-DNA hybridization (eDDH) percentage, together with average nucleotide identity (ANI), were calculated using the complete genome sequences of the strains, and demonstrate that the isolates constitute two new species of Halomonas, for which the names of Halomonas borealis sp. nov. and Halomonas niordiana sp. nov. are proposed, with type strains ATF 5.2T (=CECT 9780T=LMG 31367T) and ATF 5.4T (=CECT 9779T=LMG 31227T), respectively.Entities:
Keywords: ANI; Halomonas borealis sp. nov.; Halomonas niordiana sp. nov.; Halophiles; Whole genome sequencing
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Year: 2019 PMID: 31784208 DOI: 10.1016/j.syapm.2019.126040
Source DB: PubMed Journal: Syst Appl Microbiol ISSN: 0723-2020 Impact factor: 4.022