Literature DB >> 31776069

A two-way switch for inositol pyrophosphate signaling: Evolutionary history and biological significance of a unique, bifunctional kinase/phosphatase.

Thomas A Randall1, Chunfang Gu2, Xingyao Li2, Huanchen Wang2, Stephen B Shears3.   

Abstract

The inositol pyrophosphates (PP-InsPs) are a unique subgroup of intracellular signals with diverse functions, many of which can be viewed as reflecting an overarching role in metabolic homeostasis. Thus, considerable attention is paid to the enzymes that synthesize and metabolize the PP-InsPs. One of these enzyme families - the diphosphoinositol pentakisphosphate kinases (PPIP5Ks) - provides an extremely rare example of separate kinase and phosphatase activities being present within the same protein. Herein, we review the current state of structure/function insight into the PPIP5Ks, the separate specialized activities of the two metazoan PPIP5K genes, and we describe a phylogenetic analysis that places PPIP5K evolutionary origin within the Excavata, the very earliest of eukaryotes. These different aspects of PPIP5K biology are placed in the context of a single, overriding question. Why are they bifunctional: i.e., what is the particular significance of the ability to turn PP-InsP signaling on or off from two separate 'switches' in a single protein? Published by Elsevier Ltd.

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Year:  2019        PMID: 31776069      PMCID: PMC9383039          DOI: 10.1016/j.jbior.2019.100674

Source DB:  PubMed          Journal:  Adv Biol Regul        ISSN: 2212-4926


  91 in total

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Journal:  Nature       Date:  1989-09-21       Impact factor: 49.962

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Journal:  Nat Chem Biol       Date:  2011-11-27       Impact factor: 15.040

3.  The detection, purification, structural characterization, and metabolism of diphosphoinositol pentakisphosphate(s) and bisdiphosphoinositol tetrakisphosphate(s).

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Journal:  J Biol Chem       Date:  1993-02-25       Impact factor: 5.157

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Authors:  Sally J York; Blaine N Armbruster; Patricia Greenwell; Thomas D Petes; John D York
Journal:  J Biol Chem       Date:  2004-11-23       Impact factor: 5.157

5.  Structural and biochemical characterization of Siw14: A protein-tyrosine phosphatase fold that metabolizes inositol pyrophosphates.

Authors:  Huanchen Wang; Chunfang Gu; Ronda J Rolfes; Henning J Jessen; Stephen B Shears
Journal:  J Biol Chem       Date:  2018-03-14       Impact factor: 5.157

6.  Turnover of inositol polyphosphate pyrophosphates in pancreatoma cells.

Authors:  F S Menniti; R N Miller; J W Putney; S B Shears
Journal:  J Biol Chem       Date:  1993-02-25       Impact factor: 5.157

7.  Characterization of metal ion-induced [3H]inositol hexakisphosphate binding to rat cerebellar membranes.

Authors:  D R Poyner; F Cooke; M R Hanley; D J Reynolds; P T Hawkins
Journal:  J Biol Chem       Date:  1993-01-15       Impact factor: 5.157

Review 8.  A high energy phosphate jump - From pyrophospho-inositol to pyrophospho-serine.

Authors:  Shubhra Ganguli; Akruti Shah; Aisha Hamid; Arpita Singh; Ravichand Palakurti; Rashna Bhandari
Journal:  Adv Biol Regul       Date:  2019-10-08

9.  Analysis of Dictyostelium discoideum inositol pyrophosphate metabolism by gel electrophoresis.

Authors:  Francesca Pisani; Thomas Livermore; Giuseppina Rose; Jonathan Robert Chubb; Marco Gaspari; Adolfo Saiardi
Journal:  PLoS One       Date:  2014-01-09       Impact factor: 3.240

10.  A new look at an old question: when did the second whole genome duplication occur in vertebrate evolution?

Authors:  Linda Z Holland; Daniel Ocampo Daza
Journal:  Genome Biol       Date:  2018-11-28       Impact factor: 13.583

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  8 in total

1.  InsP7 is a small-molecule regulator of NUDT3-mediated mRNA decapping and processing-body dynamics.

Authors:  Soumyadip Sahu; Zhenzhen Wang; Xinfu Jiao; Chunfang Gu; Nikolaus Jork; Christopher Wittwer; Xingyao Li; Sarah Hostachy; Dorothea Fiedler; Huanchen Wang; Henning J Jessen; Megerditch Kiledjian; Stephen B Shears
Journal:  Proc Natl Acad Sci U S A       Date:  2020-07-29       Impact factor: 11.205

2.  PPIP5K2 promotes colorectal carcinoma pathogenesis through facilitating DNA homologous recombination repair.

Authors:  Chen-Hui Cao; Han Ling; Kai Han; Xiao-Peng Lu; Mu-Yan Cai; Jing-Hua Cao; Jie Zhou; Zhi-Cheng Xiang; Jie-Wei Chen; Si Li; Jin-Long Lin; Jin-Ling Duan; Jie Luo; Yu-Jing Fang; Zhi-Zhong Pan; Li Liang; Feng Wang; Dan Xie; Feng-Wei Wang
Journal:  Oncogene       Date:  2021-10-13       Impact factor: 9.867

3.  Activities and Structure-Function Analysis of Fission Yeast Inositol Pyrophosphate (IPP) Kinase-Pyrophosphatase Asp1 and Its Impact on Regulation of pho1 Gene Expression.

Authors:  Bradley Benjamin; Angad Garg; Nikolaus Jork; Henning J Jessen; Beate Schwer; Stewart Shuman
Journal:  mBio       Date:  2022-05-10       Impact factor: 7.786

Review 4.  Inositol Pyrophosphate Pathways and Mechanisms: What Can We Learn from Plants?

Authors:  Caitlin Cridland; Glenda Gillaspy
Journal:  Molecules       Date:  2020-06-17       Impact factor: 4.411

5.  Inositol phosphate kinases in the eukaryote landscape.

Authors:  Debabrata Laha; Paloma Portela-Torres; Yann Desfougères; Adolfo Saiardi
Journal:  Adv Biol Regul       Date:  2020-12-29

6.  The inositol pyrophosphate metabolism of Dictyostelium discoideum does not regulate inorganic polyphosphate (polyP) synthesis.

Authors:  Yann Desfougères; Paloma Portela-Torres; Danye Qiu; Thomas M Livermore; Robert K Harmel; Filipy Borghi; Henning J Jessen; Dorothea Fiedler; Adolfo Saiardi
Journal:  Adv Biol Regul       Date:  2021-11-10

7.  New structural insights reveal an expanded reaction cycle for inositol pyrophosphate hydrolysis by human DIPP1.

Authors:  Guangning Zong; Nikolaus Jork; Sarah Hostachy; Dorothea Fiedler; Henning J Jessen; Stephen B Shears; Huanchen Wang
Journal:  FASEB J       Date:  2021-02       Impact factor: 5.834

Review 8.  Metabolism and Functions of Inositol Pyrophosphates: Insights Gained from the Application of Synthetic Analogues.

Authors:  Stephen B Shears; Huanchen Wang
Journal:  Molecules       Date:  2020-10-02       Impact factor: 4.411

  8 in total

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