| Literature DB >> 31772255 |
Rosie J Chance1, Liselotte Tinel2, Tomás Sherwen2,3, Alex R Baker4, Thomas Bell5, John Brindle4, Maria Lucia A M Campos6, Peter Croot7, Hugh Ducklow8, He Peng9,10, Frances Hopkins5, Babette Hoogakker11, Claire Hughes4,12, Timothy D Jickells4, David Loades2, Dharma Andrea Reyes Macaya13, Anoop S Mahajan14, Gill Malin4, Daniel Phillips5, Ieuan Roberts2, Rajdeep Roy15, Amit Sarkar16,17, Alok Kumar Sinha16, Xiuxian Song18, Helge Winkelbauer11, Kathrin Wuttig19,20, Mingxi Yang5, Zhou Peng18, Lucy J Carpenter2.
Abstract
The marine iodine cycle has significant impacts on air quality and atmospheric chemistry. Specifically, the reaction of iodide with ozone in the top few micrometres of the surface ocean is an important sink for tropospheric ozone (a pollutant gas) and the dominant source of reactive iodine to the atmosphere. Sea surface iodide parameterisations are now being implemented in air quality models, but these are currently a major source of uncertainty. Relatively little observational data is available to estimate the global surface iodide concentrations, and this data has not hitherto been openly available in a collated, digital form. Here we present all available sea surface (<20 m depth) iodide observations. The dataset includes values digitised from published manuscripts, published and unpublished data supplied directly by the originators, and data obtained from repositories. It contains 1342 data points, and spans latitudes from 70°S to 68°N, representing all major basins. The data may be used to model sea surface iodide concentrations or as a reference for future observations.Entities:
Year: 2019 PMID: 31772255 PMCID: PMC6879483 DOI: 10.1038/s41597-019-0288-y
Source DB: PubMed Journal: Sci Data ISSN: 2052-4463 Impact factor: 6.444
Fig. 1Locations of iodide observations included in our dataset. New data reported here is in red and existing data from Chance et al.[12] is blue. Figure produced with Python Matplotlib[79].
Summary of datasets included in this compilation.
| # | Data_key | Geographical Location | n obs | Analytical method | Year(s) | Source | Reference |
|---|---|---|---|---|---|---|---|
| 1 | Chance_2007 | Southern Ocean (Atlantic sector) | 49 | 3 | 2004 | Provided by originator |
[ |
| 2 | Chance_UnP_I | tropical east Atlantic | 28 | 3 | 2007 | Provided by originator | Unpublished |
| 3 | Elderfield_T_1980 | Antarctic, Pacific, Atlantic | 13 | 1 | 1976–1978 | Publication |
[ |
| 4 | Truesdale_2003_I | Skagerrak | 15 | 3 | 2001 | Publication |
[ |
| 5 | Truesdale_2000 | Atlantic | 42 | 1 | 1996–1997 | Publication |
[ |
| 6 | Truesdale_2001 | Baltic | 7 | 1 | 1999 | Publication |
[ |
| 7 | Truesdale_2003_II | western Antarctic Peninsula | 1 | 1 | 2001 | Publication |
[ |
| 8 | Waite_2006 | north Atlantic, Greenland & Norwegian Seas | 13 | 3 | 2000 | Publication |
[ |
| 9 | Wong_B_1977 | Venezuela Basin, Cariaco Trench, Black Sea | 3 | 6 | ~1975 | Publication |
[ |
| 10 | Campos_1996 | Atlantic & Pacific | 14 | 3 | 1993–1994 | Publication |
[ |
| 11 | Truesdale_B_2002 | Benguela upwelling | 1 | 1 | 1997 | Publication |
[ |
| 12 | Tian_1995_1996 | north west Mediterranean | 20 | 3 | 1993–1994 | Repository (PANGAEA) |
[ |
| 13 | Truesdale_1978 | Indian, Atlantic, Irish Sea | 6 | 1 | 1967, 1970, 1972, 1986 | Publication |
[ |
| 14 | Jickells_1988 | Sargasso Sea & Bermuda inshore | 110 | 1 | 1984–1985 | Provided by originator |
[ |
| 15 | Wong_B_1974 | Argentine Basin, Angola Basin | 3 | 1 | 1972 | Publication |
[ |
| 16 | McTaggart_1994 | east Australian coast | 13 | 10 | 1991 | Publication |
[ |
| 17 | Truesdale_U_2003 | British east coast | 3 | 1 | 1999 | Publication |
[ |
| 18 | Wong_Z_2003 | southern East China Sea | 14 | 3 | 1992 | Publication |
[ |
| 19 | Wong_Z_1992 | southern Atlantic Bight | 41 | 2 | 1987 | Publication |
[ |
| 20 | Campos_1999 | south Atlantic, Weddell Sea | 17 | 3 | 1995 | Repository (BODC) |
[ |
| 21 | Nakayama_1989_1985 | north Pacific | 13 | 5 | 1984, 1985 | Publication |
[ |
| 22 | Farrenkopf_2002 | Arabian Sea | 3 | 3 | 1995 | Repository (JGOFS) |
[ |
| 23 | Wong_1985 | Orca Basin, Gulf of Mexico | 1 | 2 | 1982 | Publication |
[ |
| 24 | Ullman_1990 | Mediterranean | 7 | 3 | 1987 | Publication |
[ |
| 25 | Woittiez_1991 | Kau Bay, Indonesian coast | 2 | 13 | 1985 | Publication |
[ |
| 26 | Schwehr_S_2003 | Gulf of Mexico, Galveston Bay | 7 | 9 | 1999–2000 | Publication |
[ |
| 27 | Tsunogai_1971 | north Pacific | 11 | 12 | 1970 | Publication |
[ |
| 28 | Wong_C_1998 | Chesapeake Bay | 13 | 3 | ~1998? | Publication |
[ |
| 29 | Huang_2005 | north Pacific | 3 | 11 | 2003 | Publication |
[ |
| 30 | Bluhm_2011 | Southern Ocean (Atlantic sector) | 23 | 3 | 2008 | Publication |
[ |
| 31 | Wong_C_2008 | Chesapeake Bay | 9 | 3 | 1987, 1992, 1995 | Publication |
[ |
| 32 | Hou_2007 | North Sea | 43 | 7 | 2005 | Publication |
[ |
| 33 | Tsunogai_H_1971 | Pacific | 59 | 12 | 1968–1969 | Publication |
[ |
| 34 | Liss_H_G_1973 | southern Californian coast | 6 | 2 | 1972 | Publication |
[ |
| 35 | Luther_1988 | north west Atlantic, Chesapeake bay | 5 | 3 | 1987 | Publication |
[ |
| 36 | Baker_UnP | Eastern, north & south Atlantic | 16 | 3 | 2000 | Provided by originator | Unpublished |
| 37 | Truesdale_J_2000 | British coastal waters | 185 | 1 | 1996 | Repository (BODC) |
[ |
| 38 | Luther_UnP | south west Atlantic | 1 | 3 | 1992–1993 | Repository (BODC) | Unpublished |
| 39 | Ducklow_2018 | western Antarctic Peninsula | 19 | 3 | 2012 | Provided by originator |
[ |
| 40 | Chance_UnP_II | tropical Atlantic | 18 | 3 | 2011 | Provided by originator | Unpublished |
| 41 | Hou_2013 | Fukushima offshore | 1 | 8 | 2011 | Publication |
[ |
| 42 | Rue_1997 | tropical North Pacific | 1 | 4 | 1982 | Publication |
[ |
| 43 | Chance_2010 | western Antarctic Peninsula | 61 | 3 | 2005–2008 | Provided by originator |
[ |
| 44 | Luther_C_1991 | Black Sea | 2 | 3 | 1988 | Publication |
[ |
| 45 | Wong_1977 | Equatorial Atlantic | 4 | 6 | 1974 | Publication (thesis) |
[ |
| 46 | He_2013 | north east Atlantic | 34 | 7 | 2010 | Provided by originator |
[ |
| 47 | He_2014 | North Sea | 12 | 7 | 2010 | Provided by originator |
[ |
| 48 | Chance_2018_I | Indian Ocean | 111 | 3 | 2017 | Provided by originator | Unpublished |
| 49 | Chance_2018_II | Indian Ocean | 7 | 3 | 2016 | Provided by originator | Unpublished |
| 50 | Chance_2018_III | Indian Ocean | 12 | 3 | 2016 | Provided by originator | Unpublished |
| 51 | Chance_UnP_III | English Channel | 23 | 3 | 2016–2018 | Provided by originator | Unpublished |
| 52 | Croot_UnP | eastern Pacific | 6 | 3 | 2008 | Provided by originator | Unpublished |
| 53 | Cutter_2018 | Peruvian upwelling | 20 | 3 | 2013 | Repository (BODC) |
[ |
| 54 | Zhou_2017 | East China Sea | 122 | 3 | 2014 | Provided by originator |
[ |
| 55 | Campos_UnP | north west Atlantic | 15 | 3 | 1992–1993 | Provided by originator | Unpublished |
| 56 | Chance_UnP_IV | eastern Pacific | 3 | 3 | 2018 | Provided by originator | Unpublished |
| 57 | Chance_UnP_V | Benguela upwelling | 6 | 3 | 2018 | Provided by originator | Unpublished |
Data record fields or Column names, column description and units for each field included in the sea surface iodide database.
| Field header | Description & unit or key |
|---|---|
Data_Key Data_Key_id | Unique identifier for dataset. Unique identifier for the data point: Dataset (see above) followed by the index of the datapoint in the input dataset |
Latitude Longitude Year Month Day | Latitude coordinate of data point, decimal degrees north Longitude coordinate of data point, decimal degrees east Sometimes available Sometimes available Rarely available |
Iodide Iodide error Error Flag | Iodide concentration, nmol L−1 Estimated uncertainty on iodide concentration, nmol L−1 Indicates way uncertainty was estimated: 1 Precision stated in paper or by source, based on replicate analyses of selected samples 2 Precision assumed same as in similar work using same method 3 Individual samples all analysed in replicate, uncertainty is range (n = 2) or sd (n > = 3) 4 Propagated analytical uncertainty for replicates of a given sample, where this is greater than uncertainty determined by (3) 5 Analytical uncertainty derived from scatter in repeat scans within a single analysis 6 Propagation of stated uncertainties on Iodate and TII, where [I−] calculated by difference 7 Value < LoD; replaced with substitute value 8 None given & no comparable methods 9 Standard deviation of similar samples that have been grouped to give an average iodide concentration for the position |
| Method | See Table |
Coastal LocatorFlag | 0 = open ocean location 1 = coastal location Indicates way coastal flag was assigned as follows: 0 Location found by province picker, coastal determined according to Province 1 Location not found by Province picker as too close to coast, so Province manually assigned. Province necessarily coastal. 2 Province is open ocean, but individual samples known to be coastal e.g. Bermuda Inshore |
| Reference | Publication in which the data set is described. |
Analytical methods and associated uncertainties.
| Type | Key | Analytical Method(s) | Method Reference(s) | Typical Uncertainty | n data sets | n data points |
|---|---|---|---|---|---|---|
Difference [I−] = [TII] − [IO3−] | 1 | a. IO3− by spectrophotometric detection of I3− b. TII by catalytic effect on CeIV and AsIII reaction, with spectrophotometric determination of CeIV c. TII by oxidation + method (a) d. Estimate TII from deep-water IO3− average, only[ | [ [ [ | a. IO3− error ~1%[ b. TII error ~0.06%[ c. TII error ~ 20 nM[ | 11 | 382 |
| 2 | a. IO3− by DPP b. TII by oxidation + method (a) | [ | a. IO3− error ~2.5–5%[ b. TII error ~2.5–5%[ | 3 | 48 | |
| Electrochemical | 3 | [ | 2–10%;[ | 30 | 706 | |
| 4 | (sulphite removal of oxygen) | [ | 1%[ | 1 | 1 | |
| 5 | [ | ~5% or 10 nM in artificial seawater[ | 1 | 13 | ||
| Chromatographic | 6 | [ | 5%[ | 2 | 7 | |
| 7 | [ | 3–7%[ | 4 | 90 | ||
| 8 | [ | ~5%[ | 1 | 7 | ||
| 9 | [ | 2%[ | 1 | 13 | ||
| Electrokinetic | 10 | [ | ~3%[ | 1 | 3 | |
| Precipitation | 11 | [ | 3–5%[ | 2 | 70 | |
| 13 | [ | ~5% (13 nM)[ | 1 | 2 |
Fig. 2Estimated probability density function (PDF; kernel density estimate) for sea surface iodide observations. Plot shows all data (blue) combined, and open ocean (green) and coastal (red) data treated separately. Expanded inset shows values <400 nM only. Figure produced with Python Matplotlib[79] and Seaborn[80] packages.
| Measurement(s) | iodide |
| Technology Type(s) | digital curation |
| Factor Type(s) | sampling time and place |
| Sample Characteristic - Environment | sea water • ocean |
| Sample Characteristic - Location | Earth (planet) |