Literature DB >> 31768650

Multiplexed aptasensing of food contaminants by using terminal deoxynucleotidyl transferase-produced primer-triggered rolling circle amplification: application to the colorimetric determination of enrofloxacin, lead (II), Escherichia coli O157:H7 and tropomyosin.

Yumei Du1, Yangyang Zhou1, Yanli Wen2, Xiaojun Bian1, Yuanyuan Xie1, Weijia Zhang3, Gang Liu4, Juan Yan5.   

Abstract

A colorimetric assay is described for simultaneous detection of multiple analytes related to food safety. It is based on the use of a sandwich aptasensor and terminal deoxynucleotidyl transferase (TdT) which produces a primer for subsequent rolling circle amplification (RCA). Two split aptamer fragments (Apt1 and Apt2) are firstly immobilized, Apt1 on gold nanoparticles (AuNPs), and Apt2 on magnetic beads (MBs). They are then used in a sandwich aptasensor. In the presence of analyte, two probes could specifically recognize target and form a ternary assembly, and the magnetic beads also act to separate rapidly and enrich the target. Then, the extension of template-free DNA is triggered by TdT at the exposed 3'-hydroxy terminals of Apt1. This produces polyA sequences that serve as primers for subsequent RCA. The product of RCA is hybridized with a complementary horse radish peroxidase (HRP) DNA probe. HRP catalyzes the H2O2-mediated oxidation of tetramethylbenzidine (TMB) and forms a blue chromogenic product. After magnetic separation, the absorption values of the blue product in the supernatant are measured at a wavelength of 600 nm. Based on this dual amplification mechanism, the assay was applied to multiplexed determination of enrofloxacin (ENR), lead(II), Escherichia coli O157:H7 and tropomyosin. Exemplarily, ENR is detectable at concentrations down to 2.5 pg mL-1 with a linear range that extends from 1 pg mL-1 to 1 μg·mL-1. The assay was validated by analysis of spiked fish samples. Recoveries range between 87.5 and 92.1%. Graphical abstractSchematic representation of a TdT-RCA based aptasensor for multiple analytes related to food safety. It makes use of sandwich aptasensors and TdT-produced universal primer-triggered RCA reaction. dATP: deoxyadenosine triphosphate, TdT: Terminal Deoxynucleotidyl Transferase, RCA: rolling circle amplification, TMB: 3,3',5,5'-Tetramethylbenzidine.

Entities:  

Keywords:  Antibiotics; Aptasensor; Biodetection; Food safety detection; Gold nanoparticles; Isothermal nucleic acid amplification; Magnetic beads; Signal amplification method

Mesh:

Substances:

Year:  2019        PMID: 31768650     DOI: 10.1007/s00604-019-3935-2

Source DB:  PubMed          Journal:  Mikrochim Acta        ISSN: 0026-3672            Impact factor:   5.833


  30 in total

1.  An on-nanoparticle rolling-circle amplification platform for ultrasensitive protein detection in biological fluids.

Authors:  Juan Yan; Shiping Song; Bing Li; Qingzhi Zhang; Qing Huang; Hua Zhang; Chunhai Fan
Journal:  Small       Date:  2010-11-22       Impact factor: 13.281

Review 2.  Biosensor technology: recent advances in threat agent detection and medicine.

Authors:  Jeffrey Kirsch; Christian Siltanen; Qing Zhou; Alexander Revzin; Aleksandr Simonian
Journal:  Chem Soc Rev       Date:  2013-11-21       Impact factor: 54.564

3.  Determination of residual enrofloxacin in food samples by a sensitive method of chemiluminescence enzyme immunoassay.

Authors:  Fei Yu; Songcheng Yu; Lanlan Yu; Yanqiang Li; Yongjun Wu; Hongquan Zhang; Lingbo Qu; Peter de B Harrington
Journal:  Food Chem       Date:  2013-10-26       Impact factor: 7.514

Review 4.  Aptamer-based nanobiosensors.

Authors:  Yeon Seok Kim; Nurul Hanun Ahmad Raston; Man Bock Gu
Journal:  Biosens Bioelectron       Date:  2015-06-20       Impact factor: 10.618

5.  Ultrasensitive impedimetric mercury(II) sensor based on thymine-Hg(II)-thymine interaction and subsequent disintegration of multiple sandwich-structured DNA chains.

Authors:  Feng Gao; Taoshun Zhang; Yaru Chu; Qingxiang Wang; Juan Song; Weiwei Qiu; Zhenyu Lin
Journal:  Mikrochim Acta       Date:  2018-11-21       Impact factor: 5.833

6.  Terminal deoxynucleotidyl transferase (TdT)-catalyzed homo-nucleotides-constituted ssDNA: Inducing tunable-size nanogap for core-shell plasmonic metal nanostructure and acting as Raman reporters for detection of Escherichia coli O157:H7.

Authors:  Yangyang Zhou; Weina Fang; Keqiang Lai; Yongheng Zhu; Xiaojun Bian; Jianlei Shen; Qian Li; Lihua Wang; Weijia Zhang; Juan Yan
Journal:  Biosens Bioelectron       Date:  2019-06-08       Impact factor: 10.618

7.  Double signal enhancement strategy based on rolling circle amplification and photoinduced electron transfer for ultrasensitive fluorometric detection of methylated DNA.

Authors:  Pingdan Yan; Yixiong Hao; Zhaoche Shu; Chunling Gu; Xiaomei Zhou; Xiaoyu Liu; Hua Xiang
Journal:  Mikrochim Acta       Date:  2018-05-13       Impact factor: 5.833

8.  The Discovery of Rolling Circle Amplification and Rolling Circle Transcription.

Authors:  Michael G Mohsen; Eric T Kool
Journal:  Acc Chem Res       Date:  2016-10-24       Impact factor: 22.384

9.  A DNA nanomachine based on rolling circle amplification-bridged two-stage exonuclease III-assisted recycling strategy for label-free multi-amplified biosensing of nucleic acid.

Authors:  Qingwang Xue; Yanqin Lv; Hui Cui; Xiaohong Gu; Shuqiu Zhang; Jifeng Liu
Journal:  Anal Chim Acta       Date:  2014-12-03       Impact factor: 6.558

10.  Whole-bacterium SELEX of DNA aptamers for rapid detection of E.coli O157:H7 using a QCM sensor.

Authors:  Xiaofan Yu; Fang Chen; Ronghui Wang; Yanbin Li
Journal:  J Biotechnol       Date:  2017-12-12       Impact factor: 3.307

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  1 in total

Review 1.  Combating small molecule environmental contaminants: detection and sequestration using functional nucleic acids.

Authors:  Aimee A Sanford; Brea A Manuel; Misael A Romero-Reyes; Jennifer M Heemstra
Journal:  Chem Sci       Date:  2022-06-06       Impact factor: 9.969

  1 in total

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