Literature DB >> 31765523

Genotype and phenotype evaluation of patients with primary ciliary dyskinesia: First results from Turkey.

Nagehan Emiralioğlu1, Ekim Z Taşkıran2, Can Koşukcu3, Elif Bilgiç4, Pergin Atilla4, Bengisu Kaya4, Önder Günaydın5, Ayşe Yüzbaşıoğlu6, Gökçen Dilşa Tuğcu1, Dilber Ademhan1, Sanem Eryılmaz Polat1, Mina Gharibzadeh Hızal1, Ebru Yalçın1, Deniz Doğru1, Nural Kiper1, Mehmet Alikaşifoğlu2, Uğur Özçelik1.   

Abstract

BACKGROUND AND
OBJECTIVE: Primary ciliary dyskinesia (PCD) is a rare and genetically heterogeneous disease and the severity of the disease related with genetic analysis has been described in some previous studies. The main aim of our study was to describe the clinical characteristics and laboratory findings of patients with genetically diagnosed PCD and to investigate the correlation between clinical, radiologic, and laboratory findings and genetic analyses of these patients.
METHOD: This is a cohort study in which we analyzed the clinical characteristics, laboratory findings, and genetic results of 46 patients with genetically diagnosed PCD through whole-exome sequencing at our single center from a total of 265 patients with PCD within a 5-year period.
RESULTS: Genetic analysis revealed pathogenic variants in DNAH5 (n = 12 individuals, 12 families), CCDC40 (n = 9 individuals, six families), RSPH4A (n = 5 individuals, three families), DNAH11 (n = 4 individuals, four families), HYDIN (n = 5 individuals, five families), CCNO (n = 4 individuals, four families), DNAI1 (n = 2 individuals, one family), ARMC4 (n = 2 individuals, two families), TTC25 (n = 1), DNAH1 (n = 1), and CCDC39 (n = 1) genes. Although not statistically significant, the age at diagnosis was lower (median: 3 years; range, 6 months-4 years) in patients with CCNO pathogenic variants due to the early reporting of symptoms, and the median body mass index (BMI) and BMI z scores were lower in patients at 18.7 and 16 kg/m2 , and -0.78 and -1.2 with CCDC40 and CCNO pathogenic variants, respectively. The median forced expiratory flow in 1 second (FEV1%), forced vital capacity (FVC%), and forced expiratory flow (FEF)25-75% were 53%, 64%, and 28%, respectively; these parameters were also lower in the CCDC40 group than in the other groups. There was no significant correlation between the genetic results and symptoms, radiologic findings, and microbiologic data of patients with PCD.
CONCLUSION: In PCD, there was significant heterogeneity of lung disease, patients who had pathogenic variants in CCNO presented earlier, and those with CCDC40 and CCNO had worse lung disease, and poorer nutritional status compared with the other subgroups. We hope that whole genotype-phenotype and clinical relationships will be identified in PCD.
© 2019 Wiley Periodicals, Inc.

Entities:  

Keywords:  genotype; phenotype; primary ciliary dyskinesia; whole-exome sequencing

Mesh:

Substances:

Year:  2019        PMID: 31765523     DOI: 10.1002/ppul.24583

Source DB:  PubMed          Journal:  Pediatr Pulmonol        ISSN: 1099-0496


  17 in total

1.  Identification of Two Novel DNAAF2 Variants in Two Consanguineous Families with Primary Ciliary Dyskinesia.

Authors:  Chenyang Lu; Danhui Yang; Cheng Lei; Rongchun Wang; Ting Guo; Hong Luo
Journal:  Pharmgenomics Pers Med       Date:  2021-11-10

2.  Novel RSPH4A Variants Associated With Primary Ciliary Dyskinesia-Related Infertility in Three Chinese Families.

Authors:  Lin Wang; Rongchun Wang; Danhui Yang; Chenyang Lu; Yingjie Xu; Ying Liu; Ting Guo; Cheng Lei; Hong Luo
Journal:  Front Genet       Date:  2022-06-22       Impact factor: 4.772

3.  Clinical and genetic features of primary ciliary dyskinesia in a cohort of consecutive clinically suspect children in western China.

Authors:  Ying Li; Wenlong Fu; Gang Geng; Jihong Dai; Zhou Fu; Daiyin Tian
Journal:  BMC Pediatr       Date:  2022-07-08       Impact factor: 2.567

4.  Clinical and Genetic Spectrum of Children With Primary Ciliary Dyskinesia in China.

Authors:  Yuhong Guan; Haiming Yang; Xingfeng Yao; Hui Xu; Hui Liu; Xiaolei Tang; Chanjuan Hao; Xiang Zhang; Shunying Zhao; Wentong Ge; Xin Ni
Journal:  Chest       Date:  2021-02-10       Impact factor: 9.410

5.  Novel Compound Heterozygous Variants in CCDC40 Associated with Primary Ciliary Dyskinesia and Multiple Morphological Abnormalities of the Sperm Flagella.

Authors:  Yingjie Xu; Binyi Yang; Cheng Lei; Danhui Yang; Shuizi Ding; Chenyang Lu; Lin Wang; Ting Guo; Rongchun Wang; Hong Luo
Journal:  Pharmgenomics Pers Med       Date:  2022-04-15

6.  The global prevalence and ethnic heterogeneity of primary ciliary dyskinesia gene variants: a genetic database analysis.

Authors:  William B Hannah; Bryce A Seifert; Rebecca Truty; Maimoona A Zariwala; Kristen Ameel; Yi Zhao; Keith Nykamp; Benjamin Gaston
Journal:  Lancet Respir Med       Date:  2022-01-17       Impact factor: 102.642

7.  The Novel Key Genes of Non-obstructive Azoospermia Affect Spermatogenesis: Transcriptomic Analysis Based on RNA-Seq and scRNA-Seq Data.

Authors:  Haihong He; Fan Yu; Wang Shen; Keyan Chen; Lijun Zhang; Shuang Lou; Qiaomin Zhang; Siping Chen; Xinhua Yuan; Xingwang Jia; Yiwen Zhou
Journal:  Front Genet       Date:  2021-02-26       Impact factor: 4.599

Review 8.  Emerging Genotype-Phenotype Relationships in Primary Ciliary Dyskinesia.

Authors:  Steven K Brennan; Thomas W Ferkol; Stephanie D Davis
Journal:  Int J Mol Sci       Date:  2021-07-31       Impact factor: 6.208

Review 9.  Cyclin-dependent kinases and rare developmental disorders.

Authors:  Pierre Colas
Journal:  Orphanet J Rare Dis       Date:  2020-08-06       Impact factor: 4.123

10.  The Relationship between Genotype and Phenotype in Primary Ciliary Dyskinesia Patients.

Authors:  Ayse Ayzit Kilinc; Memnune Nur Cebi; Zeynep Ocak; Haluk Cezmi Cokugras
Journal:  Sisli Etfal Hastan Tip Bul       Date:  2021-07-02
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