Huub M M Ten Eikelder1, Albert J Markvoort1. 1. Computational Biology Group and Institute for Complex Molecular Systems , Eindhoven University of Technology , P.O. Box 513, 5600 MB Eindhoven , The Netherlands.
Abstract
Recent years have witnessed increasing attention on supramolecular polymerization, i.e., the formation of one-dimensional aggregates in which the monomeric units bind together via reversible and usually highly directional non-covalent interactions. Because of the presence of these reversible interactions, such as hydrogen bonding, π-π interactions, or metal coordination, supramolecular polymers exhibit numerous desirable properties ranging from high thermoresponsiveness to self-healing and great capacity for processability and recycling. These properties relate to intriguing experimentally observed nonlinear effects such as the monomer-dependent presence of a critical temperature for aggregation and a solvent- and temperature-tunable aggregate morphology. For coassemblies this is complemented with monomer-ratio- and monomer-compatibility-dependent internal order as well as majority-rules-type chiral amplification. However, the dynamic nature of the (co)polymers and the intricate interplay of many interactions make these effects difficult to rationalize without theoretical models. This Account presents recent advances in the development and use of equilibrium models for supramolecular copolymerization based on mass balances, mainly developed by our group. The basic idea of these models is that we describe a supramolecular (co)polymerization by a set of independent equilibrium reactions, like monomer associations and dissociations, and that in thermodynamic equilibrium the concentrations of the reactants and products in each reaction are coupled via the equilibrium constant of that reaction. Recursion then allows the concentration of each possible aggregate to be written as a function of the free monomer concentrations. Because a monomer should be present either as a free monomer or in one of the aggregates, a set of n equations can be formed with the n free monomer concentrations as the only unknowns. This set of mass-balance equations can then be solved numerically, yielding the free monomer concentrations, from which the complete system can be reconstituted. By a step-by-step extension of the model for the aggregation of a single monomer type to include the formation of multiple aggregate types and the coassembly of multiple monomer types, we can capture increasingly complex supramolecular (co)polymerizations. In each step we illustrate how the extended model explains in detail another of the experimentally observed nonlinear effects, with the common denominator that small differences in association energies are intricately amplified at the supramolecular level. We finally arrive at our latest and most general approach to modeling (cooperative) supramolecular (co)polymerization, which encompasses all of our earlier models and shows great promise to help rationalize also future systems featuring ever-increasing complexity.
Recent years have witnessed increasing attention on supramolecular polymerization, i.e., the formation of one-dimensional aggregates in which the monomeric units bind together via reversible and usually highly directional non-covalent interactions. Because of the presence of these reversible interactions, such as hydrogen bonding, π-π interactions, or metalcoordination, supramolecular polymers exhibit numerous desirable properties ranging from high thermoresponsiveness to self-healing and great capacity for processability and recycling. These properties relate to intriguing experimentally observed nonlinear effects such as the monomer-dependent presence of a critical temperature for aggregation and a solvent- and temperature-tunable aggregate morphology. For coassemblies this is complemented with monomer-ratio- and monomer-compatibility-dependent internal order as well as majority-rules-type chiral amplification. However, the dynamic nature of the (co)polymers and the intricate interplay of many interactions make these effects difficult to rationalize without theoretical models. This Account presents recent advances in the development and use of equilibrium models for supramolecular copolymerization based on mass balances, mainly developed by our group. The basic idea of these models is that we describe a supramolecular (co)polymerization by a set of independent equilibrium reactions, like monomer associations and dissociations, and that in thermodynamic equilibrium the concentrations of the reactants and products in each reaction are coupled via the equilibrium constant of that reaction. Recursion then allows the concentration of each possible aggregate to be written as a function of the free monomer concentrations. Because a monomer should be present either as a free monomer or in one of the aggregates, a set of n equations can be formed with the n free monomer concentrations as the only unknowns. This set of mass-balance equations can then be solved numerically, yielding the free monomer concentrations, from which the complete system can be reconstituted. By a step-by-step extension of the model for the aggregation of a single monomer type to include the formation of multiple aggregate types and the coassembly of multiple monomer types, we can capture increasingly complex supramolecular (co)polymerizations. In each step we illustrate how the extended model explains in detail another of the experimentally observed nonlinear effects, with the common denominator that small differences in association energies are intricately amplified at the supramolecular level. We finally arrive at our latest and most general approach to modeling (cooperative) supramolecular (co)polymerization, which encompasses all of our earlier models and shows great promise to help rationalize also future systems featuring ever-increasing complexity.
Supramolecular polymers are one-dimensional
aggregates in which
the monomeric units bind together via reversible and usually highly
directional non-covalent interactions. A wide variety of naturally
occurring and synthetically made molecules are known to form such
aggregates, typically driven by hydrogen bonding, π–π
interactions, metalcoordination, and/or hydrophobic interactions.
The reversible nature of these non-covalent interactions provides
supramolecular polymers with a wide array of desirable properties
ranging from high thermoresponsiveness to self-healing and a great
capacity for processability and recycling.[1−3] However, a prerequisite
for their wide applicability is a thorough understanding and ensuing
control of their behavior. A common way to investigate supramolecular
(co)polymers has been to follow quantities such as the absorbance,
circular dichroism, or fluorescence in titration and cooling experiments. Figure illustrates a selection
of nonlinear phenomena discovered in this way over the past decade,
which have been attributed to monomer-dependent high thermoresponsiveness
with or without a critical temperature for polymer formation (Figure a),[4] solvent- and temperature-tunable aggregate morphology (Figure b),[5] majority-rules-based copolymerization of enantiomers (Figure c),[6] and monomer-ratio- and monomer-compatibility-dependent
internal order within copolymers (Figure d).[7] Because of
the dynamic nature of supramolecular (co)polymers and the intricate
interplay of many interactions, the use of models has proven indispensable
to understand the molecular basis of these effects.
Figure 1
Examples of nonlinear
behavior in supramolecular (co)polymerizations.
(a) Cooling curves for C3-symmetric benzotrithiophenes
BTT-F and BTT-5F with and without a sharp elongation temperature,
respectively, at various concentrations in water (data obtained from
ref (4)). (b) Cooling
curves for deuterated benzenetricarboxamides (BTAs) in heptane indicating
temperature-dependent aggregate morphologies. Adapted from ref (5). Copyright 2013 American
Chemical Society. (c) Cooling curves of majority-rules-based copolymerization
of two BTA enantiomers. Adapted from ref (6). Copyright 2010 American Chemical Society. (d)
Cooling curves and super-resolution microscopy indicating the formation
of supramolecular block copolymers from two triarylaminetriamide-based
monomers. Adapted from ref (7). Copyright 2018 American Chemical Society.
Examples of nonlinear
behavior in supramolecular (co)polymerizations.
(a) Cooling curves for C3-symmetric benzotrithiophenesBTT-F and BTT-5F with and without a sharp elongation temperature,
respectively, at various concentrations in water (data obtained from
ref (4)). (b) Cooling
curves for deuterated benzenetricarboxamides (BTAs) in heptane indicating
temperature-dependent aggregate morphologies. Adapted from ref (5). Copyright 2013 American
Chemical Society. (c) Cooling curves of majority-rules-based copolymerization
of two BTA enantiomers. Adapted from ref (6). Copyright 2010 American Chemical Society. (d)
Cooling curves and super-resolution microscopy indicating the formation
of supramolecular block copolymers from two triarylaminetriamide-based
monomers. Adapted from ref (7). Copyright 2018 American Chemical Society.Various models have been proposed in the literature
to describe
supramolecular (co)polymerizations. For the aggregation of a single
monomer type, kinetic and thermodynamic models have shown success
in distinguishing distinct mechanisms.[8−17] Models for the coassembly of multiple monomer types are typically
restricted to the thermodynamic equilibrium state and are often based
on statistical mechanical approaches using partition functions and
the transfer matrix method.[18−29] Here we advocate a more direct computation of the concentrations
of monomers in equilibrium occurring in copolymers via the law of
mass action. We provide a concise overview of the resulting mass-balance
models that we have derived[5,7,30−33] over the years to explain the experimentally observed effects in Figure . Following a didactic
approach, we start by introducing the mass-balance approach and subsequently
apply that to increasingly complex supramolecular (co)polymerizations.
Starting from aggregation of a single type of monomer into a single
aggregate type and proceeding through competitive formation of multiple
aggregate types and coassembly of two monomer types, we systematically
arrive at our recently published[34] most
general copolymerization model, which encompasses all of those earlier
models.
Thermodynamic Equilibrium of Chemical Reactions
The
equilibrium states of coupled chemical reactions have been
studied extensively in the literature. In the general case, m chemical species (“molecules”) M1, ..., M are built out of n building blocks (“atoms”) B1, . . ., B, where each species consists of a given fixed number of building
blocks and there exist r equilibrium reactions with
positive equilibrium constants between these species. The reactions
leave the number of building blocks invariant, i.e., for each reaction
the total number of building blocks occurring in the reactants equals
the total number of building blocks occurring in the products. The
task is to compute the concentrations of the various species in thermodynamic
equilibrium given the total amount of each building block.Consider
as an example the case with n = 2 building
blocks (A and B), m = 5 species (A, B, AB, AA, and
AAB), and r = 4 bimolecular equilibrium reactions
between these species, as illustrated in Figure a. The law of mass action dictates that in
equilibrium, for sufficiently dilute well-mixed systems, the concentrations
of the species satisfy the equilibrium conditions shown in Figure b. Apart from showing
that the concentrations of all species can be expressed in terms of
the concentrations of the free building blocks ([A] and [B]), these
equilibrium conditions imply that the four reactions are not independent.
Both routes to construct AAB lead to formulas for the concentration
of AAB in terms of the concentrations of A and B, and these relations
can only hold both if K1K3= K2K4. This is the detailed balance condition (see Wegscheider[35] and Onsager[36]), which
states in the general form that the product of the equilibrium constants
along two different reaction sequences leading to the same final result
must be equal. If the equilibrium constants K are related to the corresponding standard
free energy gains ΔG° by K = exp(−ΔG°/RT), the condition boils down to ΔG1° + ΔG3° = ΔG2° + ΔG4°. This means that the total gain in free energy is independent of
the route via which species AAB is formed (Figure c), which is required for the model to have
physical and chemical meaning.[37]
Figure 2
Example system
of coupled chemical equilibrium reactions illustrating
detailed balance and the mass-balance approach. (a) Reaction set for
the formation of AAB trimers from A and B monomers via bimolecular
equilibrium reactions. (b) The conditions on equilibrium concentrations.
(c) Free energy diagram. (d) Mass-balance equations for the two building
blocks A and B. (e) Equilibrium concentrations of the five species
in a titration experiment as solved from these two mass-balance equations
for ΔG1° = −21 kJ·mol–1, ΔG2° = −28 kJ·mol–1, and ΔG3° = −30 kJ·mol–1 at T = 293 K and a total concentration of 0.5 mM.
Example system
of coupled chemical equilibrium reactions illustrating
detailed balance and the mass-balance approach. (a) Reaction set for
the formation of AAB trimers from A and B monomers via bimolecular
equilibrium reactions. (b) The conditions on equilibrium concentrations.
(c) Free energy diagram. (d) Mass-balance equations for the two building
blocks A and B. (e) Equilibrium concentrations of the five species
in a titration experiment as solved from these two mass-balance equations
for ΔG1° = −21 kJ·mol–1, ΔG2° = −28 kJ·mol–1, and ΔG3° = −30 kJ·mol–1 at T = 293 K and a total concentration of 0.5 mM.Omitting any one of the four reactions will not
change the equilibrium
concentrations of the species. As it is impossible to omit more reactions
without changing the equilibrium state, this example constitutes three
independent reactions. The equilibrium concentrations of AA, AB, and
AAB are thus given by the first three relations in Figure b. These equations, which relate
the concentrations of the various species, are commonly denoted as
“mass-action laws”.The mass-action laws alone
are not sufficient to determine the
concentrations of all species for given total concentrations of the
building blocks A and B, i.e., atot and btot. To account for the total amounts of building
blocks A and B in the system, the notion of equivalent concentration
is introduced. The equivalent concentration of a building block in
a species is defined as the concentration of that building block that
results if that species is broken down into its individual building
blocks. For instance, in our example the equivalent concentrations
of A and B in AAB are 2[AAB] and [AAB], respectively, since each AAB
contains two A building blocks and only one B building block. Using
this notion of equivalent concentration, the mass-balance equations
can be formulated as follows:For each building block type, the sum of its equivalent concentrations
in all species must be equal to the given total building block concentration.If there is an independent reaction for each species
that is not
a building block, these equations have a unique solution.[38−40] The mass-balance equations form a set of nonlinear algebraic equations
that can be solved by a suitable numerical method. For the current
example, this leads to the mass-balance equations for [A] and [B]
provided in Figure d. In Figure e the
concentrations of all five species, found by numerically solving the
mass-balance equations, are shown as functions of the fraction of
B building blocks in the solution at constant overall concentration
of A and B. This illustrates that the mass-balance approach can be
used to delineate the concentrations of all individual species, which
can be nicely visualized in what we call speciation plots. Some other
examples of finite coassembly, fitted to experimental data, are given
in refs (41−44).In the sequel we will use this general scheme, which is thus
based
on the assumption that the reactions take place in a homogeneous mixture
of sufficiently dilute reactants, to derive models to investigate
the equilibrium properties of supramolecular (co)polymers, i.e., (co)assemblies
of monomers into one-dimensional aggregates that in principle can
grow unlimitedly long. These models thus do not describe metastable
(kinetically trapped) or other out-of-equilibrium states. We assume
that copolymers are directed, e.g., by the direction of intermonomeric
hydrogen bonds, from a bottom element to a top element and describe
their growth by a minimal independent set of reactions consisting
of dimerizations and elongations at the top. Other growth mechanisms
like monomer insertion/deletion[45] and/or
fragmentation/coagulation[46] may occur but
will not change the thermodynamic equilibrium state because of the
detailed balance conditions.
One-Component Supramolecular Polymerization
We start
by considering a single monomer type (A) that can aggregate
into a single polymer type. As pioneered by Oosawa and Kasai,[8] a set of independent reactions describing such
a supramolecular polymerization consists of a dimerization step (A
+ A ⇄ A2) and elongation steps (A + A ⇄ A), where A represents an aggregate consisting of i monomers. Though in principle the equilibrium constants
of all these reactions could be distinct, successful models include
the isodesmic case, where all of the equilibrium constants are equal,
and the cooperative case with two distinct equilibrium constants,
one for the first steps up to the formation of a critical nucleus
and the other for the subsequent elongation steps.[8,11,12,47−50]For the case with nucleus size = 2, the reaction scheme is
illustrated
in Figure a. The ratio
of the equilibrium constants for the nucleation step (Kn) and the elongation steps (Ke) determines the cooperativity of the system (σ = Kn/Ke). For σ < 1
the system is called cooperative, whereas for σ > 1 it is
called
anticooperative; for σ = 1 the isodesmic case is reobtained.
The difference among cooperative, isodesmic, and anticooperative aggregation
is elucidated by considering the total free energy gain (using K = exp(−ΔG°/RT)) in the construction
of a polymer as a function of the aggregate length (Figure f). For the isodesmic case,
where all of the equilibrium constants are equal, the aggregate’s
free energy decreases linearly with its length. For the cooperative
case, the free energy also decreases linearly for aggregate lengths
above the nucleus size but decreases slower or even increases up to
the nucleus size. Contrastingly, in the anticooperative case the energy
gain is largest in the nucleation steps.
Figure 3
Model for one-component
supramolecular polymerization. (a) Reaction
set. (b) Polymer equilibrium concentrations. (c) Mass balance equation.
(d) Cooling curves for isodemic (ΔHiso° = −65
kJ·mol–1 and ΔSiso° = −100
J·mol–1·K–1) and cooperative
(ΔHe° = −75 kJ·mol–1, ΔSe° = −133 J·mol–1·K–1, and NP = −30 kJ·mol–1) polymerizations for atot = 10 μM. (e) Mass distributions of those polymers at 293 K,
i.e., equivalent concentrations of monomers in polymers as a function
of the length of those polymers. (f) Schematic free energy diagram
for isodemic and (anti)cooperative polymerizations. (g) Fit of the
one-component model to experimental cooling curves for BTAs at three
different concentrations. Adapted with permission from ref (30). Copyright 2011 Springer
Nature.
Model for one-component
supramolecular polymerization. (a) Reaction
set. (b) Polymer equilibrium concentrations. (c) Mass balance equation.
(d) Cooling curves for isodemic (ΔHiso° = −65
kJ·mol–1 and ΔSiso° = −100
J·mol–1·K–1) and cooperative
(ΔHe° = −75 kJ·mol–1, ΔSe° = −133 J·mol–1·K–1, and NP = −30 kJ·mol–1) polymerizations for atot = 10 μM. (e) Mass distributions of those polymers at 293 K,
i.e., equivalent concentrations of monomers in polymers as a function
of the length of those polymers. (f) Schematic free energy diagram
for isodemic and (anti)cooperative polymerizations. (g) Fit of the
one-component model to experimental cooling curves for BTAs at three
different concentrations. Adapted with permission from ref (30). Copyright 2011 Springer
Nature.The concentrations of the A aggregates
can be computed from the reaction equilibria as [A2] = Kn[A]2 and [A] = Ke[A][A] for all i ≥ 2. Together this allows
the concentrations of all possible aggregates to be expressed as functions
of the monomer concentration (Figure b). The mass-balance implies that the total concentration
of A in the system (atot) should be equal
to the equilibrium monomer concentration ([A]) plus the sum of the
equivalent concentrations of A for aggregates of all different lengths.
Because the equivalent concentration of A in the aggregate A is given by i[A] and all of the [A] can thus
be expressed in terms of the monomer concentration, this yields a
single mass balance equation with the monomer concentration [A] as
a single unknown (Figure c). Using algebra, the summation over all polymer lengths
in this formula can be replaced by a single rational fraction (Figure c), which can be
solved by numerical or analytical methods. For given total concentration
of building blocks atot, this thus yields
the equilibrium monomer concentration [A], from which subsequently
the concentrations of all other polymers A can be computed, as well as properties such as the degree of polymerization
(φ = ∑∞i[A]/atot) and the distribution
of the polymer lengths.The mass-balance equation for this one-component
model has three
parameters, viz. the equilibrium constant Ke, the cooperativity σ, and the total monomer concentration atot. Varying these parameters and repeatedly
solving the mass-balance equation for each parameter combination allows
different speciation plots to be computed. For instance, if Ke and σ depend on the temperature T as Ke = exp(−ΔGe°/RT) and σ = exp(NP/RT),
where NP is the nucleation enthalpy penalty, the behavior of the system
as a function of temperature can be shown in a
cooling curve plot, such as in Figure d. Such cooling curves of the degree of polymerization
(Figure d) clearly
show that an isodesmic polymerization has a sigmoidal dependence on
the temperature, while the hallmark of a cooperative polymerization
is a sharp transition from only monomers above a so-called elongation
temperature (Te) to a sharp increase in
the amount of polymers below this temperature.[51] Both types of curves resemble experimentally obtained cooling
curves (e.g., Figure a), and in ref (31) we have released a tool to fit such experimental curves with this
one-component model (Figure g) to quantify the thermodynamic parameters of such supramolecular
polymerizations. Similarly, for a fixed temperature the behavior as
a function of the total concentration atot can be shown in a titration curve. This also shows much sharper
transitions for cooperative polymerization, where aggregates primarily
form above a critical concentration of 1/Ke, compared with isodesmic polymerization, where significant amounts
of monomers and aggregates coexist at all concentrations.[47] An additional advantage of the model is that
it allows one to zoom in on the individual polymers in the system.
For example, zooming in on the mass distribution at fixed temperature
and concentration shows that polymers that grow via a cooperative
mechanism are much longer than aggregates that grow via an isodesmic
mechanism (Figure e).
Pathway Complexity
A first generalization of the above
one-component model is the
case where a single monomer type A can form two distinct aggregate
types. Though the exact nature of the aggregates is irrelevant here,
we will denote these aggregates (with length i) as
J and H,
respectively, as the distinct aggregate types may for instance be
J-type coupled aggregates and helical aggregates. As an example we
consider the case that one polymer type (J) grows isodesmically while
the other polymer type (H) grows cooperatively (Figure a),[52] i.e., the
two cases considered in the previous section. It should be noted that
although there are no direct reactions between aggregates of the two
distinct polymer types, these aggregates are linked to each other
via the free monomers as they are built from the same monomer type.
Figure 4
Single
monomer type aggregating via competing pathways. (a) Reaction
set for the formation of isodesmic and cooperative aggregates from
the same monomer. (b) Conditions on the equilibrium concentrations.
(c) Cooling curves (parameters as in Figure ). (d) Monomer concentration, compared with
those of the pure isodesmic and pure cooperative systems. (e) Mass-balance
equation. (f) Fit to the data in Figure b. Adapted from ref (5). Copyright 2013 American
Chemical Society.
Single
monomer type aggregating via competing pathways. (a) Reaction
set for the formation of isodesmic and cooperative aggregates from
the same monomer. (b) Conditions on the equilibrium concentrations.
(c) Cooling curves (parameters as in Figure ). (d) Monomer concentration, compared with
those of the pure isodesmic and pure cooperative systems. (e) Mass-balance
equation. (f) Fit to the data in Figure b. Adapted from ref (5). Copyright 2013 American
Chemical Society.Analogous to the previous section, the concentrations
of all polymers
can be expressed in terms of the free monomer concentration [A] (see Figure b). Because a monomer should either be a free monomer or be present
in one of the J-aggregates or in one of the H-aggregates, the mass-balance
equation for this system states that the total concentration of A
in the system (atot) should be equal to
the equilibrium monomer concentration ([A]) plus the sum of the equivalent
concentrations of A for J-aggregates of all different lengths and
the sum of the equivalent concentrations of A for H-aggregates of
all different lengths (Figure e). Using algebra, the two summations over all polymer lengths
in this formula can be replaced by two single rational fractions,
after which the equation can be solved numerically, providing the
free monomer concentration [A] for a given atot.As an example, we consider the case where the temperature
dependence
of Ke is stronger than that of Kiso, leading to a temperature-dependent competition
between the J and H polymers. This competition results in a sharp
change in the occurring polymers at around T = 287
K (Figure c). This
sharp transition can be understood by zooming in on the temperature
dependence of the concentration of free monomer. Figure d shows the free monomer concentration
for this competition model along with the free monomer concentrations
for a model with only the isodesmic pathway and a model with exclusively
the cooperative pathway. Clearly, the monomer concentration in the
presence of the competing pathways follows the monomer concentration
for the aggregate type with the lowest monomer concentration. Consequently,
the dominant aggregate type changes at the temperature where the monomer
concentrations corresponding to the individual aggregate types cross,
i.e., close to the temperature where the free energies for the two
pathways are equal.[52]This mass-balance
approach can be adapted straightforwardly to
competition between two distinctly cooperative aggregate types[53] or to competition between cooperative and anticooperative
aggregate types[54] or even pure dimer formation.[55] The approach can also readily be extended to
more polymer types. An intriguing example thereof was provided by
Nakano et al.,[5] who studied the self-assembly
of BTAs with deuterium as the stereocenter (Figure b). From the fit with a model for the aggregation
of chiral BTAs in four different polymer types, i.e., two opposite
helicities for two types of helical polymers (denoted as 35 and 45,
respectively), the rather concentration-independent transition temperature
between regions II and III in Figure b appears to be the temperature at which the two polymer
types are equally stable (Figure f). Fitting these extended one-component models to
experimental data thus allows the elucidation of competing aggregate
types in supramolecular polymerizations and quantification of (small)
differences in stabilities between those aggregate types.
Majority Rules
A second generalization of the one-component
model is the extension
to multiple monomer types. A relatively simple but fascinating example
is the copolymerization of two enantiomers (the R and S enantiomers, denoted as R and S, respectively)
into helical supramolecular aggregates. If their stereocenter is sufficiently
close to the core of the supramolecular polymers, such enantiomers
will have a preference for aggregates with either P or M helical sense (denoted as P and M, respectively).
If the R enantiomers favor the P-type aggregates, their mirror-image S enantiomers
will favor the M-type aggregates. Aggregation of R enantiomers into P-type aggregates and
the equivalent aggregation of S enantiomers into M-type aggregates could be described using two independent
one-component models with the same equilibrium constants. However,
if the stereocenter is sufficiently small, R monomers
can also mix into M-type aggregates and, mutatis
mutandis, S monomers into P-type
helices. Such a copolymerization could be described (Figure a) by some additional dimerization
reactions to account for all possible dimers and, assuming that the
elongation of an aggregate is independent of its composition, just
two additional reactions for elongation of aggregates with their respective
nonpreferred enantiomers. The equilibrium constants for these elongations
with nonpreferred enantiomers can then be assumed to be a factor ν
= exp(MMP/RT) smaller than those for the preferred
enantiomers, where the mismatch penalty (MMP) is the energetic cost
of adding a monomer to an aggregate of its nonpreferred helicity compared
with its preferred helicity.
Figure 5
Majority-rules copolymerization. (a) Reaction
set for the supramolecular
polymerization of two enantiomers (R and S) into aggregates with two opposite helical senses (P and M). The gray parts represent aggregates of
arbitrary length and composition. (b) Equilibrium concentrations of
copolymers of both helical senses containing jR monomers and kS monomers.
(c) Mass-balance equations. (d) Fitting of the model (lines, ΔHe° = −66 kJ·mol–1, ΔSe° = −101.5
J·mol–1·K–1, NP = −35
kJ·mol–1, and MMP = −2.1 kJ·mol–1) to experimental CD titration curves (symbols). (e)
Speciation plot for the fit at 313 K. (f) Cooling curves corresponding
to data in Figure c. (g) Zoom in on the monomer concentrations in (e) explaining the
experimental observation of two time scales in racemization. Panels
(d–f) adapted with permission from ref (30). Copyright 2011 Springer
Nature.
Majority-rules copolymerization. (a) Reaction
set for the supramolecular
polymerization of two enantiomers (R and S) into aggregates with two opposite helical senses (P and M). The gray parts represent aggregates of
arbitrary length and composition. (b) Equilibrium concentrations of
copolymers of both helical senses containing jR monomers and kS monomers.
(c) Mass-balance equations. (d) Fitting of the model (lines, ΔHe° = −66 kJ·mol–1, ΔSe° = −101.5
J·mol–1·K–1, NP = −35
kJ·mol–1, and MMP = −2.1 kJ·mol–1) to experimental CD titration curves (symbols). (e)
Speciation plot for the fit at 313 K. (f) Cooling curves corresponding
to data in Figure c. (g) Zoom in on the monomer concentrations in (e) explaining the
experimental observation of two time scales in racemization. Panels
(d–f) adapted with permission from ref (30). Copyright 2011 Springer
Nature.The concentration p (respectively m) of each aggregate
type denoting a P-type (respectively M-type) aggregate
consisting of jR enantiomers and kS enantiomers can then be expressed in
terms of the free monomer concentrations [R] and [S] (Figure b). Because for both enantiomers
it again holds that the molecules should be present either as a monomer,
in one of the P-type aggregates, or in one of the M-type aggregates, two mass-balance equations can be derived
(Figure c) with the
free monomer concentrations [R] and [S] as the two unknowns, which
can be solved numerically for given overall concentrations rtot and stot, as
has been illustrated by Markvoort et al.[30] and ten Eikelder et al.[31]Solving
the mass-balance equations for different ratios of rtot and stot and
various temperatures thus allows cooling curves of for instance the
difference in equivalent concentrations of the P-
and M-type aggregates to be drawn (Figure f). As circular dichroism (CD)
spectroscopy probes such excess helical sense experimentally, those
model curves can be directly compared to the CD cooling curves at
different enantiomeric excesses (ee = (rtot – stot)/(rtot + stot)) in Figure c. Rather than as
a function of temperature, the CD could also be followed as a function
of ee. Figure d clearly shows that a small excess of one enantiomer leads
to a strong bias toward copolymers with helicity corresponding to
the major enantiomer and that the CD data for such a so-called majority-rules
experiment can be excellently fitted over a range of different temperatures
using only a single parameter, i.e., the MMP.[6] The other parameters (i.e., σ and Ke) were fixed at their values determined from fits to cooling curves
of enantiomerically pure solutions with the one-component model.While experimental CD spectra show only the difference in the amounts of material in P- and M-type helices, an advantage of the model is that it once
more allows a focus on the composition of the system. Figure e shows for 313 K not only
model results for Ptot – Mtot but also Ptot and Mtot individually as well as the
free monomer concentrations. Such a speciation plot shows that the
kink in the CD curves coincides with a critical ee (eecr)[30,31] above which
only the aggregates corresponding to the majority enantiomer are present,
while below this eecr both P- and M-type aggregates are present. Moreover, it
shows that the slope in the CD spectrum to the left of the kink corresponds
to the increase in the amount of P-type aggregates
at the expense of M-type aggregates, whereas the
slope in the CD spectrum to the right of the kink originates in a
stronger decrease in [S] than increase in [R] due to purer aggregates
at higher ee. Interestingly, it also shows that below eecr the free monomer concentrations of the two
enantiomers are almost equal, whereas above eecr these rapidly diverge.These highly nonlinear monomer
concentration profiles also explain
the intriguing base-catalyzed racemization observed by Cantekin et
al.,[32] which featured two distinct time
scales. Namely, zooming in on the monomer concentrations (Figure g) shows that below eecr the monomer concentration corresponding
to the majority enantiomer is still fractionally higher than that
of the minority enantiomer and that only at ee =
0 are the monomer concentrations exactly equal. As a result, a racemization
reaction that takes place only in the monomeric phase (i.e., R ⇄
S) will proceed fast above eecr and significantly
slower once the critical ee is reached. The same
work also showed deracemization by the addition of a third chiral
monomer type that copolymerizes along with the others but does not
racemize. Extension of the model with this third monomer type showed
that the final ee of this deracemization process
would be close to the above-mentioned eecr, predicting optimal deracemization for large MMP and cooperativity.
General Copolymerization
In the majority-rules system
considered in the previous section,
the equilibrium constants in the elongation phase (i.e., Ke and νKe) depended
on the type of monomer (R or S) and the type of copolymer to which
it was added (P or M). To model more general copolymerizations, it
is useful to assume that the equilibrium constants may also depend
on the top element of the copolymer before addition of the new monomer
and thus on both monomers between which a bond is broken or a new
bond is formed. The corresponding equilibrium constants can be written
as KPA–B for the elongation of
a copolymer PA (i.e., a copolymer P with arbitrary composition
but with an A at the top) with a monomer B, and similarly for the
other combinations. The full set of reactions for a single copolymer
type is shown in Figure a.
Figure 6
General copolymerization for one copolymer type. (a) Reaction set
for copolymerization of two monomer types A and B. (b) Recursive relation
for (equivalent) concentrations of copolymers with either an A or
B on top, with a = [A] and b = [B].
(c) Total equivalent concentrations of A and B in aggregates. (d)
Mass-balance equations. (e) Model-predicted cooling curves for different
ΔHcopol values. (f) Speciation plot
for ΔHcopol = −9 kJ·mol–1 and CD data. (g) Bond fractions as functions of ΔHcopol. In (e–g), ΔHAA = −53 kJ·mol–1, NPA = −40 kJ·mol–1, ΔHBB = −50 kJ·mol–1, NPB = −20 kJ·mol–1, ΔSAA = ΔSBB =
ΔSAB= ΔSBA = −60 J·mol–1·K–1, and atot = btot = 25 μM. Panels (e) and (f) adapted from ref (7). Copyright 2018 American
Chemical Society.
General copolymerization for one copolymer type. (a) Reaction set
for copolymerization of two monomer types A and B. (b) Recursive relation
for (equivalent) concentrations of copolymers with either an A or
B on top, with a = [A] and b = [B].
(c) Total equivalent concentrations of A and B in aggregates. (d)
Mass-balance equations. (e) Model-predicted cooling curves for different
ΔHcopol values. (f) Speciation plot
for ΔHcopol = −9 kJ·mol–1 and CD data. (g) Bond fractions as functions of ΔHcopol. In (e–g), ΔHAA = −53 kJ·mol–1, NPA = −40 kJ·mol–1, ΔHBB = −50 kJ·mol–1, NPB = −20 kJ·mol–1, ΔSAA = ΔSBB =
ΔSAB= ΔSBA = −60 J·mol–1·K–1, and atot = btot = 25 μM. Panels (e) and (f) adapted from ref (7). Copyright 2018 American
Chemical Society.The formulation of the mass-balance equations for
this case is
somewhat more complicated, as the dependence of the equilibrium constants
in the elongation phase on the top of the copolymer necessitates separate
treatment of copolymers with top A and top B. Let cA and cB be the concentrations of copolymers
of length i with top A and top B, respectively. Moreover,
let aA and aB represent the
equivalent concentrations of A in those copolymers of length i with top A and top B, respectively, and bA and bB the corresponding equivalent concentrations
of B. These six variables can be computed by an iteration process
with a 6 × 6 matrix (Figure b). The total equivalent concentration of A in copolymers, Ptot,A, i.e., the sum of equivalent concentrations
of A in all copolymers of all lengths with top A as well as those
with top B (Figure c), can now be computed with matrix algebra. In the same way, the
total equivalent concentration of B in copolymers, Ptot,B, can be computed. The two resulting mass-balance
equations (Figure d) formalize again that each monomer is either a free monomer or
occurs in some copolymer. These equations, with free monomer concentrations
[A] and [B] as unknowns, can be solved numerically.An interesting
example of a copolymerization is the mixture of
two triarylaminetriamide-based supramolecular copolymers[7] (Figure d), which individually form supramolecular polymers, with
one having higher cooperativity and a higher elongation temperature
than the other. The parameters for the A homopolymers (KPA–A and KA–A) and for the B homopolymers (KPB–B and KB–B) were selected on the
basis of experimental homopolymercooling curves. If it is assumed
that the (co)polymers can grow at both ends with the same equilibrium
constants, the only free parameter is the equilibrium constant KPA–B, which is described with an interaction
enthalpy ΔHAB. The relative strength
of the homopolymer versus the heteropolymer interaction can be described
by ΔHcopol = ΔHAA + ΔHBB – ΔHAB – ΔHBA. In Figure e the
resulting equivalent concentration of polymerized material (i.e., Ptot = Ptot,A + Ptot,B) is shown for four different values of
ΔHcopol, of which −9 kJ/mol
resulted in the best agreement with the experimental CD data (Figure f). The advantage
of the model is that apart from the overall degree of polymerization,
also the temperature-dependent composition of the supramolecular copolymers
can be followed (Figure f). This shows that at temperatures above the elongation temperature
of the weakest homopolymerization, those monomers can already mix
into aggregates nucleated from the other monomers, and that the ratio
between the two monomer types in the polymers is highly nonlinear
with temperature. Moreover, another characteristic of the internal
structure of the copolymers that can be extracted from the model is
the fractions of the various possible bonds. Figure g shows that depending on ΔHcopol the copolymers range from self-sorted
via blocky and random to alternating polymers, with ΔHcopol = −9 kJ/mol that gave the best
fit to the experimental data corresponding to a blocky structure.
These examples clearly show that extensions of the mass-balance model
to two components allow the rationalization and quantification of
various effects in supramolecular copolymerizations.
Conclusion
We have derived step-by-step a series of
mass-balance models describing
increasingly complex supramolecular (co)polymerizations and have shown
how these models have helped to provide an increased understanding
of the molecular basis of supramolecular aggregation. We recently
extended the latter of these models to multiple aggregate types, where
the binding free energy of each pair of monomer types in each aggregate
type can be set independently.[34] The resulting
model encompasses all mass-balance models for supramolecular (co)polymerizations
presented here and gives a general method to model supramolecular
(co)polymerization. Though in principle it could be extended further
to more than two monomer types or to the case that the equilibrium
constants in copolymerization depend on the added monomer and the
top k (k = 2, 3, ...) elements of
the copolymer, so far we have refrained from doing this given the
many new parameters. In ref (34), MATLAB scripts have also been provided to solve the model
numerically for any (co)polymerization of one or two types of monomer
into an arbitrary number of distinct aggregate types as well as to
calculate (co)polymer properties such as the average length, the fractions
of bonds between specific monomer types, and the average length of
blocks of one monomer type. We most recently applied these scripts
to delineate the copolymerization of chiral and achiral analogues
of BTA and thio-BTA in modified types of sergeant-and-soldiers and
majority-rules experiments[56] as well as
to investigate the effect of competitive sequestration, chain capping,
and intercalation on supramolecular polymer lengths.[57] Moreover, these scripts also allow other interested researchers
to apply mass-balance models to rationalize their current and future
supramolecular (co)polymerization systems. We envision that this will
help to unravel a wealth of other phenomena in supramolecular (co)polymerizations
in the future.
Authors: Peter A Korevaar; Subi J George; Albert J Markvoort; Maarten M J Smulders; Peter A J Hilbers; Albert P H J Schenning; Tom F A De Greef; E W Meijer Journal: Nature Date: 2012-01-18 Impact factor: 49.962
Authors: Nicolas M Casellas; Sílvia Pujals; Davide Bochicchio; Giovanni M Pavan; Tomás Torres; Lorenzo Albertazzi; Miguel García-Iglesias Journal: Chem Commun (Camb) Date: 2018-04-19 Impact factor: 6.222
Authors: Albert J Markvoort; Huub M M ten Eikelder; Peter A J Hilbers; Tom F A de Greef; E W Meijer Journal: Nat Commun Date: 2011-10-25 Impact factor: 14.919
Authors: Anindita Das; Ghislaine Vantomme; Albert J Markvoort; Huub M M Ten Eikelder; Miguel Garcia-Iglesias; Anja R A Palmans; E W Meijer Journal: J Am Chem Soc Date: 2017-05-16 Impact factor: 15.419
Authors: Lafayette N J de Windt; Chidambar Kulkarni; Huub M M Ten Eikelder; Albert J Markvoort; E W Meijer; Anja R A Palmans Journal: Macromolecules Date: 2019-09-26 Impact factor: 5.985
Authors: Lafayette N J de Windt; Zulema Fernández; Manuel Fernández-Míguez; Félix Freire; Anja R A Palmans Journal: Chemistry Date: 2021-12-02 Impact factor: 5.020