Literature DB >> 31748968

Compound heterozygous mutations in SNAP29 is associated with Pelizaeus-Merzbacher-like disorder (PMLD).

Lorida Llaci1,2, Keri Ramsey1,2, Newell Belnap1,2, Ana M Claasen1,2, Chris D Balak1,2, Szabolcs Szelinger1,2, Wayne M Jepsen1,2, Ashley L Siniard1,2, Ryan Richholt1,2, Tyler Izat1, Marcus Naymik1,2, Matt De Both1,2, Ignazio S Piras1,2, David W Craig1,2,3, Matthew J Huentelman1,2, Vinodh Narayanan1,2, Isabelle Schrauwen4,5,6, Sampathkumar Rangasamy7,8.   

Abstract

Pelizaeus-Merzbacher-like disease (PMLD) is an autosomal recessive hypomyelinating leukodystrophy, which is clinically and radiologically similar to X-linked Pelizaeus-Merzbacher disease (PMD). PMLD is characterized by early-onset nystagmus, delayed development (motor delay, speech delay and dysarthria), dystonia, hypotonia typically evolving into spasticity, ataxia, seizures, optic atrophy, and diffuse leukodystrophy on magnetic resonance imaging (MRI). We identified a 12-year-old Caucasian/Hispanic male with the classical clinical characteristics of PMLD with lack of myelination of the subcortical white matter, and absence of the splenium of corpus callosum. Exome sequencing in the trio revealed novel compound heterozygous pathogenic mutations in SNAP29 (p.Leu119AlafsX15, c.354DupG and p.0?, c.2T > C). Quantitative analysis of the patient's blood cells through RNA sequencing identified a significant decrease in SNAP29 mRNA expression, while western blot analysis on fibroblast cells revealed a lack of protein expression compared to parental and control cells. Mutations in SNAP29 have previously been associated with cerebral dysgenesis, neuropathy, ichthyosis, and keratoderma (CEDNIK) syndrome. Typical skin features described in CEDNIK syndrome, such as generalized ichthyosis and keratoderma, were absent in our patient. Moreover, the early onset nystagmus and leukodystrophy were consistent with a PMLD diagnosis. These findings suggest that loss of SNAP29 function, which was previously associated with CEDNIK syndrome, is also associated with PMLD. Overall, our study expands the genetic spectrum of PMLD.

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Year:  2019        PMID: 31748968     DOI: 10.1007/s00439-019-02077-7

Source DB:  PubMed          Journal:  Hum Genet        ISSN: 0340-6717            Impact factor:   4.132


  32 in total

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5.  PLP1 gene duplication as a cause of the classic form of Pelizaeus-Merzbacher disease - case report.

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6.  SNAP-29: a general SNARE protein that inhibits SNARE disassembly and is implicated in synaptic transmission.

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Journal:  Proc Natl Acad Sci U S A       Date:  2001-11-13       Impact factor: 11.205

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Journal:  J Med Genet       Date:  2012-12-11       Impact factor: 6.318

8.  Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2.

Authors:  Michael I Love; Wolfgang Huber; Simon Anders
Journal:  Genome Biol       Date:  2014       Impact factor: 13.583

9.  HTSeq--a Python framework to work with high-throughput sequencing data.

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Journal:  Bioinformatics       Date:  2014-09-25       Impact factor: 6.937

10.  Analysis of protein-coding genetic variation in 60,706 humans.

Authors:  Monkol Lek; Konrad J Karczewski; Eric V Minikel; Kaitlin E Samocha; Eric Banks; Timothy Fennell; Anne H O'Donnell-Luria; James S Ware; Andrew J Hill; Beryl B Cummings; Taru Tukiainen; Daniel P Birnbaum; Jack A Kosmicki; Laramie E Duncan; Karol Estrada; Fengmei Zhao; James Zou; Emma Pierce-Hoffman; Joanne Berghout; David N Cooper; Nicole Deflaux; Mark DePristo; Ron Do; Jason Flannick; Menachem Fromer; Laura Gauthier; Jackie Goldstein; Namrata Gupta; Daniel Howrigan; Adam Kiezun; Mitja I Kurki; Ami Levy Moonshine; Pradeep Natarajan; Lorena Orozco; Gina M Peloso; Ryan Poplin; Manuel A Rivas; Valentin Ruano-Rubio; Samuel A Rose; Douglas M Ruderfer; Khalid Shakir; Peter D Stenson; Christine Stevens; Brett P Thomas; Grace Tiao; Maria T Tusie-Luna; Ben Weisburd; Hong-Hee Won; Dongmei Yu; David M Altshuler; Diego Ardissino; Michael Boehnke; John Danesh; Stacey Donnelly; Roberto Elosua; Jose C Florez; Stacey B Gabriel; Gad Getz; Stephen J Glatt; Christina M Hultman; Sekar Kathiresan; Markku Laakso; Steven McCarroll; Mark I McCarthy; Dermot McGovern; Ruth McPherson; Benjamin M Neale; Aarno Palotie; Shaun M Purcell; Danish Saleheen; Jeremiah M Scharf; Pamela Sklar; Patrick F Sullivan; Jaakko Tuomilehto; Ming T Tsuang; Hugh C Watkins; James G Wilson; Mark J Daly; Daniel G MacArthur
Journal:  Nature       Date:  2016-08-18       Impact factor: 49.962

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  5 in total

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Journal:  Hum Genet       Date:  2021-05-04       Impact factor: 4.132

2.  New Cohort of Patients With CEDNIK Syndrome Expands the Phenotypic and Genotypic Spectra.

Authors:  Annelise Y Mah-Som; Cristina Skrypnyk; Andrea Guerin; Raafat Hammad Seroor Jadah; Vinayak Nivrutti Vardhan; Robert C McKinstry; Marwan S Shinawi
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Review 3.  Sugary Logistics Gone Wrong: Membrane Trafficking and Congenital Disorders of Glycosylation.

Authors:  Peter T A Linders; Ella Peters; Martin Ter Beest; Dirk J Lefeber; Geert van den Bogaart
Journal:  Int J Mol Sci       Date:  2020-06-30       Impact factor: 5.923

4.  Novel Mutations in NPC1 are Associated with Pelizaeus-Merzbacher-Like Disease: A Case Report.

Authors:  Hongling Fu; Qiu Wang; Hanmin Liu
Journal:  Int J Gen Med       Date:  2021-03-09

Review 5.  Getting Sugar Coating Right! The Role of the Golgi Trafficking Machinery in Glycosylation.

Authors:  Zinia D'Souza; Farhana Taher Sumya; Amrita Khakurel; Vladimir Lupashin
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  5 in total

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