Literature DB >> 31742246

Non-proteinaceous hydrolase comprised of a phenylalanine metallo-supramolecular amyloid-like structure.

Pandeeswar Makam1, Sharma S R K C Yamijala2, Kai Tao1, Linda J W Shimon3, David S Eisenberg4, Michael R Sawaya4, Bryan M Wong2,5, Ehud Gazit1,6.   

Abstract

Enzymatic activity is crucial for various technological applications, yet the complex structures and limited stability of enzymes often hinder their use. Hence, de novo design of robust biocatalysts that are much simpler than their natural counterparts and possess enhanced catalytic activity has long been a goal in biotechnology. Here, we present evidence for the ability of a single amino acid to self-assemble into a potent and stable catalytic structural entity. Spontaneously, phenylalanine (F) molecules coordinate with zinc ions to form a robust, layered, supramolecular amyloid-like ordered architecture (F-Zn(ii)) and exhibit remarkable carbonic anhydrase-like catalytic activity. Notably, amongst the reported artificial biomolecular hydrolases, F-Zn(ii) displays the lowest molecular mass and highest catalytic efficiency, in addition to reusability, thermal stability, substrate specificity, stereoselectivity and rapid catalytic CO2 hydration ability. Thus, this report provides a rational path towards future de novo design of minimalistic biocatalysts for biotechnological and industrial applications.

Entities:  

Year:  2019        PMID: 31742246      PMCID: PMC6861134          DOI: 10.1038/s41929-019-0348-x

Source DB:  PubMed          Journal:  Nat Catal


  43 in total

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Journal:  Acta Crystallogr D Biol Crystallogr       Date:  1997-05-01

2.  Structural biology. Dynamic visions of enzymatic reactions.

Authors:  Michele Vendruscolo; Christopher M Dobson
Journal:  Science       Date:  2006-09-15       Impact factor: 47.728

Review 3.  Self-assembled peptide nanostructures: the design of molecular building blocks and their technological utilization.

Authors:  Ehud Gazit
Journal:  Chem Soc Rev       Date:  2007-05-02       Impact factor: 54.564

4.  A self-assembled nanofiber catalyst for ester hydrolysis.

Authors:  Mustafa O Guler; Samuel I Stupp
Journal:  J Am Chem Soc       Date:  2007-09-14       Impact factor: 15.419

Review 5.  Protein design, a minimalist approach.

Authors:  W F DeGrado; Z R Wasserman; J D Lear
Journal:  Science       Date:  1989-02-03       Impact factor: 47.728

6.  Switchable Hydrolase Based on Reversible Formation of Supramolecular Catalytic Site Using a Self-Assembling Peptide.

Authors:  Chunqiu Zhang; Ramim Shafi; Ayala Lampel; Douglas MacPherson; Charalampos G Pappas; Vishal Narang; Tong Wang; Charles Maldarelli; Rein V Ulijn
Journal:  Angew Chem Int Ed Engl       Date:  2017-10-11       Impact factor: 15.336

7.  The amyloid architecture provides a scaffold for enzyme-like catalysts.

Authors:  Z S Al-Garawi; B A McIntosh; D Neill-Hall; A A Hatimy; S M Sweet; M C Bagley; L C Serpell
Journal:  Nanoscale       Date:  2017-08-03       Impact factor: 7.790

8.  Functional metabolite assemblies-a review.

Authors:  Ruth Aizen; Kai Tao; Sigal Rencus-Lazar; Ehud Gazit
Journal:  J Nanopart Res       Date:  2018-05-01       Impact factor: 2.253

Review 9.  Minimalistic peptide supramolecular co-assembly: expanding the conformational space for nanotechnology.

Authors:  Pandeeswar Makam; Ehud Gazit
Journal:  Chem Soc Rev       Date:  2018-05-21       Impact factor: 54.564

10.  Hydrolytic catalysis and structural stabilization in a designed metalloprotein.

Authors:  Melissa L Zastrow; Anna F A Peacock; Jeanne A Stuckey; Vincent L Pecoraro
Journal:  Nat Chem       Date:  2011-11-27       Impact factor: 24.427

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  12 in total

1.  Semi-Rationally Designed Short Peptides Self-Assemble and Bind Hemin to Promote Cyclopropanation.

Authors:  Oleksii Zozulia; Ivan V Korendovych
Journal:  Angew Chem Int Ed Engl       Date:  2020-03-17       Impact factor: 15.336

2.  Supramolecule self-assembly synthesis of amyloid phenylalanine-Cu fibrils with laccase-like activity and their application for dopamine determination.

Authors:  Mengxuan Liu; Jian-Hang Yin; Chengwu Lan; Lei Meng; Na Xu
Journal:  Mikrochim Acta       Date:  2022-02-11       Impact factor: 5.833

Review 3.  Nanozyme-based colorimetric biosensor with a systemic quantification algorithm for noninvasive glucose monitoring.

Authors:  Hee-Jae Jeon; Hyung Shik Kim; Euiheon Chung; Dong Yun Lee
Journal:  Theranostics       Date:  2022-09-07       Impact factor: 11.600

4.  Self-Assembling Catalytic Peptide Nanomaterials Capable of Highly Efficient Peroxidase Activity.

Authors:  Oleksii Zozulia; Liam R Marshall; Inhye Kim; Eric M Kohn; Ivan V Korendovych
Journal:  Chemistry       Date:  2021-02-26       Impact factor: 5.236

5.  Biocatalysts Based on Peptide and Peptide Conjugate Nanostructures.

Authors:  Ian W Hamley
Journal:  Biomacromolecules       Date:  2021-04-12       Impact factor: 6.988

Review 6.  Catalytic amyloids: Is misfolding folding?

Authors:  Liam R Marshall; Ivan V Korendovych
Journal:  Curr Opin Chem Biol       Date:  2021-08-20       Impact factor: 8.972

7.  Tripeptide Self-Assembly into Bioactive Hydrogels: Effects of Terminus Modification on Biocatalysis.

Authors:  Marina Kurbasic; Ana M Garcia; Simone Viada; Silvia Marchesan
Journal:  Molecules       Date:  2020-12-31       Impact factor: 4.411

Review 8.  Hierarchical self-assembly of aromatic peptide conjugates into supramolecular polymers: it takes two to tango.

Authors:  Maëva Coste; Esteban Suárez-Picado; Sébastien Ulrich
Journal:  Chem Sci       Date:  2021-12-10       Impact factor: 9.825

9.  Single amino acid bionanozyme for environmental remediation.

Authors:  Pandeeswar Makam; Sharma S R K C Yamijala; Venkata S Bhadram; Linda J W Shimon; Bryan M Wong; Ehud Gazit
Journal:  Nat Commun       Date:  2022-03-21       Impact factor: 17.694

10.  On-off transition and ultrafast decay of amino acid luminescence driven by modulation of supramolecular packing.

Authors:  Zohar A Arnon; Topaz Kreiser; Boris Yakimov; Noam Brown; Ruth Aizen; Shira Shaham-Niv; Pandeeswar Makam; Muhammad Nawaz Qaisrani; Emiliano Poli; Antonella Ruggiero; Inna Slutsky; Ali Hassanali; Evgeny Shirshin; Davide Levy; Ehud Gazit
Journal:  iScience       Date:  2021-06-12
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