| Literature DB >> 31736887 |
Juan Du1,2, Jing Luo1, Jingjing Huang1,2, Chengmin Wang3, Meng Li1, Bojun Wang4, Bo Wang1, Han Chang1, Jianwei Ji4, Keya Sen5, Hongxuan He1.
Abstract
Campylobacter jejuni (C. jejuni) is considered as an opportunistic zoonotic pathogen that may cause gastroenteritis in humans and other animals. Wild birds may be as potential vectors of C. jejuni around urban and suburban areas. Here, 520 samples were collected from 33 wild bird species in urban and suburban areas, Beijing. In total 57 C. jejuni were isolated from seven species. It was found that Nineteen (33.33%, 19/57) isolates were resistant to at least one of 11 antibiotics, especially streptomycin (36.84%) and four isolates resistant to all. Nineteen (33.33%, 19/57) isolates were multi-drug resistance. Multilocus sequence typing (MLST) analysis of the isolates showed that 36 different sequence types (STs) belonged to four Clonal complexes and unassigned. Twenty STs (55.56%) and six alleles among them were first detected. Virulence genes including flaA, cadF, and the cytolethal distending toxin (CDT) gene cluster, were detected in all isolates, but truncated cdt gene clusters only detected in the isolates from the crow, daurian jackdaw and silver pheasant. In conclusion, it was the first detection of C. jejuni involved truncated cdt gene clusters from the silver pheasant. These wild birds around urban and suburban areas may pose potential public health problems as reservoir vectors of C. jejuni.Entities:
Keywords: CDT gene cluster; Campylobacter jejuni; MLST; emergence; multi-resistance; wild birds
Year: 2019 PMID: 31736887 PMCID: PMC6829156 DOI: 10.3389/fmicb.2019.02433
Source DB: PubMed Journal: Front Microbiol ISSN: 1664-302X Impact factor: 5.640
FIGURE 1Samples collect sites and species in Beijing, China. Green represent Suburb area, Beijing; fleshcolor represent Urban area, Beijing. Images around the map of Beijing represent 33 species and the small icons represent 11 different sites. The data in the box represent the rate of the positive C. jejuni samples from different species and sites. Red tetragon represent crows and daurian jackdaws of family Corvids have significantly high positive rate than other species (P < 0.007). BNU, Beijing Normal University; BP, Beihai Park; THP, Temple of Heaven Park; CP, Cuihu Park; BWRC, Beijng Wildlife rescue center; BWP, Beijing Wildlife Park; MP, Milu Park; NWP, Niukouyu Wetland Park; BRRC, Beijing Raptor rescue center; WDL, Wild Duck Lake; HL, Hongluo Lake; XR, Xiyu Reservoir.
Prevalence of Campylobacter jejuni isolates from different species.
| Accipitridae | European Sparrowhawk ( | 3 | 0 | Falconidae | Eurasian Kestrel ( | 19 | 0 |
| Accipitridae | Gray-faced Buzzard ( | 1 | 0 | Falconidae | Eurasian Hobby ( | 7 | 0 |
| Accipitridae | Eurasian Goshawk ( | 1 | 0 | Falconidae | Peregrine Falcon ( | 2 | 0 |
| Accipitridae | Common Buzzard ( | 7 | 0 | Falconidae | Red feet falcon ( | 2 | 0 |
| Anatidae | Mallard ( | 70 | 9% | Gruidae | Crane ( | 22 | 0 |
| Anatidae | Mandarin duck ( | 16 | 6.25% | Laridae | Herring Gull ( | 46 | 0 |
| Anatidae | Black Swan ( | 8 | 12.50% | Paridae | Sparrow ( | 50 | 0 |
| Anatidae | Swan Goose ( | 10 | 0 | Phasianidae | Silver Pheasant ( | 7 | 14.29% |
| Anatidae | Bar-headed Goose ( | 7 | 0 | Phasianidae | Common Peafowl ( | 31 | 0 |
| Anatidae | Mute Swan ( | 4 | 0 | Strigidae | European Scops Owl ( | 12 | 0 |
| Anatidae | Swan ( | 3 | 0 | Strigidae | Long-eared Owl ( | 2 | 0 |
| Ardeidae | Gray Heron ( | 23 | 0 | Strigidae | Little Owl ( | 1 | 0 |
| Columbidae | Rock Pigeon ( | 26 | 7.69% | Strigidae | Eagle owl ( | 2 | 0 |
| Corvidae | Crow ( | 62 | 24% | Strigidae | Tawny Owl ( | 1 | 0 |
| Corvidae | Daurian Jackdaw ( | 60 | 52% | Struthionidae | Common Ostrich ( | 3 | 0 |
| Corvidae | Magpie ( | 1 | 0 | Sturnidae | Crested Myna ( | 7 | 0 |
| Falconidae | Saker falcon ( | 4 | 0 |
Prevalence of Campylobacter jejuni isolates from different sites.
| BNU | 20 | 55.00 | ||
| Urban area | BRRC | 64 | 0.00 | 17.81 |
| BP | 16 | 6.25 | ||
| THP | 40 | 10.00 | ||
| BWRC | 72 | 5.56 | ||
| CP | 90 | 27.78 | ||
| BWP | 10 | 10.00 | ||
| Suburb area | WDL | 22 | 0.00 | 7.56 |
| HL | 7 | 0.00 | ||
| MP | 98 | 7.14 | ||
| NWP | 40 | 10.00 | ||
| XR | 41 | 0.00 |
Clonal complex (CC) and sequence type (ST) distribution of Campylobacter in wild bird species.
| 52 | 52 | 1 | Black Swan (1) | BERC |
| 692 | 692 | 1 | Mandarin Duck (1) | BP |
| 991 | 2 | Mallard (2) | NWP | |
| 1 | Mallard (1) | BWSC | ||
| 952 | 2 | Crow (2) | THP | |
| 1275 | 1540 | 1 | Daurian Jackdaw (1) | CP |
| U | 448 | 4 | Daurian Jackdaw (4) | MP |
| 951 | 1 | Daurian Jackdaw (1) | CP | |
| 953 | 2 | Daurian Jackdaw (2) | CP | |
| 995 | 1 | Mallard (1) | CP | |
| 999 | 1 | Daurian Jackdaw (1) | CP | |
| 2367 | 2 | Pigeon (2) | NWP | |
| 3938 | 1 | Daurian Jackdaw (1) | CP | |
| 4069 | 1 | Daurian Jackdaw (1) | CP | |
| 4382 | 2 | Crow (2) | BNU | |
| 4571 | 1 | Crow (1) | BNU | |
| 6168 | 1 | Daurian Jackdaw (1) | CP | |
| 7805 | 1 | Daurian Jackdaw (1) | CP | |
| 4 | Crow (4) | BNU | ||
| 2 | Daurian Jackdaw (2) | MP/CP | ||
| 2 | Daurian Jackdaw (1) | MP | ||
| 1 | Daurian Jackdaw (1) | CP | ||
| 2 | Daurian Jackdaw (2) | CP | ||
| 1 | Daurian Jackdaw (2) | CP | ||
| 1 | Daurian Jackdaw (2) | CP | ||
| 2 | Daurian Jackdaw (2) | CP | ||
| 1 | Daurian Jackdaw (2) | CP | ||
| 2 | Daurian Jackdaw (2) | CP | ||
| 1 | Daurian Jackdaw (2) | CP | ||
| 2 | Mallard (2) | BWRC | ||
| 2 | Crow (2) | BNU | ||
| 1 | Daurian Jackdaw (2) | CP | ||
| 1 | Daurian Jackdaw (3) | CP | ||
| 2 | Crow (2) | THP/BNU | ||
| 2 | Crow (3) | THP | ||
| 2 | Daurian Jackdaw (1) | CP | ||
| Silver Pheasant (1) | BWP |
Sequence types (STs) and their association certain species and area.
| 52 | Human stool | United Kingdom/United States/Brazil/Israel/Botswana/ | 995 | Human stool | Sweden |
| Germany/Sweden/Luxembourg/ | Wild birds | Sweden/Finland | |||
| Switzerland/Canada/Japan/ | Chicken | Canada/Sweden/United Kingdom | |||
| The Netherlands/Australia/Greece | Duck | New Zealand | |||
| Sheep | United Kingdom | ||||
| Chicken | United Kingdom/United States/New Zealand/ | 3938 | Human stool | Sweden | |
| Spain/Luxembourg/ | |||||
| Senegal/Switzerland/Uruguay | 4069 | Human stool | Canada | ||
| Cattle | United Kingdom | ||||
| Xiangjiang River | 953 | Wild birds | United Kingdom | ||
| Monkey | |||||
| 999 | Starling | United Kingdom | |||
| 692 | Human stool | United Kingdom | Wild birds | United Kingdom | |
| Goose | United Kingdom | ||||
| Chicken | The Netherlands/ | 4382 | Wild birds | Canada | |
| Luxembourg/China | |||||
| Wild birds | Sweden | 4571 | / | Finland | |
| Environmental waters | United States/New Zealand | ||||
| 6168 | Environmental waters | Luxembourg | |||
| 991 | Human stool | United Kingdom/Luxembourg/ | |||
| New Zealand/Germany | 7805 | Wild birds | Finland | ||
| Environmental waters | Canada | ||||
| Human stool | United Kingdom/United States | ||||
| Wild birds | Sweden/New Zealand/Finland | ||||
| Chicken | United Kingdom | ||||
| Sheep | New Zealand | ||||
| Environmental waters | Canada | ||||
| 1540 | Human stool | United Kingdom | |||
| Chicken | United Kingdom | ||||
| Environmental waters | Luxembourg | ||||
| Wild birds | United States/Japan | ||||
| 448 | Human stool | United Kingdom/Switzerland/Sweden | |||
| Wild birds | United Kingdom/Japan/United States | ||||
| Environmental waters | Canada/The Netherlands/France | ||||
| 951 | Human stool | United Kingdom | |||
| Wild birds | United Kingdom | ||||
| 2367 | Human stool | United Kingdom | |||
| Chicken | Germany | ||||
FIGURE 2Frequency of resistance to 11 antibiotics among the 57 Campylobacter jejuni isolates. R represents resistant, I represents intermediate, S represents sensitive. AZI, azithromycin; NAL, nalidixic acid; CIP, ciprofloxacin; GEN, gentamicin, STR, streptomycin; CHL, streptomycin, FLO, florfenicol; TET, tetracycline, TEL, telithromycin, CLI, clindamycin; ERY, erythromycin.
Prevalence of antibiotic resistance among different species.
| Crow (15) | 60.00% (9/15) | 60.00% (9/15) | 26.67% (4/15) | 60.00% (9/15) | 6.67% (1/15) | 26.67% (4/15) | 26.67% (14/15) | 13.33% (2/15) | 20.00% (3/15) | 26.67% (4/15) | 33.33% (5/15) |
| Daurian Jackdaw (31) | 0.00% (0/31) | 6.45% (2/31) | 6.45% (2/31) | 6.45% (2/31) | 0.00% (0/31) | 0.00% (0/31) | 3.23% (1/31) | 9.68% (3/31) | 6.45% (2/31) | 0.00% (0/31) | 6.45% (2/31) |
| Balck Swan (1) | 100.00% (1/1) | 100.00% (1/1) | 100.00% (1/1) | 100.00% (1/1) | 0.00% (0/1) | 0.00% (0/1) | 100.00% (1/1) | 0.00% (0/1) | 0.00% (0/1) | 0.00% (0/1) | 100.00% (1/1) |
| Sliver Pheasant (1) | 100.00% (1/1) | 100.00% (1/1) | 100.00% (1/1) | 0.00% (0/1) | 0.00% (0/1) | 100.00% (1/1) | 0.00% (0/1) | 0.00% (0/1) | 0.00% (0/1) | 0.00% (0/1) | 100.00% (1/1) |
| Mallard (6) | 50.00% (3/6) | 50.00% (3/6) | 83.33% (5/6) | 50.00% (3/6) | 16.67% (1/6) | 16.67% (1/6) | 50.00% (3/6) | 33.33% (2/6) | 33.33% (2/6) | 33.33% (2/6) | 50.00% (3/6) |
| Mandarin duck (1) | 100.00% (1/1) | 100.00% (1/1) | 100.00% (1/1) | 100.00% (1/1) | 0.00% (0/1) | 0.00% (0/1) | 100.00% (1/1) | 100.00% (1/1) | 0.00% (0/1) | 0.00% (0/1) | 100.00% (1/1) |
| Rock Pigeon (2) | 100.00% (2/2) | 100.00% (2/2) | 100.00% (2/2) | 100.00% (2/2) | 100.00% (2/2) | 100.00% (2/2) | 100.00% (2/2) | 100.00% (2/2) | 100.00% (2/2) | 100.00% (2/2) | 100.00% (2/2) |
| Total (57) | 29.82% (17/57) | 36.84% (21/57) | 29.82% (17/57) | 28.07% (16/57) | 7.02% (4/57) | 14.04% (8/57) | 28.07% (16/57) | 17.54% (10/57) | 15.79% (9/57) | 14.04% (8/57) | 26.32% (15/57) |
Prevalence of antibiotic resistance among different sites.
| BNU (11) | 72.73% (8/11) | 72.73% (8/11) | 36.36% (4/11) | 54.55% (6/11) | 9.09% (1/11) | 27.27% (3/11) | 63.64% (7/11) | 18.18% (2/11) | 27.27% (3/11) | 36.36% (4/11) | 36.36% (4/11) | |
| Urban (16) | BP (1) | 100.00% (1/1) | 100.00% (1/1) | 100.00% (1/1) | 100.00% (1/1) | 0.00% (0/1) | 0.00% (0/1) | 100.00% (1/1) | 100.00% (1/1) | 0.00% (0/1) | 0.00% (0/1) | 100.00% (1/1) |
| THP (4) | 25.00% (1/4) | 25.00% (1/4) | 25.00% (1/4) | 25.00% (1/4) | 100.00% (0/4) | 25.00% (1/4) | 25.00% (1/4) | 0.00% (0/4) | 0.00% (0/4) | 0.00% (0/4) | 25.00% (1/4) | |
| Subtotal (16) | 62.50% (10/16) | 62.50% (10/16) | 37.50% (6/16) | 50.00% (8/16) | 6.25% (1/16) | 25.00% (4/16) | 56.25% (9/16) | 18.75% (3/16) | 18.75% (3/16) | 25.00% (4/16) | 37.50% (6/16) | |
| BWRC (4) | 50.00% (2/4) | 50.00% (2/4) | 100.00% (4/4) | 50.00% (2/4) | 0.00% (0/4) | 0.00% (0/4) | 50.00% (2/4) | 25.00% (1/4) | 25.00% (1/4) | 0.00% (0/4) | 500.00% (2/4) | |
| CP (25) | 4.00% (1/25) | 12.00% (3/25) | 4.00% (1/25) | 4.00% (1/25) | 0.00% (0/25) | 0.00% (0/25) | 4.00% (1/25) | 8.00% (2/25) | 8.00% (2/25) | 4.00% (1/25) | 4.00% (1/25) | |
| Suburb (41) | BWP (1) | 100.00% (1/1) | 100.00% (1/1) | 100.00% (1/1) | 0.00% (0/1) | 0.00% (0/1) | 100.00% (1/1) | 0.00% (0/1) | 0.00% (0/1) | 0.00% (0/1) | 0.00% (0/1) | 100.00% (1/1) |
| MP (7) | 0.00% (0/7) | 14.29% (1/7) | 28.57% (2/7) | 28.57% (2/7) | 0.00% (0/7) | 0.00% (0/7) | 14.29% (1/7) | 14.29% (1/7) | 0.00% (0/7) | 0.00% (0/7) | 28.57% (2/7) | |
| NWP (4) | 75.00% (3/4) | 75.00% (3/4) | 75.00% (3/4) | 75.00% (3/4) | 75.00% (3/4) | 75.00% (3/4) | 75.00% (3/4) | 75.00% (3/4) | 75.00% (3/4) | 75.00% (3/4) | 75.00% (3/4) | |
| Subtotal (41) | 17.07% (7/41) | 26.83% (11/41) | 26.83% (11/41) | 19.51% (8/41) | 7.32% (3/41) | 9.76% (4/41) | 17.07% (7/41) | 17.07% (7/41) | 14.63% (6/41) | 9.76% (4/41) | 21.95% (9/41) | |
| Beijing (57) | Total (57) | 29.82% (17/57) | 36.84% (21/57) | 29.82% (17/57) | 28.07% (16/57) | 7.02% (4/57) | 14.04% (8/57) | 28.07% (16/57) | 17.54% (10/57) | 15.79% (9/57) | 14.04% (8/57) | 26.32% (15/57) |
FIGURE 3The resistance spectrum of strains of Campylobacter jejuni to various antibiotic combinations. The X-axis represents the resistance rate of Campylobacter jejuni, The Y-axis represents a series of combination of antibiotics. Thirty-five (61.4%, 35/57) isolates were multi-drug resistance (resistant to more than two antibiotics respectively). AZI, azithromycin; NAL, nalidixic acid; CIP, ciprofloxacin; GEN, gentamicin; STR, streptomycin; CHL, chloramphenicol; FLO, florfenicol; TET, tetracycline; TEL, telithromycin; CLI, clindamycin; ERY, erythromycin.
Prevalence of CDT isolates from different species.
| Corvidae | Crow ( | Truncated 100% (15/15) |
| Daurian Jackdaw ( | Truncated 100% (31/31) | |
| Phasianidae | Silver Pheasant ( | Truncated 100% (1/1) |
| Anatidae | Mallard ( | WT 100% (6/6) |
| Mandarin duck ( | WT 100% (1/1) | |
| Black Swan ( | WT 100% (1/1) | |
| Columbidae | Rock Pigeon ( | WT 100% (2/2) |
Campylobacter specific primers in this study.
| CampF2 | 5′-CACGTGCTACAATGGCATAT-3′ | ||
| CampR2 | 5′-GGCTTCATGCTCTCGAGTT-3′ | ||
| Camp P2 (Probe) | |||
| LYA-F | 5′-CTTTATGCATGTTCTTCTAAATTT-3′ | ||
| MII-R: | 5′-GTTAAAGGTGGGGTTATAATCATT-3′ (25) | ||
| lpxA | 5′AGA CAA ATA AGA GAG AAT CAG-3′ | ||
| lpxA | 5′ACA ACT TGG TGA CGA TGT TGT A-3′ | ||
| lpxA | 5′TRC CAA ATG TTA AAA TAG GCG A-3′ | ||
| lpxA | 5′AAG TCG TAT ATT TTC YTA CGC TTG TGTG-3′ | ||
| lpxAARKK2M | 5′CAATCATGDGCDATATGASAATAHGCCAT-3′ | ||
| flaA-F | 5′-GGATTTCGTATTAACACAAATGGTGC-3 | ||
| flaA-R | 5′-CTGTAGTAATCTTAAAACATTTTG-3 | ||
| cadFU | 5′-TTGAAGGTAATTTAGATATG-3′ | ||
| cadFR | 5′-CTAATACCTAAAGTTGAAAC-3′ |
Oligonucleotide primers for Campylobacter MLST.
| asp | Amplification | asp-A9, 5′-AGT ACT AAT GAT GCT TAT CC-3′ | asp-A10, 5′-ATT TCA TCA ATT TGT TCT TTG C-3′ | 899 |
| Sequencing | asp-S3, 5′-CCA ACT GCA AGA TGC TGT ACC-3′ | asp-S6, 5′- TTC ATT TGC GGT AAT ACC ATC-3′ | ||
| gln | Amplification | gln-A1, 5′-TAG GAA CTT GGC ATC ATA TTA CC-3′ | gln-A2, 5′-TTG GAC GAG CTT CTA CTG GC-3′ | 1262 |
| Sequencing | gln-S1, 5′- GCT CAA TTC ATG GAT GGC-3′ | gln-S4, 5′- GCA TAC CAT TGC CAT TAT CTC CG-3′ | ||
| glt | Amplification | glt-A1, 5′-GGG CTT GAC TTC TAC AGC TAC TTG-3′ | glt-A2, 5′-CCA AAT AAA GTT GTC TTG GAC GG-3′ | 1012 |
| Sequencing | glt-S3, 5′-CTT ATA TTG ATG GAG AAA ATG G-3′ | glt-S8, 5′- TGC TAT ACA GGC ATA AGG ATG-3′ | ||
| gly | Amplification | gly-A1, 5′-GAG TTA GAG CGT CAA TGT GAA GG-3′ | gly-A2, 5′-AAA CCT CTG GCA GTA AGG GC-3′ | 816 |
| Sequencing | gly-S5, 5′- GCT AAT CAA GGT GTT TAT AT-3′ | gly-S4, 5′-AGG TGA TTA TCC GTT CCA TCG C-3′ | ||
| pgm | Amplification | pgm-A7, 5′-TAC TAA TAA TAT CTT AGT AGG-3′ | pgm-A8, 5′-CAC AAC ATT TTT CAT TTC TTT TTC-3′ | 1150 |
| Sequencing | pgm-S5, 5′- GGT TTT AGA TGT GGC TCA TG-3′ | pgm-S2, 5′- TCC AGA ATA GCG AAA TAA GG-3′ | ||
| tkt | Amplification | tkt-A3, 5′-GCA AAC TCA GGA CAC CCA GG-3′ | tkt-A6, 5′-AAA GCA TTG TTA ATG GCT GC-3′ | 1102 |
| Sequencing | tkt-S5, 5′- GCT TAG ACG ATA TTT TAA GTG-3′ | tkt-S6, 5′- AAG CCT GCT TGT TCT TTG GC-3′ | ||
| unc | Amplification | unc-A7, 5′-ATG GAC TTA AGA ATA TTA TGG C-3′ | unc-A8, 5′-ATA AAT TCC ATC TTC AAA TTC C-3′ | 1120 |
| Sequencing | unc-S3, 5′- AAA GTA CAG TGG CAC AAG TGG-3′ | unc-S4, 5′- TGC CTC ATC TAA ATC ACT AGC-3′ | ||
Campylobacter specific primers in this study.
| F1-campy-23S | 5′-AAGAGGATGTATAG GGTGTGACG-3′ | ||
| R1-campy-23S | 5′-AACGATTTCC AACCGTTCTG-3′ | ||
| DMT 1 | 5′-GGCGTTTTGTTT ATGTGCG-3′ | ||
| DMT 2 | 5′-GTTAAAGGTGGGGTTAT AATCATT-3′ | ||
| CampyMAMAgyrA1 | 5′-TTTTTAGCAA AGATTCTGAT-3′ | ||
| GZgyrA4 | 5′-CAGTATAACGCATC GCAGCG-3′ | ||
| CampyMAMAgyrA5 | 5′-CAAAGCATCA TAAACTGCAA-3′ | ||
| AphA-3 F | 5′-GGGACCACCTATGATG TGGAACG-3′ | ||
| AphA-3 R | 5′-CAGGCTTGATCC CCAGTAAGTC-3′ |