Literature DB >> 31736545

QTLs position of some important ornamental traits in recently developed OO lily population.

Younes Pourbeyrami Hir1,2, SuXia Yuan2, Mousa Torabi Giglou1, Ming Jun2.   

Abstract

Lilium L. is a perennial ornamental bulbous species, belonging to Liliaceae family, which consists of about 100 species. One of the most important hybrids in Lilium L. is the Oriental hybrid lily. Different cross combinations have been done in the lily family such as AA (Asiatic × Asiatic), AL (Asiatic × Longiflorum), and OT (Oriental × Trumpet). The OO (Oriental × Oriental) combination is a new one. SSR and AFLP markers were used to overlap each other and the genetic linkage groups were created according to the haploid number of lily chromosomes (12 linkage groups). In this experiment, the final F1 population, which creates a genetic linkage group, was 100 individuals. For map construction, JOINMAP 4.0 software by treating segregation data of markers as a CP (out breeder full-sib family) model was used. After evaluation of ornamental traits, MapQTL 4.0 software was also used to find possible QTLs on these linkage maps. A total of 940 primers were tested and the best ones, which were 172 primer pairs (96 AFLP and 76 SSR markers), were used for map construction and the total of 616 loci (465 loci for AFLP marker and 151 loci for SSR marker) were scored. The entire mapped length was 2144.2 cM. 8 QTLs were obtained for flower number which is an important trait in lily. Each QTL locus explained the phenotypic variation of 2.4-89.5%. The highest amount of LOD (35.21) was found in LG-F1P2 for FN4 QTL. For leaf number, one-QTL was mapped with LOD of 7.08 between 2 markers on the LG-M10 of maternal maps. The QTL for petal length was placed on the LG-F1P2 of the F1 hybrid maps on the E-CGC/M-CGC-4 primer combination. The petal width QTLs also were mapped on the E-CGC/M-CGC-4. Qualitative locus named LN was mapped on the LG-M10 of the maternal maps. PW2 QTL was also localized on the LG-F4 of the paternal maps. In this experiment, 5 QTLs also were mapped for spot number in all F1 hybrids and paternal and maternal maps, and spot size. Moreover, one QTL with the length of 51 cM was measured on the LG-M8 of the maternal maps. Plant height QTL with the LOD of 12.54 was mapped on the primer combination of E-CGC/M-CGC-4 on the LG-F1P2 of the F1 hybrid maps. © Prof. H.S. Srivastava Foundation for Science and Society 2019.

Keywords:  Chromosomes; Linkage map; Loci; QTL; Spot

Year:  2019        PMID: 31736545      PMCID: PMC6825088          DOI: 10.1007/s12298-019-00688-y

Source DB:  PubMed          Journal:  Physiol Mol Biol Plants        ISSN: 0974-0430


  21 in total

1.  Mapping of qualitative and quantitative phenotypic traits in Rosa using AFLP markers.

Authors:  L. Crespel; M. Chirollet; E. Durel; D. Zhang; J. Meynet; S. Gudin
Journal:  Theor Appl Genet       Date:  2002-10-11       Impact factor: 5.699

2.  A genome-wide association study of plant height and primary branch number in rapeseed (Brassica napus).

Authors:  Feng Li; Biyun Chen; Kun Xu; Guizhen Gao; Guixin Yan; Jiangwei Qiao; Jun Li; Hao Li; Lixia Li; Xin Xiao; Tianyao Zhang; Takeshi Nishio; Xiaoming Wu
Journal:  Plant Sci       Date:  2015-05-23       Impact factor: 4.729

3.  Genetic architecture of flowering time in maize as inferred from quantitative trait loci meta-analysis and synteny conservation with the rice genome.

Authors:  Fabien Chardon; Bérangère Virlon; Laurence Moreau; Matthieu Falque; Johann Joets; Laurent Decousset; Alain Murigneux; Alain Charcosset
Journal:  Genetics       Date:  2004-12       Impact factor: 4.562

4.  Genetics of flower size and nectar volume in Petunia pollination syndromes.

Authors:  Céline Galliot; Maria Elena Hoballah; Cris Kuhlemeier; Jeroen Stuurman
Journal:  Planta       Date:  2006-07-27       Impact factor: 4.116

5.  AFLP: a new technique for DNA fingerprinting.

Authors:  P Vos; R Hogers; M Bleeker; M Reijans; T van de Lee; M Hornes; A Frijters; J Pot; J Peleman; M Kuiper
Journal:  Nucleic Acids Res       Date:  1995-11-11       Impact factor: 16.971

6.  QTL mapping of naturally-occurring variation in flowering time of Arabidopsis thaliana.

Authors:  S P Kowalski; T H Lan; K A Feldmann; A H Paterson
Journal:  Mol Gen Genet       Date:  1994-12-01

7.  Mapping QTLs with epistatic effects and QTL x environment interactions for plant height using a doubled haploid population in cultivated wheat.

Authors:  Kunpu Zhang; Jichun Tian; Liang Zhao; Shanshan Wang
Journal:  J Genet Genomics       Date:  2008-02       Impact factor: 4.275

8.  QTL analysis of horticultural traits differentiating the cultivated tomato from the closely related species Lycopersicon pimpinellifolium.

Authors:  S Grandillo; S D Tanksley
Journal:  Theor Appl Genet       Date:  1996-06       Impact factor: 5.699

9.  An 11-bp insertion in Zea mays fatb reduces the palmitic acid content of fatty acids in maize grain.

Authors:  Lin Li; Hui Li; Qing Li; Xiaohong Yang; Debo Zheng; Marilyn Warburton; Yuchao Chai; Pan Zhang; Yuqiu Guo; Jianbing Yan; Jiansheng Li
Journal:  PLoS One       Date:  2011-09-13       Impact factor: 3.240

10.  Construction of the first genetic linkage map of Japanese gentian (Gentianaceae).

Authors:  Takashi Nakatsuka; Eri Yamada; Misa Saito; Takashi Hikage; Yuka Ushiku; Masahiro Nishihara
Journal:  BMC Genomics       Date:  2012-11-28       Impact factor: 3.969

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