Literature DB >> 31730696

Correction to: Transcriptome of the caribbean stony coral Porites astreoides from three developmental stages.

Tamer A Mansour1,2, Joshua J C Rosenthal3,4, C Titus Brown1, Loretta M Roberson3,5.   

Abstract

Entities:  

Year:  2019        PMID: 31730696      PMCID: PMC6857687          DOI: 10.1093/gigascience/giz048

Source DB:  PubMed          Journal:  Gigascience        ISSN: 2047-217X            Impact factor:   6.524


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This is a correction to: GigaScience, Volume 5, Issue 1, 1 December 2016, s13742-016-0138-1, https://doi.org/10.1186/s13742-016-0138-1 In the original version of the article “Transcriptome of the Caribbean stony coral Porites astreoides from three developmental stages” by Tamer A. Mansour et al. [1] there were a number of unfortunate errors in the text caused due to problems with citation management software. In the paragraph titled “Transcriptome preprocessing, assembly and annotation”, the order of references 7, 25, 26, 27, 36 are incorrect, and the Trinity version is also wrong. Furthermore, reference 14 [2] was misspelled, five references were missed (22 [3], 25 [4], 26 [5], 27 [6] and 36 [7]) and subsequently incorrectly ordered (references 37 [8], 38 [9] and 39 [10]). The references and the Trinity version have been corrected, and the authors apologize for the error.
  7 in total

1.  Metagenomic analysis of stressed coral holobionts.

Authors:  Rebecca Vega Thurber; Dana Willner-Hall; Beltran Rodriguez-Mueller; Christelle Desnues; Robert A Edwards; Florent Angly; Elizabeth Dinsdale; Linda Kelly; Forest Rohwer
Journal:  Environ Microbiol       Date:  2009-04-22       Impact factor: 5.491

2.  TransRate: reference-free quality assessment of de novo transcriptome assemblies.

Authors:  Richard Smith-Unna; Chris Boursnell; Rob Patro; Julian M Hibberd; Steven Kelly
Journal:  Genome Res       Date:  2016-06-01       Impact factor: 9.043

3.  Transcriptome of the Caribbean stony coral Porites astreoides from three developmental stages.

Authors:  Tamer A Mansour; Joshua J C Rosenthal; C Titus Brown; Loretta M Roberson
Journal:  Gigascience       Date:  2016-08-02       Impact factor: 6.524

4.  Full-length transcriptome assembly from RNA-Seq data without a reference genome.

Authors:  Manfred G Grabherr; Brian J Haas; Moran Yassour; Joshua Z Levin; Dawn A Thompson; Ido Amit; Xian Adiconis; Lin Fan; Raktima Raychowdhury; Qiandong Zeng; Zehua Chen; Evan Mauceli; Nir Hacohen; Andreas Gnirke; Nicholas Rhind; Federica di Palma; Bruce W Birren; Chad Nusbaum; Kerstin Lindblad-Toh; Nir Friedman; Aviv Regev
Journal:  Nat Biotechnol       Date:  2011-05-15       Impact factor: 54.908

5.  An optimized procedure greatly improves EST vector contamination removal.

Authors:  Yi-An Chen; Chang-Chun Lin; Chin-Di Wang; Huan-Bin Wu; Pei-Ing Hwang
Journal:  BMC Genomics       Date:  2007-11-13       Impact factor: 3.969

6.  RNAseq versus genome-predicted transcriptomes: a large population of novel transcripts identified in an Illumina-454 Hydra transcriptome.

Authors:  Yvan Wenger; Brigitte Galliot
Journal:  BMC Genomics       Date:  2013-03-25       Impact factor: 3.969

7.  Trimmomatic: a flexible trimmer for Illumina sequence data.

Authors:  Anthony M Bolger; Marc Lohse; Bjoern Usadel
Journal:  Bioinformatics       Date:  2014-04-01       Impact factor: 6.937

  7 in total

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