Literature DB >> 31729573

A new species of Clinostomum Leidy, 1856 in East Asia based on genomic and morphological data.

Sean A Locke1, Monica Caffara2, Daniel Barčák3, Pasaikou Sonko4,5, Perla Tedesco2, Maria L Fioravanti2, Wenxiang Li6.   

Abstract

Metacercariae of Clinostomum Leidy, 1856 are frequently encountered in freshwater fish. In 2015, a provisional species of Clinostomum in People's Republic of China (PRC) was distinguished from C. complanatum (Rudolphi, 1819) in Europe based on divergent cytochrome c oxidase I (CO1). However, in subsequent studies in East Asia, the same divergent CO1 genotype was identified as C. complanatum. These matching sequences suggest that either the provisional East Asian species was incorrectly distinguished from C. complanatum in 2015 or that C. complanatum in East Asia was misidentified in later studies. We tested these alternatives by sequencing the mitochondrial genome of C. complanatum in Italy, which was 5.7% divergent from a previously published sequence from Clinostomum in PRC, including differences in 80 of 3390 (2.4%) translated amino acids. Partial CO1 sequences of specimens from PRC and those from Italy, Romania, and Turkey also each formed reciprocally monophyletic clades. Partial CO1 from the East Asian clade varied by mean 3.6% (range 2.4-4.8%) from C. complanatum from Italy, Romania, and Turkey; mean intra-clade CO1 variation was 0.3% (range 0-1.9%). Metacercariae from Europe and East Asia display significant morphometric variation, and data from the literature suggest morphological differences in the genital complex of adults. Although sequences of nuclear rDNA did not differ between isolates from the west and East Asia, taken together, these results lead us to describe a new species of Clinostomum.

Entities:  

Keywords:  DNA barcode; Fish parasite; Halzoun; Helminth; Molecular prospecting; Species identification; Yellow grub

Mesh:

Substances:

Year:  2019        PMID: 31729573     DOI: 10.1007/s00436-019-06536-y

Source DB:  PubMed          Journal:  Parasitol Res        ISSN: 0932-0113            Impact factor:   2.289


  27 in total

1.  Clinostomum poteae n. sp. (Digenea: Clinostomidae), in the trachea of a double-crested cormorant Phalacrocorax auritus Lesson, 1831 and molecular data linking the life-cycle stages of Clinostomum album Rosser, Alberson, Woodyard, Cunningham, Pote & Griffin, 2017 in Mississippi, USA.

Authors:  Thomas G Rosser; Wes A Baumgartner; Neely R Alberson; Travis W Noto; Ethan T Woodyard; D Tommy King; David J Wise; Matt J Griffin
Journal:  Syst Parasitol       Date:  2018-05-31       Impact factor: 1.431

2.  Development of primers for the mitochondrial cytochrome c oxidase I gene in digenetic trematodes (Platyhelminthes) illustrates the challenge of barcoding parasitic helminths.

Authors:  Anna Moszczynska; Sean A Locke; J Daniel McLaughlin; David J Marcogliese; Teresa J Crease
Journal:  Mol Ecol Resour       Date:  2009-05       Impact factor: 7.090

3.  Morphological and molecular differentiation of Clinostomum complanatum and Clinostomum marginatum (Digenea: Clinostomidae) metacercariae and adults.

Authors:  Monica Caffara; Sean A Locke; Andrea Gustinelli; David J Marcogliese; Maria L Fioravanti
Journal:  J Parasitol       Date:  2011-06-28       Impact factor: 1.276

4.  On the life history, growth and development from the metacercarial stage to adulthood, of Clinostomum tilapiae Ukoli, 1966.

Authors:  F M Ukoli
Journal:  J Helminthol       Date:  1966       Impact factor: 2.170

5.  Complete mitochondrial genome phylogeographic analysis of killer whales (Orcinus orca) indicates multiple species.

Authors:  Phillip A Morin; Frederick I Archer; Andrew D Foote; Julia Vilstrup; Eric E Allen; Paul Wade; John Durban; Kim Parsons; Robert Pitman; Lewyn Li; Pascal Bouffard; Sandra C Abel Nielsen; Morten Rasmussen; Eske Willerslev; M Thomas P Gilbert; Timothy Harkins
Journal:  Genome Res       Date:  2010-04-22       Impact factor: 9.043

6.  Mitochondrial genome of Ogmocotyle sikae and implications for phylogenetic studies of the Notocotylidae trematodes.

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Journal:  Infect Genet Evol       Date:  2015-11-25       Impact factor: 3.342

7.  MITOS: improved de novo metazoan mitochondrial genome annotation.

Authors:  Matthias Bernt; Alexander Donath; Frank Jühling; Fabian Externbrink; Catherine Florentz; Guido Fritzsch; Joern Pütz; Martin Middendorf; Peter F Stadler
Journal:  Mol Phylogenet Evol       Date:  2012-09-07       Impact factor: 4.286

8.  Validity of the Diplostomoidea and Diplostomida (Digenea, Platyhelminthes) upheld in phylogenomic analysis.

Authors:  Sean A Locke; Alex Van Dam; Monica Caffara; Hudson Alves Pinto; Danimar López-Hernández; Christopher A Blanar
Journal:  Int J Parasitol       Date:  2018-10-19       Impact factor: 3.981

9.  Complete mitochondrial genomes of the 'intermediate form' of Fasciola and Fasciola gigantica, and their comparison with F. hepatica.

Authors:  Guo-Hua Liu; Robin B Gasser; Neil D Young; Hui-Qun Song; Lin Ai; Xing-Quan Zhu
Journal:  Parasit Vectors       Date:  2014-03-31       Impact factor: 3.876

10.  RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies.

Authors:  Alexandros Stamatakis
Journal:  Bioinformatics       Date:  2014-01-21       Impact factor: 6.937

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  2 in total

1.  Molecular data reveal hidden diversity of the genus Clinostomum (Digenea, Clinostomidae) in Argentina, with the description of a new species from Ardea cocoi (Ardeidae).

Authors:  Martin Miguel Montes; Jorge Barneche; Luis Pagano; Walter Ferrari; Sergio Roberto Martorelli; Gerardo Pérez-Ponce de León
Journal:  Parasitol Res       Date:  2021-07-07       Impact factor: 2.289

Review 2.  Size does not matter: molecular phylogeny reveals one of the largest trematodes from vertebrates, the enigmatic Ithyoclinostomum dimorphum, as a species of Clinostomum (Trematoda: Clinostomidae).

Authors:  Mariana B Simões; Philippe V Alves; Danimar López-Hernández; Elimayke A Couto; Narcisa I B Moreira; Hudson A Pinto
Journal:  Int J Parasitol Parasites Wildl       Date:  2022-08-24       Impact factor: 2.773

  2 in total

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