Literature DB >> 31729013

Discovering structure in multiple outcomes models for tests of childhood neurodevelopment.

Amy LaLonde1, Tanzy Love1, Sally W Thurston2, Philip W Davidson3.   

Abstract

Bayesian model-based clustering provides a powerful and flexible tool that can be incorporated into regression models to better understand the grouping of observations. Using data from the Seychelles Child Development Study, we explore the effect of prenatal methylmercury exposure on 20 neurodevelopmental outcomes measured in 9-year-old children. Rather than cluster individual subjects, we cluster the outcomes within a multiple outcomes model. By using information in the data to nest the outcomes into groups called domains, the model more accurately reflects the shared characteristics of neurodevelopmental domains and improves estimation of the overall and outcome-specific exposure effects by shrinking effects within and between domains selected by the data. The Bayesian paradigm allows for sampling from the posterior distribution of the grouping parameters; thus, inference can be made about group membership and their defining characteristics. We avoid the often difficult and highly subjective requirement of a priori identification of the total number of groups by incorporating a Dirichlet process prior to form a fully Bayesian multiple outcomes model.
© 2019 The International Biometric Society.

Entities:  

Keywords:  Dirichlet process prior; Markov chain Monte Carlo (MCMC) sampling; mixed models; random effects; split-merge sampling

Year:  2019        PMID: 31729013      PMCID: PMC7225082          DOI: 10.1111/biom.13174

Source DB:  PubMed          Journal:  Biometrics        ISSN: 0006-341X            Impact factor:   2.571


  9 in total

1.  Multivariate linear mixed models for multiple outcomes.

Authors:  M Sammel; X Lin; L Ryan
Journal:  Stat Med       Date:  1999 Sep 15-30       Impact factor: 2.373

2.  Scaled marginal models for multiple continuous outcomes.

Authors:  Jason Roy; Xihong Lin; Louise M Ryan
Journal:  Biostatistics       Date:  2003-07       Impact factor: 5.899

3.  Bayesian infinite mixture model based clustering of gene expression profiles.

Authors:  Mario Medvedovic; Siva Sivaganesan
Journal:  Bioinformatics       Date:  2002-09       Impact factor: 6.937

4.  Monitoring methylmercury during pregnancy: maternal hair predicts fetal brain exposure.

Authors:  E Cernichiari; R Brewer; G J Myers; D O Marsh; L W Lapham; C Cox; C F Shamlaye; M Berlin; P W Davidson; T W Clarkson
Journal:  Neurotoxicology       Date:  1995       Impact factor: 4.294

5.  Bayesian models for multiple outcomes nested in domains.

Authors:  Sally W Thurston; David Ruppert; Philip W Davidson
Journal:  Biometrics       Date:  2009-12       Impact factor: 2.571

6.  Prenatal methylmercury exposure from ocean fish consumption in the Seychelles child development study.

Authors:  Gary J Myers; Philip W Davidson; Christopher Cox; Conrad F Shamlaye; Donna Palumbo; Elsa Cernichiari; Jean Sloane-Reeves; Gregory E Wilding; James Kost; Li-Shan Huang; Thomas W Clarkson
Journal:  Lancet       Date:  2003-05-17       Impact factor: 79.321

7.  Bayesian Models for Multiple Outcomes in Domains with Application to the Seychelles Child Development Study.

Authors:  Luo Xiao; Sally W Thurston; David Ruppert; Tanzy M T Love; Philip W Davidson
Journal:  J Am Stat Assoc       Date:  2014-01-01       Impact factor: 5.033

8.  Latent factor regression models for grouped outcomes.

Authors:  D B Woodard; T M T Love; S W Thurston; D Ruppert; S Sathyanarayana; S H Swan
Journal:  Biometrics       Date:  2013-07-11       Impact factor: 2.571

9.  Estimation of health effects of prenatal methylmercury exposure using structural equation models.

Authors:  Esben Budtz-Jørgensen; Niels Keiding; Philippe Grandjean; Pal Weihe
Journal:  Environ Health       Date:  2002-10-14       Impact factor: 5.984

  9 in total

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