Literature DB >> 31728656

A mini review of xylanolytic enzymes with regards to their synergistic interactions during hetero-xylan degradation.

Samkelo Malgas1, Mpho S Mafa1,2, Lithalethu Mkabayi1, Brett I Pletschke3.   

Abstract

This review examines the recent models describing the mode of action of various xylanolytic enzymes and how these enzymes can be applied (sequentially or simultaneously) with their distinctive roles in mind to achieve efficient xylan degradation. With respect to homeosynergy, synergism appears to be as a result of β-xylanase and/or oligosaccharide reducing-end β-xylanase liberating xylo-oligomers (XOS) that are preferred substrates of the processive β-xylosidase. With regards to hetero-synergism, two cross relationships appear to exist and seem to be the reason for synergism between the enzymes during xylan degradation. These cross relations are the debranching enzymes such as α-glucuronidase or side-chain cleaving enzymes such as carbohydrate esterases (CE) removing decorations that would have hindered back-bone-cleaving enzymes, while backbone-cleaving-enzymes liberate XOS that are preferred substrates of the debranching and side-chain-cleaving enzymes. This interaction is demonstrated by high yields in co-production of xylan substituents such as arabinose, glucuronic acid and ferulic acid, and XOS. Finally, lytic polysaccharide monooxygenases (LPMO) have also been implicated in boosting whole lignocellulosic biomass or insoluble xylan degradation by glycoside hydrolases (GH) by possibly disrupting entangled xylan residues. Since it has been observed that the same enzyme (same Enzyme Commission, EC, classification) from different GH or CE and/or AA families can display different synergistic interactions with other enzymes due to different substrate specificities and properties, in this review, we propose an approach of enzyme selection (and mode of application thereof) during xylan degradation, as this can improve the economic viability of the degradation of xylan for producing precursors of value added products.

Entities:  

Keywords:  Carbohydrate esterases; Degradation; Glycoside hydrolases; Lytic polysaccharide monooxygenase; Synergy; Xylan

Year:  2019        PMID: 31728656     DOI: 10.1007/s11274-019-2765-z

Source DB:  PubMed          Journal:  World J Microbiol Biotechnol        ISSN: 0959-3993            Impact factor:   3.312


  85 in total

1.  Synergistic effect and application of xylanases as accessory enzymes to enhance the hydrolysis of pretreated bagasse.

Authors:  Geisa A L Gonçalves; Yusaku Takasugi; Lili Jia; Yutaro Mori; Shuhei Noda; Tsutomu Tanaka; Hirofumi Ichinose; Noriho Kamiya
Journal:  Enzyme Microb Technol       Date:  2015-01-25       Impact factor: 3.493

Review 2.  Towards enzymatic breakdown of complex plant xylan structures: State of the art.

Authors:  Peter Biely; Suren Singh; Vladimír Puchart
Journal:  Biotechnol Adv       Date:  2016-09-09       Impact factor: 14.227

3.  GH115 α-glucuronidase and GH11 xylanase from Paenibacillus sp. JDR-2: potential roles in processing glucuronoxylans.

Authors:  Mun Su Rhee; Neha Sawhney; Young Sik Kim; Hyun Jee Rhee; Jason C Hurlbert; Franz J St John; Guang Nong; John D Rice; James F Preston
Journal:  Appl Microbiol Biotechnol       Date:  2016-10-21       Impact factor: 4.813

Review 4.  Hemicelluloses.

Authors:  Henrik Vibe Scheller; Peter Ulvskov
Journal:  Annu Rev Plant Biol       Date:  2010       Impact factor: 26.379

5.  Characterization of a recombinant α-glucuronidase from Aspergillus fumigatus.

Authors:  Lorena Rosa; María Cristina Ravanal; Wladimir Mardones; Jaime Eyzaguirre
Journal:  Fungal Biol       Date:  2013-04-17

6.  Distinct actions by Paenibacillus sp. strain E18 α-L-arabinofuranosidases and xylanase in xylan degradation.

Authors:  Pengjun Shi; Xiaoyan Chen; Kun Meng; Huoqing Huang; Yingguo Bai; Huiying Luo; Peilong Yang; Bin Yao
Journal:  Appl Environ Microbiol       Date:  2013-01-18       Impact factor: 4.792

7.  alpha-L-Arabinofuranosidase from Streptomyces sp. PC22: purification, characterization and its synergistic action with xylanolytic enzymes in the degradation of xylan and agricultural residues.

Authors:  P Raweesri; P Riangrungrojana; P Pinphanichakarn
Journal:  Bioresour Technol       Date:  2008-07-07       Impact factor: 9.642

8.  The Glycoside Hydrolase Family 8 Reducing-End Xylose-Releasing Exo-oligoxylanase Rex8A from Paenibacillus barcinonensis BP-23 Is Active on Branched Xylooligosaccharides.

Authors:  Susana V Valenzuela; Sergi Lopez; Peter Biely; Julia Sanz-Aparicio; F I Javier Pastor
Journal:  Appl Environ Microbiol       Date:  2016-08-15       Impact factor: 4.792

9.  Purification and properties of an acetylxylan esterase from Thermobifida fusca.

Authors:  Chao-Hsun Yang; Wen-Hsiung Liu
Journal:  Enzyme Microb Technol       Date:  2007-09-15       Impact factor: 3.493

10.  Discovery of the combined oxidative cleavage of plant xylan and cellulose by a new fungal polysaccharide monooxygenase.

Authors:  Matthias Frommhagen; Stefano Sforza; Adrie H Westphal; Jaap Visser; Sandra W A Hinz; Martijn J Koetsier; Willem J H van Berkel; Harry Gruppen; Mirjam A Kabel
Journal:  Biotechnol Biofuels       Date:  2015-07-17       Impact factor: 6.040

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  16 in total

1.  High-Throughput Generation of Product Profiles for Arabinoxylan-Active Enzymes from Metagenomes.

Authors:  Maria João Maurício da Fonseca; Zachary Armstrong; Stephen G Withers; Yves Briers
Journal:  Appl Environ Microbiol       Date:  2020-11-10       Impact factor: 4.792

2.  Metagenome-assembled genome of a Chitinophaga sp. and its potential in plant biomass degradation, as well of affiliated Pandoraea and Labrys species.

Authors:  Michelli Inácio Gonçalves Funnicelli; Daniel Guariz Pinheiro; Elisângela Soares Gomes-Pepe; Lucas Amoroso Lopes de Carvalho; João Carlos Campanharo; Camila Cesário Fernandes; Luciano Takeshi Kishi; Lúcia Maria Carareto Alves; Eliana Gertrudes de Macedo Lemos
Journal:  World J Microbiol Biotechnol       Date:  2021-08-27       Impact factor: 3.312

Review 3.  Cellulolytic and Xylanolytic Enzymes from Yeasts: Properties and Industrial Applications.

Authors:  Muhammad Sohail; Noora Barzkar; Philippe Michaud; Saeid Tamadoni Jahromi; Olga Babich; Stanislav Sukhikh; Rakesh Das; Reza Nahavandi
Journal:  Molecules       Date:  2022-06-12       Impact factor: 4.927

4.  Identification and Characterization of a Novel, Cold-Adapted d-Xylobiose- and d-Xylose-Releasing Endo-β-1,4-xylanase from an Antarctic Soil Bacterium, Duganella sp. PAMC 27433.

Authors:  Do Young Kim; Jonghoon Kim; Yung Mi Lee; Jong Suk Lee; Dong-Ha Shin; Bon-Hwan Ku; Kwang-Hee Son; Ho-Yong Park
Journal:  Biomolecules       Date:  2021-04-30

5.  Electrostatic interaction optimization improves catalytic rates and thermotolerance on xylanases.

Authors:  Vinícius de Godoi Contessoto; Felipe Cardoso Ramos; Ricardo Rodrigues de Melo; Vinícius Martins de Oliveira; Josiane Aniele Scarpassa; Amanda Silva de Sousa; Letıcia Maria Zanphorlin; Gabriel Gouvea Slade; Vitor Barbanti Pereira Leite; Roberto Ruller
Journal:  Biophys J       Date:  2021-04-05       Impact factor: 3.699

6.  Fusion of a proline-rich oligopeptide to the C-terminus of a ruminal xylanase improves catalytic efficiency.

Authors:  Ruyue Dong; Xiaoqing Liu; Yaru Wang; Xing Qin; Xiaolu Wang; Honglian Zhang; Yuan Wang; Huiying Luo; Bin Yao; Yingguo Bai; Tao Tu
Journal:  Bioengineered       Date:  2022-04       Impact factor: 6.832

7.  Conversion of Wheat Bran to Xylanases and Dye Adsorbent by Streptomyces thermocarboxydus.

Authors:  Thi Ngoc Tran; Chien Thang Doan; San-Lang Wang
Journal:  Polymers (Basel)       Date:  2021-01-17       Impact factor: 4.329

8.  Novel xylan-degrading enzymes from polysaccharide utilizing loci of Prevotella copri DSM18205.

Authors:  Javier A Linares-Pastén; Johan Sebastian Hero; José Horacio Pisa; Cristina Teixeira; Margareta Nyman; Patrick Adlercreutz; M Alejandra Martinez; Eva Nordberg Karlsson
Journal:  Glycobiology       Date:  2021-11-18       Impact factor: 4.313

9.  Characterization of glycoside hydrolase family 11 xylanase from Streptomyces sp. strain J103; its synergetic effect with acetyl xylan esterase and enhancement of enzymatic hydrolysis of lignocellulosic biomass.

Authors:  Svini Dileepa Marasinghe; Eunyoung Jo; Sachithra Amarin Hettiarachchi; Youngdeuk Lee; Tae-Yang Eom; Yehui Gang; Yoon-Hyeok Kang; Chulhong Oh
Journal:  Microb Cell Fact       Date:  2021-07-08       Impact factor: 5.328

Review 10.  Enzymatic processing of lignocellulosic biomass: principles, recent advances and perspectives.

Authors:  Heidi Østby; Line Degn Hansen; Svein J Horn; Vincent G H Eijsink; Anikó Várnai
Journal:  J Ind Microbiol Biotechnol       Date:  2020-08-25       Impact factor: 3.346

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