| Literature DB >> 31727932 |
Emma K Harris1, Marisa R Harton2, Maria Angela de Mello Marques2, John T Belisle2, Claudia R Molins1, Nicole Breuner1, Gary P Wormser3, Robert D Gilmore4.
Abstract
The tick-borne spirochete, Borrelia miyamotoi, is an emerging pathogen of public health significance. Current B. miyamotoi serodiagnostic testing depends on reactivity against GlpQ which is not highly sensitive on acute phase serum samples. Additionally, anti-B. miyamotoi antibodies can cross-react with C6 antigen testing for B. burgdorferi, the causative agent of Lyme disease, underscoring the need for improved serological assays that produce accurate diagnostic results. We performed an immunoproteomics analysis of B. miyamotoi proteins to identify novel serodiagnostic antigens. Sera from mice infected with B. miyamotoi by subcutaneous inoculation or tick bite were collected for immunoblotting against B. miyamotoi membrane-associated proteins separated by 2-dimensional electrophoresis (2DE). In total, 88 proteins in 40 2DE immunoreactive spots were identified via mass spectrometry. Multiple variable large proteins (Vlps) and a putative lipoprotein were among those identified and analyzed. Reactivity of anti-B. miyamotoi sera against recombinant Vlps and the putative lipoprotein confirmed their immunogenicity. Mouse anti-B. burgdorferi serum was cross-reactive to all recombinant Vlps, but not against the putative lipoprotein by IgG. Furthermore, antibodies against the recombinant putative lipoprotein were present in serum from a B. miyamotoi-infected human patient, but not a Lyme disease patient. Results presented here provide a comprehensive profile of B. miyamotoi antigens that induce the host immune response and identify a putative lipoprotein as a potentially specific antigen for B. miyamotoi serodetection.Entities:
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Year: 2019 PMID: 31727932 PMCID: PMC6856195 DOI: 10.1038/s41598-019-53248-5
Source DB: PubMed Journal: Sci Rep ISSN: 2045-2322 Impact factor: 4.379
Figure 1Silver stain representation of B. miyamotoi LB-2001 membrane-associated proteins. A defined spot profile was established by using approximately 100 µg of protein applied to IPG strips for IEF across pH 4–7 and 6–11. Second dimension 4–12% SDS-PAGE separated proteins by molecular weight (denoted by kDa on left of panels). Immunoreactive protein spots against antibodies present in B. miyamotoi-infected murine hosts are circled and numbered with corresponding identities listed in Table 1 and Supplemental Table 1. Dashed lines demarcate where the gel has been cropped to exclude molecular weight markers. Uncropped gel images can be viewed in Supplemental Fig. 2.
Protein identities corresponding to immunoreactive spots.
| GO terma | Spot no. | Protein ID | pIb | NCBI accession ID | Pred MW in kDac | No. of unique peptides |
|---|---|---|---|---|---|---|
| 1, 3, 10, 11, 22, 31, 32, 39, 40 | VlpC2g | 5.84 | ALU64348.1 | 35 | 26, 5, 28, 24, 14, 5, 9, 4, 4 | |
| 2 | Vlp5g | 5.73 | AOW96300.1 | 35 | 2 | |
| 2, 4, 5, 6, 7, 22, 33 | VlpD2g | 5.55 | ALM31567.1 | 34* | 3, 5, 9, 14, 5, 12, 4 | |
| 4, 5, 6, 7, 9, 22, 33 | VlpD8g | 5.43 | ALU64349.1 | 33* | 29, 32, 22, 7, 5, 16, 7 | |
| 4, 5, 6, 7, 9, 10, 22 | VlpD9g | 5.96 | ALU64350.1 | 34* | 2, 3, 5, 9, 18, 2, 2 | |
| 4, 5, 6, 7, 22 | Vlp15/16g | 5.61 | AOW96282.1 | 33* | 5, 7, 7, 5, 3 | |
| 4, 5, 6, 22 | VlpD1g | 5.62 | ALM31565.1 | 34 | 4, 8, 11, 8 | |
| 5, 6, 7, 9, 22 | VlpD10g | 5.77 | ALU64352.1 | 33* | 2, 3, 15, 4, 2 | |
| 14, 16, 20, 33, 38 | Vlpg | 5.87 | AOW96324.1 | 33* | 10, 4, 7, 14, 2 | |
| 22 | Vlpg | 5.89 | AOW96302.1 | 34 | 5 | |
| 6, 10, 11, 15, 16, 17, 20 25, 26, 27, 30, 31, 32, 34, 35, 36 | Vsp1h | 6.18 | AJA67245.2 | 22 | 3, 3, 5, 8, 4, 4, 2, 11, 3, 4, 20, 5, 20, 6, 2, 11 | |
| 11 | HflK | 5.79 | AGT27198.1 | 35 | 8 | |
| 11 | HflC | 9.52 | AGT27199.1 | 37 | 8 | |
| 23 | DUF1640 domain-containing protein | 5.42 | AOW96294.1 | 18 | 3 | |
| 18 | Ribonuclease Y | 7.65 | AGT27464.1 | 58 | 3 | |
| 1, 2, 4, 5, 6, 7, 8, 9, 10, 11, 21, 22, 30, 32, 33 | Flagellin | 5.36 | AGT27144.1 | 35 | 11, 13, 9, 10, 12, 11, 12, 10, 11, 10, 10, 13, 11, 10, 12 | |
| 6, 22, 33 | Flagellar assembly protein-FliH | 5.28 | AGT27286.1 | 35 | 14, 3, 3 | |
| 28 | Flagellar protein | 5.33 | AGT27283.1 | 24 | 2 | |
| 2, 11, 14 | Flagellar protein | 8.38 | AGT27611.1 | 39 | 10, 2, 3 | |
| 23 | Flagellar hook assembly protein-FlgD | 5.49 | AGT27281.1 | 16 | 2 | |
| 38 | Flagellar basal-body rod protein-FlgC | 8.92 | AGT27290.1 | 17 | 2 | |
| 40 | Flagellar motor switch protein-FliM | 5.09 | AGT27275.1 | 39 | 2 | |
| 1, 2, 5, 6, 8, 11, 22 | GlpQi | 5.68 | AGT27237.1 | 39 | 16, 10, 2, 13, 9, 11, 15 | |
| 1, 31 | Phosphate ABC transporter substrate-binding protein | 6.92 | AGT27210.1 | 31 | 2, 13 | |
| 2, 4, 5, 7, 8, 19, 22 | 60 kDa chaperonin | 5.28 | AGT27591.1 | 59 | 5, 10, 4, 2, 4, 3, 8 | |
| 3, 18 | ABC transporter substrate binding protein | 6.11 | AGT27324.1 | 61 | 32, 19 | |
| 3, 18, 19 | ABC transporter substrate binding protein | 5.90 | AGT27323.1 | 61 | 18, 12, 4 | |
| 8, 21 | Chaperone DnaK | 5.00 | AGT27477.1 | 69 | 7, 40 | |
| 10, 11 | ATP-dependent zinc metalloprotease-FtsH | 8.61 | AGT27731.1 | 71 | 2, 2 | |
| 11 | Holliday junction ATP-dependent DNA helicase-RuvB | 7.04 | AGT27027.1 | 38 | 2 | |
| 11 | ATPase | 6.39 | AGT27171.1 | 37 | 17 | |
| 11, 20, 22 | ABC-transporter binding protein | 9.26 | AGT27698.1 | 35 | 11, 2, 2 | |
| 28, 29 | V-type protein ATPase subunit E | 5.49 | AGT27099.1 | 23 | 10, 10 | |
| 31 | Phosphate import ATP-binding protein-PstB | 6.22 | AGT27213.1 | 29 | 9 | |
| 39 | ATP-dependent Clp protease ATP-binding subunit-ClpX | 7.97 | AGT27557.1 | 48 | 2 | |
| 8, 31 | Uncharacterized protein | 8.33 | WP_082002168.1 | 30 | 2, 4 | |
| 31 | Triosephosphate isomerase-TpiA | 6.23 | AGT27058.1 | 28 | 13 | |
| 32 | 5’-methylthioadenosine/S-adenoslyhomocystein nucleosidase | 5.97 | WP_082583095.1 | 25 | 5 | |
| 39 | Pyruvate kinase | 6.18 | AGT27339.1 | 53 | 21 | |
| 39 | Inosine-5’-monophosphate dehydrogenase-GuaB | 8.48 | AJA67229.1 | 53 | 7 | |
| 11 | Threonylcarbamoyl-AMP synthase | 9.35 | AGT27679.1 | 38 | 4 | |
| 15, 30, 32 | 50 S ribosomal protein-L25 | 6.77 | AGT27728.1 | 21 | 3, 2, 6 | |
| 18 | Lysine-tRNA ligase | 8.90 | AGT27602.1 | 61 | 8 | |
| 23, 25 | 30 S ribosomal protein-S10 | 10.05 | AGT27452.1 | 12 | 2, 2 | |
| 24 | Elongation factor G | 5.50 | AGT27495.1 | 77 | 2 | |
| 25 | 50 S ribosomal protein L21 | 9.70 | AGT27721.1 | 12 | 4 | |
| 26, 27 | 50 S ribosomal protein L5 | 9.60 | AGT26990.1 | 20 | 2, 4 | |
| 26, 27, 35 | 50 S ribosomal protein L9 | 9.62 | AGT27115.1 | 19 | 4, 4, 2 | |
| 32 | 50 S ribosomal protein L3 | 9.83 | AGT26984.1 | 23 | 2 | |
| 37 | 50 S ribosomal protein L19 | 10.23 | AGT27642.1 | 17 | 2 | |
| 38 | 30 S ribosomal protein S7 | 9.99 | AGT26980.1 | 18 | 2 | |
| 7 | Ribosome-binding ATPase YchF | 5.40 | AGT27227.1 | 41 | 3 | |
| 2 | Ornithine carbamoyltransferase | 5.74 | WP_043867909.1 | 37 | 7 | |
| 2 | Phosphoglycerate kinase | 5.84 | AGT27059.1 | 43 | 4 | |
| 4, 5, 22 | Enolase | 5.05 | AGT27330.1 | 47 | 3, 2, 2 | |
| 11, 14, 20, 33 | GAPDHj | 8.32 | AGT27060.1 | 36 | 17, 3, 16, 2 | |
| 11 | Rod shape-determining protein | 6.86 | AGT27659.1 | 38 | 17 | |
| 10 | Serine protease | 8.99 | WP_082002164.1 | 53 | 3 | |
| 39 | M18 family aminopeptidase | 6.03 | AGT27354.1 | 52 | 7 | |
| 18 | Transcription termination/antitermination protein-NusA | 4.74 | AGT27741.1 | 55 | 2 | |
| 4, 5, 6, 22, 33 | DNA-directed RNA polymerase subunit alpha-RpoA | 5.11 | AGT27462.1 | 38 | 17, 16, 15, 18, 3 | |
| 28, 29 | Transcription termination/antitermination protein-NusG | 5.48 | AGT27376.1 | 21 | 12, 6 | |
| 11 | Spermidine/putrescine import ATP-binding protein | 8.78 | AGT27580.1 | 40 | 3 | |
| 22 | Sperimidine/putrescine ABC transporter substrate-binding protein | 5.46 | AGT27583.1 | 41 | 13 | |
| 32 | Protein GrpE | 5.38 | AGT27478.1 | 21 | 4 | |
| 37, 38 | Probable chemoreceptor glutamine deamidase-CheD | 8.63 | AGT27553.1 | 18 | 3, 4 | |
| 4, 8, 12, 37 | Uncharacterized protein | 8.22 | AGT27688.1 | 77 | 4, 2, 13, 2 | |
| 6 | Uncharacterized protein | 5.63 | AOW96351.1 | 35 | 6 | |
| 8 | Uncharacterized protein | 5.18 | AGT27657.1 | 30 | 5 | |
| 11, 20 | Uncharacterized protein | 9.02 | AGT27150.2 | 44 | 3, 4 | |
| 11 | Uncharacterized protein | 6.15 | AOW96199.1 | 37 | 2 | |
| 11, 20 | Uncharacterized protein | 8.91 | AGT27497.1 | 42 | 2, 2 | |
| 13 | Uncharacterized protein | 8.80 | AGT27550.1 | 67* | 16 | |
| 21 | Uncharacterized protein | 5.09 | AOW96138.1 | 28 | 3 | |
| 22 | Uncharacterized protein | 5.15 | AOW96267.1 | 35 | 2 | |
| 23 | Uncharacterized protein | 5.44 | AGT27223.1 | 15 | 5 | |
| 23 | Uncharacterized protein | 5.72 | AOW96390.1 | 19 | 5 | |
| 25 | Uncharacterized protein | 5.91 | AOW96369.1 | 29 | 3 | |
| 23, 24, 25 | Uncharacterized protein | 6.18 | AOW96394.1 | 15* | 8, 10, 6 | |
| 29 | Uncharacterized protein | 8.37 | AGT27607.1 | 25 | 5 | |
| 30 | Uncharacterized protein | 6.86 | AGT27219.1 | 28 | 4 | |
| 32 | Uncharacterized protein | 7.66 | AGT27434.1 | 27 | 2 | |
| 35 | Uncharacterized protein | 6.21 | AGT27719.1 | 18* | 3 | |
| 39 | Uncharacterized protein | 8.11 | AGT27044.1 | 59 | 3 | |
| 23 | Heat-shock protein | 5.72 | WP_043867868.1 | 17 | 8 | |
| 11 | Carboxylesterase | 9.53 | AGT27588.1 | 38 | 2 | |
| 16, 30, 36 | Peptidoglycan-binding protein-LysM | 8.52 | AGT27318.1 | 44* | 5, 2, 2, | |
| 4, 5, 6, 8, 11, 22 | Putative lipoprotein | 5.24 | ALN43426.1 | 35 | 2, 3, 4, 3, 3, 13 | |
Proteins are categorized according to common gene ontology (GO) terms as listed in UniProtKB. Each spot number (no.) corresponds respectively to the no. of unique peptides detected during protein identification.
GO terms = gene ontology terms; pI = isoelectric point; Pred MW = predicted molecular weight; CC = cellular component; MF = molecular function; BP = biological process; Vlp = variable large protein; Vsp = Variable small protein; GlpQ = glycerophosphodiester phosphodiesterase; GAPDH = glyceraldehyde-3-phosphate dehydrogenase; * = predicted pI and MW excludes signal sequence if detected via ExPASy.
Figure 2IgM 2DE immunoblot with sera from B. miyamotoi-infected CD1 mice collected at 8 dpi. Antigen recognition was examined in response to needle inoculation of B. miyamotoi LB-2001 (a) or through tick bite from B. miyamotoi-infected I. scapularis originating from Minnesota (b). For both sets of immunoblots an acidic (pH 4–7) and basic (6–11) pH range were utilized. Sera were diluted 1:200 for immunoblotting. Immunogenic proteins spots (number 1–17) were excised from a corresponding silver stain 2DE and identified by mass spectrometry. All proteins were consistently numbered across immunoblot and time point and resulting identities from individual spots listed in Table 1 and Supplemental Table 1. Molecular weight of proteins are expressed in kDa. Dashed lines demarcate where the gel has been cropped to exclude molecular weight markers. Uncropped blots can be viewed in Supplemental Fig. 2.
Figure 3IgG 2DE immunoblot with sera from B. miyamotoi-infected CD1 mice collected at 40 dpi. Antigen recognition was examined in response to needle inoculation of B. miyamotoi LB-2001 (a) or through tick bite from B. miyamotoi-infected I. scapularis originating from Minnesota (b). For both sets of immunoblots an acidic (pH 4–7) and basic (6–11) pH range were utilized. Sera were diluted 1:200 for immunoblotting. Immunogenic protein spots (numbers 1–11 and 14–40) were excised from a corresponding silver stain 2DE and identified by mass spectrometry. All proteins were consistently numbered across immunoblot and time point and resulting identities from individual spots listed in Table 1 and Supplemental Table 1. Molecular weight of proteins are expressed in kDa. Dashed lines demarcate where the gel has been cropped to exclude molecular weight markers. Uncropped blots can be viewed in Supplemental Fig. 2.
Recombinant B. miyamotoi candidate proteins IDs with associated percent identity to B. burgdorferi and B. hermsii.
| Protein ID | NCBI accession ID | Predicted MW in kDa | ||
|---|---|---|---|---|
| Uncharacterized protein | AOW96394.1 | 17 | 23 (OspC-ABQ42952.1) | 50 (Alp-GU784814.1) |
| Putative lipoprotein | ALN43426.1 | 35 | 39 (Putative lipoprotein-AAC67199.1) | 62 (Uncharacterized protein-AHH04480.1) |
| GlpQ | AOW95500.1 | 39 | # | 87 (GlpQ-AAT99938.1) |
| Vsp1 | AOW96329.1 | 22 | 46 (OspC-AAB86545.1) | 62 (Vomp-AHH04378.1) |
| VlpC2 | ALU64348.1 | 35 | 37 (VlsE-CAF34025.1) | 77 (Vlp19-U52040.1) |
| VLD2 | AOW96264.1 | 37 | 37 (VlsE-AAC45764.1) | 76 (Vlp42-ABO93439.1) |
| VlpD1 | ALM31565.1 | 34 | 37 (VlsE-CAF34025.1) | 80 (Vlp-AHH13310.1) |
| VlpD8 | ALU64349.1 | 36 | 39 (VlsE-CAH61549.1) | 78 (Vlp-ABF82178.1) |
| VlpD9 | ALU64350.1 | 37 | 39 (VlsE-CAH61549.1) | 84 (Vlp15/16-AAB17735.1) |
| VlpD10 | ALU64352.1 | 36 | 36 (VlsE-CAH61549.1) | 79 (Vlp-AHH13287.1) |
Vlp = variable large protein; Vsp = variable small protein; # = lack of homology compared to B. burgdorferi proteins; MW = molecular weight; VlsE = Vmp-like sequence expressed; Alp = arthropod associated lipoprotein; Vomp = variable outer membrane protein.
Figure 4Multiple sequence alignment of B. miyamotoi proteins identified via mass spectrometry against homologous B. burgdorferi and B. hermsii proteins. (a) B. miyamotoi VlpC2, D2, D1, D8, D9, and D10 (NCBI Accession ID: ALU64348.1, AOW96264.1, ALM31565.1, ALU64349.1, ALU64350.1, ALU64352.1) against B. burgdorferi VlsE (CAH61549.1) and B. hermsii Vlp 15/16 (AAB17735.1); (b) B. miyamotoi Vsp1 (AOW96329.1) against B. burgdorferi OspC (AAB86545.1), and B. hermsii Vomp (variable outer membrane protein) (AHH04378.1); (c) Borrelia miyamotoi P.l. (putative lipoprotein) (ALN43426.1) against B. burgdorferi P.l. (AAC67199.1) and B. hermsii U.p. (uncharacterized protein) (AHH04480.1). Proteins were aligned using MUSCLE and results viewed with Jalview. Gray highlighted regions indicate areas with 60% matching amino acids across compared sequences.
Figure 5Validation of anti-B. miyamotoi murine antibodies against recombinant B. miyamotoi proteins (100 ng). IgM response in CD1 mouse serum collected at 8 dpi to needle (a) or tick (b) inoculation. IgG response in CD1 mouse serum collected at 40 dpi to needle (c) or tick (d) inoculation. All sera were diluted 1:200 for immunoblotting. Molecular weight of proteins is expressed in kDa. P.l. = putative lipoprotein; U.p. = uncharacterized protein; Vlp = variable large protein; Vsp = variable small protein; GlpQ = glycerophosphodiester phosphodiesterase; B. m. lysate = B. miyamotoi whole cell lysate; B. b. lysate = B. burgdorferi whole cell lysate; Vector = empty pETite expression vector. Dashed lines demarcate where the gel has been cropped to exclude molecular weight markers and portions of blots. Uncropped blots blot can be viewed in Supplemental Fig. 2.
Figure 6Evaluation of cross-reactive antibodies present in B. burgdorferi-infected CD1 mice against recombinant B. miyamotoi proteins (100 ng). Pooled sera collected at 14 dpi from CD1 mice exposed to B. burgdorferi (B31)-infected I. scapularis was assayed against B. miyamotoi recombinant proteins and an IgM (a) or IgG (b) antibody response observed. Serum was diluted 1:200 for immunoblotting. Molecular weight of proteins is expressed in kDa. P.l. = putative lipoprotein; U.p. = uncharacterized protein; Vlp = variable large protein; Vsp = variable small protein; GlpQ = glycerophosphodiester phosphodiesterase; B. m. lysate = B. miyamotoi whole cell lysate; B. b. lysate = B. burgdorferi whole cell lysate; Vector = empty pETite expression vector. Dashed lines demarcate where the gel has been cropped to exclude molecular weight markers and portions of blots. Uncropped blots can be viewed in Supplemental Fig. 2.
Figure 7Evaluation of IgG reactivity to B. miyamotoi recombinant antigens (100 ng) using serum collected from a BMD patient (a), and a LD patient (b). Patient serum samples diluted 1:200. Molecular weight of proteins is expressed in kDa. P.l. = putative lipoprotein; U.p. = uncharacterized protein; Vlp = variable large protein; Vsp = variable small protein; GlpQ = glycerophosphodiester phosphodiesterase; B. m. lysate = B. miyamotoi whole cell lysate; B. burgdorferi whole cell lysate; Vector = empty pETite expression vector. Dashed lines demarcate where the gel has been cropped to exclude molecular weight markers and portions of blots. Uncropped blots can be viewed in Supplemental Fig. 2.
Primers used for gene amplification for pETite expression vector cloning.
| Expression product | Forward primer | Reverse primer |
|---|---|---|
| Uncharacterized protein | ||
| Putative lipoprotein | ||
| GlpQ | ||
| Vsp1 | ||
| VlpC2 | ||
| VlpD2 | ||
| VlpD1 | ||
| VlpD8 | ||
| VlpD9 | ||
| VlpD10 |
Vsp = variable small protein; Vlp = variable large protein; underlined nucleotides denote sequences used for expression vector insertion.