| Literature DB >> 31723912 |
Wooho Sim1, Song Yee Kim1, Jinu Han2, Tyler Hyungtaek Rim2, Jin Gu Lee3, Hyo Chae Paik3, Moo Suk Park1.
Abstract
Entities:
Year: 2019 PMID: 31723912 PMCID: PMC6849041 DOI: 10.4266/acc.2018.00402
Source DB: PubMed Journal: Acute Crit Care ISSN: 2586-6052
Figure 1.(A, B) Hyperkeratinized eczematous skin lesions were seen on the face and both arms. (C) Fundus photograph shows a depigmented retina. (D) Spectralis optical coherence tomography revealed absence of central pit, which was consistent with fovea plana (arrow: absence of foveal pit), whereas normal control showed normal foveal pit in small white box (arrow).
Figure 2.(A) Posteroanterior chest radiograph taken before lung transplantation shows peribronchial ground-glass opacity and reticulation in both lung zones. (B-D) Contrast-enhanced computed tomography scans show multifocal peribronchial ground-glass opacity with traction bronchiectasis and reticulation, indicating bilateral pulmonary fibrosis.
Results of the genetic examination of HPS
| Gene | Nucleotide | Amino acid | Zygosity | SIFT | PolyPhen-2 | CADD | gnomAD |
|---|---|---|---|---|---|---|---|
| c.81delG | p.Leu28Ter | Heterozygote | - | - | 24.8[ | Not found | |
| c.1996G>A | p.Glu666Lys | Heterozygote | deleterious (0)[ | probably damaging (0.999)[ | 31[ | 2/248814[ |
HPS: Hermansky-Pudlak syndrome; SIFT: sorting intolerant from tolerant; PolyPhen-2: polymorphism phenotyping v2; CADD: combined annotationdependent depletion; gnomAD: genome aggregation database.
CADD score of greater of equal 10 indicates that these are predicted to be the 10% most deleterious substitutions, a score of greater or equal 20 indicates the 1% most deleterious and so on;
Probabilities less than 0.05 are predicted to be deleterious;
Probabilistic score above 0.85 is classified as “probably damaging”;
Allele count/allele number.
Figure 3.Diagram of the first hospitalization period. ICU: intensive care unit; ECMO: extracorporeal membrane oxygenation; VV-ECMO: veno-venous ECMO.