| Literature DB >> 31723323 |
Łukasz Kaczmarek1, Daria Grobys2, Adam Kulpa1, Tomasz Bartylak1, Hanna Kmita2, Marta Kepel3, Andrzej Kepel3, Milena Roszkowska1,2.
Abstract
The knowledge of the diversity and distribution of tardigrades on Madagascar is rather poor. To date, only 13 tardigrade taxa have been reported from this region (including one Milnesium species). We examined 46 specimens belonging to two new-to-science species of the genus Milnesium described herein using an integrative approach, including classical morphology and molecular marker (COI, ITS-2 and 28S rRNA) analysis. The species were found in two moss and lichen samples collected in the Ivohibory forest in Fianarantsoa Province. Milnesium matheusi sp. nov., with claw configuration [3-3]-[3-3] and rather wide buccal tube, morphologically is most similar to: Mil. beatae Roszkowska, Ostrowska & Kaczmarek, 2015, Mil. bohleberi Bartels, Nelson, Kaczmarek & Michalczyk, 2014, Mil. eurystomum Maucci, 1991, Mil. shilohae Meyer, 2015 and Mil. tumanovi Pilato, Sabella & Lisi, 2016; however, it differs from these by morphometric characteristics. Milnesium wrightae sp. nov., by the presence of four points on secondary branches of claws IV, is most similar to Mil. quadrifidum Nederström, 1919. However, Mil. wrightae sp. nov. differs from Mil. quadrifidum by claw configuration ([4-4]-[4-4] in Mil. quadrifidum vs. [3-3]-[4-4] in Mil. wrightae sp. nov.), but also by the position of the fourth points on secondary branches of claws IV, which are located near the base of the claw in the new species and near the top of the claw in Mil. quadrifidum. Genotypic analysis showed that Mil. matheusi sp. nov. is most similar to Milnesium sp. (28S rRNA), Mil. variefidum (COI) and Mil. t. tardigradum (ITS-2) while Mil. wrightae sp. nov. is most similar to Milnesium sp. (28S rRNA), Mil. variefidum (COI) and Mil. matheusi (ITS-2). Five Milnesium taxa are recorded from the African region, including the two new species from Madagascar reported in this study. Łukasz Kaczmarek, Daria Grobys, Adam Kulpa, Tomasz Bartylak, Hanna Kmita, Marta Kepel, Andrzej Kepel, Milena Roszkowska.Entities:
Keywords: Milnesiidae ; Milnesium matheusi sp. nov.; Milnesium wrightae sp. nov.; integrative taxonomy; tropical region
Year: 2019 PMID: 31723323 PMCID: PMC6834724 DOI: 10.3897/zookeys.884.29469
Source DB: PubMed Journal: Zookeys ISSN: 1313-2970 Impact factor: 1.546
Primers used for amplification and sequencing of DNA fragments.
| DNA fragment | Direction | Code | Sequence (5’-3’) | Reference |
|---|---|---|---|---|
|
| Forvard | bcdF01 | CATTTTCHACTAAYCATAARGATATTGG |
|
| Reverse | bcdR04 | TATAAACYTCDGGATGNCCAAAAAA |
| |
| ITS-2 | Forvard | ITS2_Eutar_Ff | CGTAACGTGAATTGCAGGAC |
|
| Reverse | ITS2_Eutar_Rr | TGATATGCTTAAGTTCAGCGG | ||
| 28S rRNA | Forvard | 28SF0001 | ACCCVCYNAATTTAAGCATAT |
|
| Reverse | 28SR0990 | CCTTGGTCCGTGTTTCAAGAC |
PCR cocktails used for the amplification of DNA fragments.
| Component | Concentration | Additional note |
|---|---|---|
| H2O | – | sterile MQ |
| buffer | 1× | 5X Phusion HF Buffer; Thermo Scientific |
| dNTPs | 200 µM | dNTP Mix; Thermo Scientific |
| forward primer | 0.5 µM | – |
| reverse primer | 0.5 µM | – |
| polymerase | 0.02 U/µl | Phusion High-Fidelity DNA Polymerase; Thermo Scientific |
| DNA | – | – |
PCR programmes used for the amplification of COI, ITS-2 and 28S rRNA.
| Step |
| ITS-2 and 28S rRNA | ||||
|---|---|---|---|---|---|---|
| Cycles | Time [min.:sec.] | Temp. [°C] | Cycles | Time [min:sec] | Temp. [°C] | |
| initial denaturation | – | 05:00 | 98 | – | 05:00 | 98 |
| denaturation | 5 | 00:30 | 98 | – | – | – |
| annealing | 00:30 | 45 | – | – | – | |
| extension | 01:00 | 72 | – | – | – | |
| denaturation | 30 | 00:30 | 98 | 35 | 00:30 | 98 |
| annealing | 00:30 | 50 | 00:30 | 50 | ||
| extension | 01:00 | 72 | 01:00 | 72 | ||
| final extension | – | 07:00 | 72 | – | 07:00 | 72 |
Figures 1–3.sp. nov. 1 Habitus (ventral view) (holotype) 2 dorsal cuticle with pseudopores (holotype) 3 buccal tube (holotype). All in PCM.
Figures 4, 5.sp. nov. 4 Claws II (paratype), arrow indicates bar under claw 5 claws IV (holotype), arrowhead indicates small accessory point. All in PCM.
Measurements and values of selected morphological structures of adult females of sp. nov. mounted in Hoyer’s medium (N – number of specimens/structures measured, RANGE refers to the smallest and the largest structure among all measured specimens; SD – standard deviation, – ratio of the length of a given structure to the length of the buccal tube expressed as a percentage).
| Character | N | Range | Mean |
| Holotype | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| µm |
| µm |
| µm |
| µm |
| ||||||
| Body length | 6 | 630 | – | 766 | – | – | – | 691 | – | 45 | – | 766 | – |
| Peribuccal papillae length | 5 | 10.0 | – | 12.0 |
| – |
| 11.0 |
| 0.8 |
| 11.8 |
|
| Lateral papillae length | 7 | 9.4 | – | 10.7 |
| – |
| 10.0 |
| 0.4 |
| 10.3 |
|
| Buccal tube | |||||||||||||
| Length | 9 | 51.3 | – | 62.5 | – | – | – | 56.6 | – | 3.8 | – | 62.5 | – |
| Stylet support insertion point | 9 | 34.5 | – | 42.3 |
| – |
| 38.4 |
| 2.4 |
| 41.5 |
|
| Anterior width | 9 | 25.2 | – | 35.9 |
| – |
| 28.9 |
| 3.2 |
| 31.4 |
|
| Standard width | 9 | 23.1 | – | 31.1 |
| – |
| 26.3 |
| 2.7 |
| 29.4 |
|
| Posterior width | 9 | 23.0 | – | 30.2 |
| – |
| 25.7 |
| 2.6 |
| 28.9 |
|
| Standard width/length ratio | 9 | 42% | – | 51% | – | – | – | 46% | – | 3% | – | 47% | – |
| Posterior/anterior width ratio | 9 | 84% | – | 94% | – | – | – | 89% | – | 4% | – | 92% | – |
| Claw 1 lengths | |||||||||||||
| External primary branch | 9 | 17.2 | – | 21.8 |
| – |
| 18.9 |
| 1.5 |
| 21.8 |
|
| External base + secondary branch | 9 | 13.3 | – | 16.7 |
| – |
| 15.0 |
| 1.2 |
| 16.6 |
|
| External spur | 7 | 3.5 | – | 5.3 |
| – |
| 4.4 |
| 0.7 |
| ? | ? |
| External branches length ratio | 9 | 76% | – | 82% | – | – | – | 80% | – | 2% | – | 76% | – |
| Internal primary branch | 9 | 16.0 | – | 21.1 |
| – |
| 18.3 |
| 1.6 |
| 21.1 |
|
| Internal base + secondary branch | 9 | 13.3 | – | 16.6 |
| – |
| 14.8 |
| 1.1 |
| 16.3 |
|
| Internal spur | 9 | 3.3 | – | 5.5 |
| – |
| 4.4 |
| 0.8 |
| 5.5 |
|
| Internal branches length ratio | 9 | 77% | – | 88% | – | – | – | 81% | – | 4% | – | 77% | – |
| Claw 2 lengths | |||||||||||||
| External primary branch | 8 | 17.4 | – | 21.2 |
| – |
| 19.5 |
| 1.4 |
| 21.2 |
|
| External base + secondary branch | 7 | 13.7 | – | 17.0 |
| – |
| 15.0 |
| 1.1 |
| 17.0 |
|
| External spur | 3 | 3.9 | – | 4.9 |
| – |
| 4.4 |
| 0.5 |
| 4.9 |
|
| External branches length ratio | 7 | 72% | – | 81% | – | – | – | 77% | – | 3% | – | 80% | – |
| Internal primary branch | 8 | 16.8 | – | 20.5 |
| – |
| 18.7 |
| 1.3 |
| 20.2 |
|
| Internal base + secondary branch | 9 | 13.0 | – | 16.3 |
| – |
| 14.7 |
| 1.1 |
| 16.3 |
|
| Internal spur | 9 | 3.4 | – | 5.8 |
| – |
| 4.4 |
| 0.8 |
| 4.7 |
|
| Internal branches length ratio | 8 | 74% | – | 81% | – | – | – | 78% | – | 3% | – | 81% | – |
| Claw 3 lengths | |||||||||||||
| External primary branch | 5 | 19.7 | – | 21.0 |
| – |
| 20.5 |
| 0.6 |
| ? | ? |
| External base + secondary branch | 6 | 14.2 | – | 16.3 |
| – |
| 15.4 |
| 0.7 |
| ? | ? |
| External spur | 5 | 3.5 | – | 5.2 |
| – |
| 4.4 |
| 0.7 |
| ? | ? |
| External branches length ratio | 5 | 72% | – | 82% | – | – | – | 75% | – | 4% | – | ? | – |
| Internal primary branch | 5 | 18.9 | – | 20.4 |
| – |
| 19.7 |
| 0.6 |
| ? | ? |
| Internal base + secondary branch | 6 | 13.7 | – | 16.0 |
| – |
| 14.9 |
| 0.8 |
| ? | ? |
| Internal spur | 5 | 3.8 | – | 5.6 |
| – |
| 4.8 |
| 0.7 |
| ? | ? |
| Internal branches length ratio | 5 | 70% | – | 79% | – | – | – | 75% | – | 4% | – | ? | – |
| Claw 4 lengths | |||||||||||||
| Anterior primary branch | 7 | 19.6 | – | 23.0 |
| – |
| 20.9 |
| 1.3 |
| 23.0 |
|
| Anterior base + secondary branch | 7 | 14.6 | – | 17.2 |
| – |
| 15.8 |
| 0.9 |
| 17.2 |
|
| Anterior spur | 6 | 4.1 | – | 6.3 |
| – |
| 5.4 |
| 0.9 |
| 6.0 |
|
| Anterior branches length ratio | 7 | 71% | – | 80% | – | – | – | 76% | – | 4% | – | 75% | – |
| Posterior primary branch | 7 | 20.5 | – | 24.0 |
| – |
| 21.8 |
| 1.1 |
| 24.0 |
|
| Posterior base + secondary branch | 7 | 15.2 | – | 17.7 |
| – |
| 16.1 |
| 0.8 |
| 17.7 |
|
| Posterior spur | 7 | 4.4 | – | 5.8 |
| – |
| 5.2 |
| 0.6 |
| 5.5 |
|
| Posterior branches length ratio | 7 | 70% | – | 76% | – | – | – | 74% | – | 2% | – | 74% | – |
Measurements and values of selected morphological structures of adult males (with modified claws I) of sp. nov. mounted in Hoyer’s medium (N – number of specimens/structures measured, RANGE refers to the smallest and the largest structure among all measured specimens; SD – standard deviation, – ratio of the length of a given structure to the length of the buccal tube expressed as a percentage).
| Character | N | Range | Mean |
| |||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| µm |
| µm |
| µm |
| ||||||
| Body length | 2 | 409 | – | 428 | – | – | – | 419 | – | 13 | – |
| Peribuccal papillae length | 3 | 3.0 | – | 3.9 |
| – |
| 3.5 |
| 0.5 |
|
| Lateral papillae length | 3 | 5.6 | – | 6.0 |
| – |
| 5.9 |
| 0.2 |
|
| Buccal tube | |||||||||||
| Length | 3 | 33.8 | – | 34.5 | – | – | – | 34.2 | – | 0.4 | – |
| Stylet support insertion point | 2 | 21.2 | – | 22.3 |
| – |
| 21.8 |
| 0.8 |
|
| Anterior width | 3 | 9.4 | – | 11.2 |
| – |
| 10.5 |
| 1.0 |
|
| Standard width | 3 | 9.1 | – | 9.8 |
| – |
| 9.5 |
| 0.4 |
|
| Posterior width | 3 | 9.4 | – | 10.2 |
| – |
| 9.8 |
| 0.4 |
|
| Standard width/length ratio | 3 | 27% | – | 28% | – | – | – | 28% | – | 1% | – |
| Posterior/anterior width ratio | 3 | 88% | – | 100% | – | – | – | 94% | – | 6% | – |
| Claw 1 lengths | |||||||||||
| External primary branch | 2 | 15.8 | – | 16.3 |
| – |
| 16.1 |
| 0.4 |
|
| External base + secondary branch | 3 | 14.1 | – | 15.0 |
| – |
| 14.6 |
| 0.5 |
|
| External spur | 2 | 3.2 | – | 3.4 |
| – |
| 3.3 |
| 0.1 |
|
| External branches length ratio | 2 | 87% | – | 94% | – | – | – | 90% | – | 5% | – |
| Internal primary branch | 3 | 14.9 | – | 15.7 |
| – |
| 15.4 |
| 0.5 |
|
| Internal base + secondary branch | 3 | 14.0 | – | 14.5 |
| – |
| 14.2 |
| 0.3 |
|
| Internal spur | 3 | 3.0 | – | 3.7 |
| – |
| 3.4 |
| 0.4 |
|
| Internal branches length ratio | 3 | 89% | – | 94% | – | – | – | 92% | – | 2% | – |
| Claw 2 lengths | |||||||||||
| External primary branch | 2 | 16.9 | – | 17.9 |
| – |
| 17.4 |
| 0.7 |
|
| External base + secondary branch | 1 | 13.2 | – | 13.2 |
| – |
| 13.2 |
| ? | ? |
| External spur | 1 | 3.5 | – | 3.5 |
| – |
| 3.5 |
| ? | ? |
| External branches length ratio | 1 | 74% | – | 74% | – | – | – | 74% | – | ? | – |
| Internal primary branch | 3 | 16.4 | – | 16.9 |
| – |
| 16.7 |
| 0.3 |
|
| Internal base + secondary branch | 2 | 12.7 | – | 12.8 |
| – |
| 12.8 |
| 0.1 |
|
| Internal spur | 2 | 3.5 | – | 5.0 |
| – |
| 4.3 |
| 1.1 |
|
| Internal branches length ratio | 2 | 75% | – | 76% | – | – | – | 76% | – | 1% | – |
| Claw 3 lengths | |||||||||||
| External primary branch | 3 | 16.2 | – | 17.4 |
| – |
| 16.8 |
| 0.6 |
|
| External base + secondary branch | 2 | 12.1 | – | 12.8 |
| – |
| 12.5 |
| 0.5 |
|
| External spur | 1 | 3.9 | – | 3.9 |
| – |
| 3.9 |
| ? | ? |
| External branches length ratio | 2 | 74% | – | 75% | – | – | – | 74% | – | 1% | – |
| Internal primary branch | 3 | 14.8 | – | 17.0 |
| – |
| 16.0 |
| 1.1 |
|
| Internal base + secondary branch | 2 | 12.7 | – | 13.0 |
| – |
| 12.9 |
| 0.2 |
|
| Internal spur | 2 | 2.9 | – | 4.0 |
| – |
| 3.5 |
| 0.8 |
|
| Internal branches length ratio | 2 | 75% | – | 88% | – | – | – | 81% | – | 9% | – |
| Claw 4 lengths | |||||||||||
| Anterior primary branch | 3 | 16.3 | – | 17.0 |
| – |
| 16.6 |
| 0.4 |
|
| Anterior base + secondary branch | 2 | 12.4 | – | 12.9 |
| – |
| 12.7 |
| 0.4 |
|
| Anterior spur | 1 | 3.8 | – | 3.8 |
| – |
| 3.8 |
| ? | ? |
| Anterior branches length ratio | 2 | 75% | – | 79% | – | – | – | 77% | – | 3% | – |
| Posterior primary branch | 3 | 17.7 | – | 18.8 |
| – |
| 18.3 |
| 0.6 |
|
| Posterior base + secondary branch | 3 | 12.7 | – | 13.7 |
| – |
| 13.1 |
| 0.6 |
|
| Posterior spur | 2 | 3.0 | – | 4.1 |
| – |
| 3.6 |
| 0.8 |
|
| Posterior branches length ratio | 3 | 69% | – | 73% | – | – | – | 72% | – | 2% | – |
Sequences of 28S rRNA, COI and ITS-2 of taxa available in GenBank and used in differential diagnosis.
| DNA marker | Taxon | Accession number | Source |
|---|---|---|---|
| 28S rRNA |
| Adams et. al. unpublished | |
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| Adams et. al. unpublished | ||
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| Adams et. al. unpublished | ||
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| Adams et. al. unpublished | |
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| Adams et. al. unpublished | ||
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| Zawierucha unpublished | ||
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| Zawierucha unpublished | ||
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| Fox et al. unpublished | |
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| Schill unpublished | |
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Figures 6–8.sp. nov. 6 Habitus (ventral view) (holotype) 7 dorsal cuticle with pseudopores (holotype) 8 buccal tube (paratype). All in PCM.
Figures 9–11.sp. nov. 9 Claws I (paratype), arrow indicates bar under claw 10 claws IV (holotype), empty arrowhead indicates small accessory point, filled arrowheads indicate the fourth points on secondary branches near the base of the claw 11 focus on the fourth points on secondary branches near the base of the claw IV (holotype, filled arrowheads). All in PCM.
Measurements and values of selected morphological structures of females of sp. nov. mounted in Hoyer’s medium (N – number of specimens/structures measured, RANGE refers to the smallest and the largest structure among all measured specimens; SD – standard deviation, – ratio of the length of a given structure to the length of the buccal tube expressed as a percentage).
| Character | N | Range | Mean |
| Holotype | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| µm |
| µm |
| µm |
| µm |
| ||||||
| Body length | 17 | 329 | – | 553 | – | – | – | 448 | – | 60 | – | 515 | – |
| Peribuccal papillae length | 12 | 6.8 | – | 10.4 |
| – |
| 9.0 |
| 1.1 |
| 9.3 |
|
| Lateral papillae length | 8 | 5.1 | – | 8.4 |
| – |
| 6.7 |
| 1.0 |
| 6.1 |
|
| Buccal tube | |||||||||||||
| Length | 17 | 44.8 | – | 65.6 | – | – | – | 58.4 | – | 6.5 | – | 60.9 | – |
| Stylet support insertion point | 15 | 31.2 | – | 45.8 |
| – |
| 40.8 |
| 4.7 |
| 43.9 |
|
| Anterior width | 16 | 14.0 | – | 23.0 |
| – |
| 19.0 |
| 2.5 |
| 20.1 |
|
| Standard width | 14 | 13.0 | – | 20.7 |
| – |
| 17.7 |
| 2.3 |
| 19.8 |
|
| Posterior width | 14 | 12.7 | – | 20.1 |
| – |
| 16.9 |
| 2.2 |
| 18.9 |
|
| Standard width/length ratio | 14 | 28% | – | 36% | – | – | – | 31% | – | 3% | – | 33% | – |
| Posterior/anterior width ratio | 14 | 88% | – | 97% | – | – | – | 91% | – | 3% | – | 94% | – |
| Claw 1 lengths | |||||||||||||
| External primary branch | 16 | 11.0 | – | 15.2 |
| – |
| 13.0 |
| 1.2 |
| 13.8 |
|
| External base + secondary branch | 15 | 9.6 | – | 14.9 |
| – |
| 12.6 |
| 1.4 |
| 13.8 |
|
| External spur | 7 | 2.8 | – | 3.7 |
| – |
| 3.2 |
| 0.3 |
| ? | ? |
| External branches length ratio | 14 | 87% | – | 103% | – | – | – | 97% | – | 5% | – | 100% | – |
| Internal primary branch | 16 | 10.9 | – | 14.0 |
| – |
| 12.4 |
| 0.9 |
| 12.7 |
|
| Internal base + secondary branch | 16 | 9.0 | – | 14.0 |
| – |
| 12.1 |
| 1.4 |
| 12.8 |
|
| Internal spur | 13 | 2.8 | – | 3.6 |
| – |
| 3.1 |
| 0.3 |
| 3.2 |
|
| Internal branches length ratio | 15 | 83% | – | 103% | – | – | – | 98% | – | 7% | – | 101% | – |
| Claw 2 lengths | |||||||||||||
| External primary branch | 15 | 10.6 | – | 15.3 |
| – |
| 13.3 |
| 1.2 |
| 14.6 |
|
| External base + secondary branch | 14 | 9.3 | – | 13.7 |
| – |
| 12.2 |
| 1.4 |
| 12.5 |
|
| External spur | 8 | 3.1 | – | 4.1 |
| – |
| 3.4 |
| 0.3 |
| 4.1 |
|
| External branches length ratio | 13 | 78% | – | 103% | – | – | – | 92% | – | 7% | – | 86% | – |
| Internal primary branch | 14 | 10.9 | – | 15.0 |
| – |
| 12.5 |
| 1.1 |
| 13.5 |
|
| Internal base + secondary branch | 15 | 9.0 | – | 14.2 |
| – |
| 12.1 |
| 1.5 |
| 12.9 |
|
| Internal spur | 12 | 2.6 | – | 4.6 |
| – |
| 3.4 |
| 0.6 |
| 3.7 |
|
| Internal branches length ratio | 13 | 82% | – | 103% | – | – | – | 95% | – | 8% | – | 96% | – |
| Claw 3 lengths | |||||||||||||
| External primary branch | 17 | 10.8 | – | 15.2 |
| – |
| 13.2 |
| 1.4 |
| ? | ? |
| External base + secondary branch | 16 | 9.5 | – | 15.7 |
| – |
| 12.0 |
| 1.6 |
| ? | ? |
| External spur | 7 | 3.0 | – | 4.0 |
| – |
| 3.3 |
| 0.4 |
| ? | ? |
| External branches length ratio | 16 | 79% | – | 103% | – | – | – | 92% | – | 6% | – | ? | – |
| Internal primary branch | 17 | 10.7 | – | 14.1 |
| – |
| 12.4 |
| 1.1 |
| ? | ? |
| Internal base + secondary branch | 16 | 9.0 | – | 14.1 |
| – |
| 11.5 |
| 1.5 |
| ? | ? |
| Internal spur | 10 | 2.4 | – | 4.0 |
| – |
| 3.3 |
| 0.5 |
| ? | ? |
| Internal branches length ratio | 16 | 80% | – | 102% | – | – | – | 93% | – | 7% | – | ? | – |
| Claw 4 lengths | |||||||||||||
| Anterior primary branch | 12 | 12.6 | – | 18.4 |
| – |
| 15.2 |
| 1.6 |
| 15.8 |
|
| Anterior base + secondary branch | 12 | 11.2 | – | 17.4 |
| – |
| 14.7 |
| 1.8 |
| 16.5 |
|
| Anterior spur | 7 | 2.7 | – | 5.2 |
| – |
| 3.7 |
| 0.8 |
| 4.2 |
|
| Anterior branches length ratio | 11 | 85% | – | 104% | – | – | – | 97% | – | 6% | – | 104% | – |
| Posterior primary branch | 12 | 11.7 | – | 20.0 |
| – |
| 16.0 |
| 2.2 |
| 17.5 |
|
| Posterior base + secondary branch | 11 | 12.1 | – | 18.5 |
| – |
| 15.6 |
| 2.2 |
| 17.5 |
|
| Posterior spur | 7 | 2.9 | – | 5.2 |
| – |
| 3.8 |
| 0.9 |
| 4.4 |
|
| Posterior branches length ratio | 10 | 92% | – | 103% | – | – | – | 98% | – | 4% | – | 100% | – |