| Literature DB >> 31720341 |
Shuo Zhang1,2, Christian J F Bertens1,2,3, Roel J Erckens1,4, Frank J H M van den Biggelaar1,2,3, Tos T J M Berendschot1,2, Carroll A B Webers1,2, Rudy M M A Nuijts1,2,3,4, Marlies Gijs1,2,3.
Abstract
This article includes datasets acquired by Raman spectroscopy from in vivo and in vitro ocular samples collected from the dataset from Bertens and Zhang et al., "Confocal Raman spectroscopy: Evaluation of a non-invasive technique for the detection of topically applied ketorolac tromethamine in vitro and in vivo" (Bertens and Zhang, et al.). Detection of ketorolac tromethamine in pig eyes was performed in vitro and rabbit eyes in vivo. Extracted aqueous humor samples from pig and rabbit eyes were measured in vitro using a cuvette. This manuscript shows the spectral Raman data without pre-treatment or analysis from ocular tissues and provides further information towards aqueous humor research via alternative data processing methods. Furthermore, the raw data enclosed may be used for future aqueous humor investigations and pharmaceutical research.Entities:
Keywords: Aqueous humor; Ketorolac tromethamine; Ophthalmology; Pig eyes; Rabbits; Raman spectroscopy
Year: 2019 PMID: 31720341 PMCID: PMC6839021 DOI: 10.1016/j.dib.2019.104694
Source DB: PubMed Journal: Data Brief ISSN: 2352-3409
Fig. 1(a) Fingerprint spectra of Ketorolac powder. (b) Determination of the location in the eye using high-wavenumber Raman spectra. Spectra are from pig eyes, 3 frames of 10 seconds averaged measured using a Jena lens.
Main characteristic bands assignment of ketorolac [7].
| Peak location (wavenumber) | Intensity | Peak Assignment |
|---|---|---|
| 1002 cm−1 | very strong | Phenylalanine or a C–C aromatic ring stretching |
| 1282 cm−1 | medium | CH2 wagging vibrations |
| 1348 cm−1 | weak | An unassigned mode |
| 1432 cm−1 | strong | CH bond [ |
| 1472 cm−1 | medium | C=N stretching |
| 1524 cm−1 | medium | In-plane vibrations of the conjugated –C |
| 1568 cm−1 | very strong | COO− |
| 1586 cm−1 | strong | NH2 deformation [ |
| 1602 cm−1 | medium | Phenylalanine or a C |
Fig. 2Raman spectrum of a pig eye soaked in a 5% ketorolac solution obtained by Jena lens. (a) Fingerprint spectrum, obtained using 60 seconds and averaged for 3 frames. (b) High-wavenumber spectrum, obtained using 60 seconds and averaged for 3 frames. No correction has been applied on the spectra.
Fig. 3In vivo Raman spectrum of the right eye of a rabbit with different integration times, averaged for 2 frames. (a) Shows the graph for 10 seconds, (b) 15 seconds, and (c) 30 seconds.
In vivo integration time of the Raman measurements of the rabbits.
| No. | Name | Day 0 | Day 7 | Day 14 | Day 21 | Day 28 |
|---|---|---|---|---|---|---|
| 1 | PLAC | x | 10 s | 15s | 15s | 30s |
| 2 | PLBT | 10s | x | 15s | 15s | 30s |
| 3 | PKXF | 10s | 10s | 15s | 15s | 30s |
| 4 | PKYJ | 10s | 10s | 15s | 15s | 30s |
| 5 | PNRS | 30s | 30s | 30s | 30s | 30s |
| 6 | PNPH | 30s | x | |||
| 7 | PNPJ | 30s | 30s | 30s | 30s | 30s |
| 8 | PNLJ | 30s | 30s | 30s | 30s | 30s |
| 9 | POLI | 30s | x | |||
| 10 | POBS | 30s | 30s | 30s | 30s | 30s |
| 11 | PPDI | 30s | 30s | 30s | 30s | 30s |
| 12 | POHI | 30s | 30s | 30s | 30s | 30s |
Integration time is shown in seconds, ‘x’ represents a failed measurement or no data. 2 frames per measurement were used.
Fig. 4Laser focus positioning in a cuvette filled with PBS (pH 7.4) using the high wavenumber spectrum.
Fig. 5Raman spectrum of aqueous humor samples from, (a) a 0.5% ketorolac submerged pig eye (3 frames of 60 seconds), and (b) from a rabbit eye (3 frames of 60 seconds on pkxf samples).
Fig. 6Holder for enucleated eyes. (a) shows an empty holder, (b) shows a holder with a pig eye, and (c) shows the empty holder on an adjustable lens mount.
Fig. 7In vitro and in vivo settings of the Raman system. (a) The set-up is for in vitro pig eye measurements by a Jena lens. (A) laser; (B) Raman module, with (C) 25 μm pinhole; (D) collimation f80 lens; (E) objective (Jena lens); (F) pig eye; (G) computer. (b) The set-up is for in vitro pig eye and in vivo rabbit measurements, a Gonio lens in combination with an f60 focus lens are used for focus in the anterior chamber of the animal eye. (A) laser; (B) Raman module, with (C) 25 μm pinhole; (D) collimation f80 lens; (E) f60 lens; (F) a Gonio (one-mirror) lens; (G) pig eye (in vitro) or rabbit eye (in vivo); (H) computer. Arrows indicate direction of excitation laser light and backscattered Raman light.
Fig. 8In vitro settings of the Raman system with a cuvette. (A) laser; (B) Raman module, with (C) 25μm pinhole; (D) collimation f80 lens; (E) focusing f80 lens (F) samples with in cuvette; (G) computer. Arrows indicate direction of excitation laser light and backscattered Raman light.
Specifications Table
| Subject | Pharmacology, Toxicology and Pharmaceutics (General) |
| Specific subject area | Raman spectroscopy of pharmaceutical compounds detection. |
| Type of data | Figures |
| How data were acquired | Raman spectra were recorded with a high-performance Raman module model 2500, River Diagnostics®, Rotterdam, the Netherlands. |
| Data format | Raw unanalyzed Raman spectra |
| Parameters for data collection | A 785 nm, 26 mW continues diode laser (Innovative Photonic Solutions SM 785 nm), and a 671 nm, 14 mW continues diode laser (Laser Quantum Ignis 671 and SMD 6000) were used to excite the samples. Raman spectra were collected with 60 seconds exposure time and 3 frames, and 30 seconds exposure time with 2 frames, for the |
| Description of data collection | |
| Data source location | Maastricht University, Maastricht, The Netherlands |
| Data accessibility | Data are supplied with the article |
| Related research article | Christian J.F. Bertens, Shuo Zhang, Roel J. Erckens, Frank J.H.M. van den Biggelaar, Tos T.J.M. Berendschot, Carroll A.B. Webers, Rudy M.M.A. Nuijts, Marlies Gijs. Confocal Raman spectroscopy: evaluation of a non-invasive technique for the detection of topically applied ketorolac tromethamine |
The dataset could be used for further composition analysis of the aqueous humor and for future pharmaceutical research, to increase sensitivity of Raman systems. The dataset can be useful for researchers who are interested in the aqueous humor composition, ocular pharmaceutics, Raman spectroscopy, and software engineers. Alternative processing methods could be applied to exact other compounds in the aqueous humor or to enhance signals. This dataset offers a large cohort of animals measured on both eyes, 5 times. |