Literature DB >> 31714018

Reverse-transcription recombinase-aided amplification assay for H7 subtype avian influenza virus.

Suchun Wang1, Baoxu Huang1, Xuejun Ma2, Ping Liu1, Yang Wang3, Xiaoguang Zhang2, Lin Zhu1, Qingying Fan3, Yawei Sun3, Kaicheng Wang1.   

Abstract

H7 subtype avian influenza virus infection is an emerging zoonosis in some Asian countries and an important avian disease worldwide. A rapid and simple test is needed to confirm infection in suspected cases during disease outbreaks. In this study, we developed a reverse-transcription recombinase-aided amplification assay for the detection of H7 subtype avian influenza virus. Assays were performed at a single temperature (39°C), and the results were obtained within 20 min. The assay showed no cross-detection with Newcastle disease virus or infectious bronchitis virus, which are the other main respiratory viruses affecting birds. The analytical sensitivity was 102 RNA copies per reaction at a 95% probability level according to probit regression analysis, with 100% specificity. Compared with published reverse-transcription quantitative real-time polymerase chain reaction assays, the κ value of the reverse-transcription recombinase-aided amplification assay in 342 avian clinical samples was 0.988 (p < .001). The sensitivity for avian clinical sample detection was 100% (95%CI, 90.40%-100%), and the specificity was 99.96% (95%CI, 97.83%-99.98%). These results indicated that our reverse-transcription recombinase-aided amplification assay may be a valuable tool for detecting avian influenza H7 subtype virus.
© 2019 Blackwell Verlag GmbH.

Entities:  

Keywords:  H7 subtype; avian influenza; reverse-transcription recombinase-aided amplification assay

Year:  2019        PMID: 31714018     DOI: 10.1111/tbed.13411

Source DB:  PubMed          Journal:  Transbound Emerg Dis        ISSN: 1865-1674            Impact factor:   5.005


  2 in total

1.  A recombinase polymerase amplification-based assay for rapid detection of Chlamydia psittaci.

Authors:  Yanling Pang; Feng Cong; Xinheng Zhang; Hongxin Li; Yung-Fu Chang; Qingmei Xie; Wencheng Lin
Journal:  Poult Sci       Date:  2020-11-28       Impact factor: 3.352

Review 2.  Trends in MERS-CoV, SARS-CoV, and SARS-CoV-2 (COVID-19) Diagnosis Strategies: A Patent Review.

Authors:  José Adão Carvalho Nascimento Junior; Anamaria Mendonça Santos; Ana Maria Santos Oliveira; Adriana Gibara Guimarães; Lucindo José Quintans-Júnior; Henrique Douglas Melo Coutinho; Natália Martins; Lysandro Pinto Borges; Mairim Russo Serafini
Journal:  Front Public Health       Date:  2020-10-27
  2 in total

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