Literature DB >> 31711962

Mobile Loops and Electrostatic Interactions Maintain the Flexible Tail Tube of Bacteriophage Lambda.

Patricia L Campbell1, Robert L Duda2, Jamie Nassur3, James F Conway4, Alexis Huet1.   

Abstract

The long flexible tail tube of bacteriophage lambda connects its capsid to the tail tip. On n class="Disease">infection, a DNA ejection signal is passed from the tip, along the tube to the capsid that triggers passage of the DNA down the tube and into the host bacterium. The tail tube is built from repeating units of the major tail protein, gpV, which has two distinctive domains. Its N-terminal domain has the same fold as proteins that form the rigid inner tubes of contractile tail phages, such as T4, and its C-terminal domain adopt an Ig-like fold of unknown function. We determined structures of the lambda tail tube in free tails and in virions before and after DNA ejection using cryoelectron microscopy. Modeling of the density maps reveals how electrostatic interactions and a mobile loop participate in assembly and also impart flexibility to the tube while maintaining its integrity. We also demonstrate how a common protein fold produces rigid tubes in some phages but flexible tubes in others.
Copyright © 2019 Elsevier Ltd. All rights reserved.

Entities:  

Keywords:  Bacteriophage; Cryoelectron microscopy; Helical; Siphoviridae; Tail

Mesh:

Substances:

Year:  2019        PMID: 31711962      PMCID: PMC7575002          DOI: 10.1016/j.jmb.2019.10.031

Source DB:  PubMed          Journal:  J Mol Biol        ISSN: 0022-2836            Impact factor:   5.469


  35 in total

1.  Flexible fitting of atomic structures into electron microscopy maps using molecular dynamics.

Authors:  Leonardo G Trabuco; Elizabeth Villa; Kakoli Mitra; Joachim Frank; Klaus Schulten
Journal:  Structure       Date:  2008-05       Impact factor: 5.006

Review 2.  Molecular assembly and structure of the bacteriophage T4 tail.

Authors:  Fumio Arisaka; Moh Lan Yap; Shuji Kanamaru; Michael G Rossmann
Journal:  Biophys Rev       Date:  2016-11-05

3.  Atomic structures of a bactericidal contractile nanotube in its pre- and postcontraction states.

Authors:  Peng Ge; Dean Scholl; Petr G Leiman; Xuekui Yu; Jeff F Miller; Z Hong Zhou
Journal:  Nat Struct Mol Biol       Date:  2015-03-30       Impact factor: 15.369

4.  Genetic control of bacteriophage T4 baseplate morphogenesis. III. Formation of the central plug and overall assembly pathway.

Authors:  Y Kikuchi; J King
Journal:  J Mol Biol       Date:  1975-12-25       Impact factor: 5.469

5.  Length determination in bacteriophage lambda tails.

Authors:  I Katsura; R W Hendrix
Journal:  Cell       Date:  1984-12       Impact factor: 41.582

6.  A balanced ratio of proteins from gene G and frameshift-extended gene GT is required for phage lambda tail assembly.

Authors:  Jun Xu; Roger W Hendrix; Robert L Duda
Journal:  J Mol Biol       Date:  2013-07-12       Impact factor: 5.469

7.  Features and development of Coot.

Authors:  P Emsley; B Lohkamp; W G Scott; K Cowtan
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2010-03-24

8.  Chaperone-protein interactions that mediate assembly of the bacteriophage lambda tail to the correct length.

Authors:  Jun Xu; Roger W Hendrix; Robert L Duda
Journal:  J Mol Biol       Date:  2013-07-30       Impact factor: 5.469

Review 9.  Morphogenesis of the T4 tail and tail fibers.

Authors:  Petr G Leiman; Fumio Arisaka; Mark J van Raaij; Victor A Kostyuchenko; Anastasia A Aksyuk; Shuji Kanamaru; Michael G Rossmann
Journal:  Virol J       Date:  2010-12-03       Impact factor: 4.099

10.  Structure of the type VI secretion system TssK-TssF-TssG baseplate subcomplex revealed by cryo-electron microscopy.

Authors:  Young-Jun Park; Kaitlyn D Lacourse; Christian Cambillau; Frank DiMaio; Joseph D Mougous; David Veesler
Journal:  Nat Commun       Date:  2018-12-19       Impact factor: 14.919

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  5 in total

1.  Architecture of the flexible tail tube of bacteriophage SPP1.

Authors:  Maximilian Zinke; Katrin A A Sachowsky; Carl Öster; Sophie Zinn-Justin; Raimond Ravelli; Gunnar F Schröder; Michael Habeck; Adam Lange
Journal:  Nat Commun       Date:  2020-11-13       Impact factor: 14.919

2.  Tall tails: cryo-electron microscopy of phage tail DNA ejection conduits.

Authors:  Joshua M Hardy; Rhys A Dunstan; Trevor Lithgow; Fasséli Coulibaly
Journal:  Biochem Soc Trans       Date:  2022-02-28       Impact factor: 4.919

3.  A novel multifunctional anti-PD-L1-CD16a-IL15 induces potent cancer cell killing in PD-L1-positive tumour cells.

Authors:  Yumei Li; Lingjun Wu; Yueying Liu; Siwen Ma; Biyi Huang; Xianjing Feng; Hui Wang
Journal:  Transl Oncol       Date:  2022-04-26       Impact factor: 4.803

4.  A Mycobacteriophage-Based Vaccine Platform: SARS-CoV-2 Antigen Expression and Display.

Authors:  Krista G Freeman; Katherine S Wetzel; Yu Zhang; Kira M Zack; Deborah Jacobs-Sera; Sara M Walters; Dominique J Barbeau; Anita K McElroy; John V Williams; Graham F Hatfull
Journal:  Microorganisms       Date:  2021-11-23

5.  Structural Studies of the Phage G Tail Demonstrate an Atypical Tail Contraction.

Authors:  Brenda González; Daoyi Li; Kunpeng Li; Elena T Wright; Stephen C Hardies; Julie A Thomas; Philip Serwer; Wen Jiang
Journal:  Viruses       Date:  2021-10-18       Impact factor: 5.048

  5 in total

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