| Literature DB >> 31708862 |
Silvia Minosse1, Francesco Garaci2,3, Alessio Martucci4, Simona Lanzafame1, Francesca Di Giuliano5, Eliseo Picchi5, Massimo Cesareo4, Raffaele Mancino4, Maria Guerrisi1, Chiara Adriana Pistolese5, Roberto Floris5, Carlo Nucci4, Nicola Toschi1,6.
Abstract
Background: Resting-state functional magnetic resonance imaging (rs-fMRI) is commonly employed to study changes in functional brain connectivity. The recent hypothesis of a brain involvement in primary open angle Glaucoma has sprung interest for neuroimaging studies in this classically ophthalmological pathology. Object: We explored a putative reorganization of functional brain networks in Glaucomatous patients, and evaluated the potential of functional network disruption indices as biomarkers of disease severity in terms of their relationship to clinical variables as well as select retinal layer thicknesses.Entities:
Keywords: functional brain networks; graph theoretical measures; neurodegenerative diseases; open angle glaucoma; resting-state functional magnetic resonance imaging (rs-fMRI)
Year: 2019 PMID: 31708862 PMCID: PMC6823877 DOI: 10.3389/fneur.2019.01134
Source DB: PubMed Journal: Front Neurol ISSN: 1664-2295 Impact factor: 4.003
Figure 1Schematic illustration of workflow from data to association matrix and graph analysis.
Clinical characteristics of our study population.
| Group size | 19 | 16 |
| Age (years) | ||
| Mean (range) | 61.3 (50–72) | 60.8 (50–76) |
| Sex (male/female) | 8/11 | 11/5 |
| IOP in treatment | ||
| Mean (range) | 15.89 (12–19) | 15.44 (12–18) |
| Disease stage | ||
| I | 9 | – |
| II | 2 | – |
| III | 4 | – |
| IV | 1 | – |
| V | 3 | – |
IOP, Intraocular pressure.
Figure 2Example of calculation of the disruption index k for a single patient compared to control group. Subject A represents a healthy control patient; subject B represents a Glaucoma patient.
Effect sizes (subject-wise disruption indices k) and regression slopes (group-wise disruption indices k).
| Degree | 0.44 | 0.004 | −0.32 | <0.001 |
| Betweenness centrality | 0.46 | 0.004 | −0.38 | <0.001 |
| Local efficiency | 0.66 | <0.001 | −0.65 | <0.001 |
| Clustering coefficient | 0.69 | <0.001 | −0.72 | <0.001 |
| Spectral centrality measure | 0.52 | 0.006 | −0.37 | <0.001 |
Effect size (second column from left): difference between the median values of the subject wise disruption indices along with p-values resulting from Mann–Whitney-U-tests (third column). Group-wise disruption indices k (fourth column from left) along with regression p-values (right column).
Figure 3Calculation of group-wise disruption index (left) and group-wise differences in subject-wise disruption index k when comparing Glaucoma patients to healthy controls (right) in all local graph measures. *p < 0.05, **p < 0.001.
Figure 4Differences in regions classified as hub in control vs. Glaucoma patients. The blue hubs “appear” and the red hubs “disappear” in Glaucoma patient as compared to controls. IOG.R, right inferior occipital; ANG.R, right angular gyrus; ITG.R, right inferior temporal gyrus; CRBL7b.L, left lobule VIIB of cerebellar hemisphere; CRBL9.L, left lobule IX of cerebellar hemisphere.
Results of linear regressions of disruption indices index k against clinical parameters.
| k Degree | + | 0.059 | 0.129 | + | 0.207 | 0.023* | + | 0.104 | 0.073 |
| k Betweenness centrality | + | 0.040 | 0.129 | + | 0.221 | 0.018* | + | 0.122 | 0.047* |
| k Local efficiency | + | 0.718 | 0.002* | + | 1.140 | <0.001* | + | 0.993 | 0.001* |
| k Clustering coefficient | + | 0.136 | 0.038* | + | 0.657 | <0.001* | + | 0.454 | 0.002* |
| k Spectral centrality measure | + | 0.060 | 0.108 | + | 0.192 | 0.023* | + | 0.099 | 0.065 |
VFI, Visual Field Index; RNFL, Retinal Nerve Fiber Layer; Macula GCL, Macula Ganglion Cell Layer; s, sign of association; f2, Cohen's f2 (effect size); p, corrected significance level (FDR across 15 comparisons, alpha = 0.05); the asterisk
indicates statistically significant correlation (p < 0.05).
Results of linear regressions of local graph-theoretical measures against clinical parameters.
| R parahippocampal gyrus | C | + | 0.193 | 0.022* | + | 0.171 | 0.023* | + | 0.239 | 0.019* |
| R transverse temporal gyrus | Deg | + | 0.142 | 0.048* | ns | + | 0.206 | 0.022* | ||
| El | + | 0.118 | 0.046* | ns | ns | |||||
| v | + | 0.158 | 0.046* | + | 0.139 | 0.048* | + | 0.277 | 0.014* | |
| Lobule X of Vermis | C | + | 0.208 | 0.049* | ns | ns | ||||
Abbreviations as in .
Discrimination performance for global graph-theoretical metrics and disruption index for differentiating Glaucoma patients from healthy controls.
| k Clustering coefficient | 0.911 | 100 | 78.95 | 80.00 | 100 |
| k Local efficiency | 0.885 | 87.50 | 78.95 | 77.78 | 88.24 |
| k Degree | 0.786 | 81.25 | 68.42 | 68.42 | 81.25 |
| k Betweenness centrality | 0.786 | 68.75 | 89.47 | 84.62 | 77.27 |
| k Spectral measure of centrality | 0.773 | 81.25 | 68.42 | 68.42 | 81.25 |
| Betweenness centrality | 0.582 | 87.50 | 42.11 | 56.00 | 80.00 |
| Transitivity | 0.549 | 62.50 | 52.63 | 52.63 | 62.50 |
| Modularity | 0.530 | 62.50 | 57.89 | 55.56 | 64.71 |
| Clustering coefficient | 0.520 | 87.50 | 36.84 | 53.85 | 77.78 |
| Global efficiency | 0.500 | 56.25 | 57.89 | 52.94 | 61.11 |
| Degree | 0.490 | 56.25 | 47.37 | 47.37 | 56.25 |
| Assortativity | 0.470 | 56.25 | 47.37 | 47.37 | 56.25 |
| Eigenvector centrality | 0.352 | 56.25 | 36.84 | 42.86 | 50.00 |
k, disruption index; AUC, area under the receiver operating characteristic curve; Sens, sensitivity; Spec, specificity; PPV, positive predicted value; NPV, negative predicted value. AUC are ordered from high to low, top-down.
Figure 5Receiver operation characteristic curves of k in the case where i = (clustering coefficient, local efficiency, degree, betweenness centrality, and spectral measure of centrality) in the differentiation task between Glaucoma patients and healthy controls.
Discrimination performance for local graph-theoretical metrics for differentiating Glaucoma patients from healthy controls (top 25).
| L globus pallidus | BC | 0.719 | 81.25 | 63.16 | 65.00 | 80.00 |
| R parahippocampal gyrus | BC | 0.712 | 68.75 | 73.68 | 68.75 | 73.68 |
| L paracentral lobule | El | 0.704 | 68.75 | 73.68 | 68.75 | 73.68 |
| L supplementary motor area | SmC | 0.701 | 81.25 | 63.16 | 65.00 | 80.00 |
| L precuneus | BC | 0.699 | 68.75 | 63.16 | 61.11 | 70.59 |
| R middle frontal gyrus | SmC | 0.697 | 75.00 | 78.95 | 75.00 | 78.95 |
| R cuneus | El | 0.697 | 62.50 | 89.47 | 83.33 | 73.91 |
| L superior occipital gyrus | C | 0.697 | 68.75 | 63.16 | 61.11 | 70.59 |
| Rsupramarginal gyrus | El | 0.694 | 62.50 | 73.68 | 66.67 | 70.00 |
| L globus pallidus | SmC | 0.691 | 68.75 | 68.42 | 64.71 | 72.22 |
| L supplementary motor area | Deg | 0.688 | 62.50 | 78.95 | 71.43 | 71.43 |
| R parahippocampal gyrus | Deg | 0.688 | 68.75 | 63.16 | 61.11 | 70.59 |
| R supramarginal gyrus | Deg | 0.688 | 56.25 | 68.42 | 60.00 | 65.00 |
| R supplementary motor area | C | 0.686 | 81.25 | 68.42 | 68.42 | 81.25 |
| L lobule VI of cerebellar hemisphere | BC | 0.684 | 68.75 | 63.16 | 61.11 | 70.59 |
| R caudate nucleus | BC | 0.679 | 75.00 | 68.42 | 66.67 | 76.47 |
| L olfactory cortex | C | 0.676 | 68.75 | 73.68 | 68.75 | 73.68 |
| R lobule IV, V of cerebellar hemisphere | BC | 0.676 | 56.25 | 84.21 | 75.00 | 69.57 |
| R superior occipital gyrus | C | 0.674 | 68.75 | 68.42 | 64.71 | 72.22 |
| L inferior occipital | Deg | 0.674 | 62.50 | 78.95 | 71.43 | 71.43 |
| L inferior occipital | El | 0.674 | 81.25 | 57.89 | 61.90 | 78.57 |
| R supramarginal gyrus | BC | 0.674 | 68.75 | 63.16 | 61.11 | 70.59 |
| L transverse temporal gyrus | El | 0.674 | 56.25 | 73.68 | 64.29 | 66.67 |
| R superior parietal lobule | SmC | 0.671 | 68.75 | 73.68 | 68.75 | 73.68 |
| L globus pallidus | Deg | 0.671 | 81.25 | 63.16 | 65.00 | 80.00 |
Abbreviations as in .