| Literature DB >> 31703357 |
Ekaterina M Stakhneva1, Irina A Meshcheryakova2, Evgeny A Demidov2, Konstantin V Starostin2, Evgeny V Sadovski1, Sergey E Peltek2, Michael I Voevoda1, Alexander M Chernyavskii3, Alexander M Volkov3, Yuliya I Ragino1.
Abstract
BACKGROUND: To study the changes in protein composition of atherosclerotic plaques at different stages of their development in coronary atherosclerosis using proteomics.Entities:
Keywords: atherosclerosis; atherosclerotic plaque; mass spectrometry; proteomics; tropomyosin
Year: 2019 PMID: 31703357 PMCID: PMC6963888 DOI: 10.3390/diagnostics9040177
Source DB: PubMed Journal: Diagnostics (Basel) ISSN: 2075-4418
Mass-spectrometric identification of proteins in the pools of homogenates of atherosclerotic plaques.
| № | ID (NCBI) | Protein Name | pI/Mass (Da) | Sc % | Score |
|---|---|---|---|---|---|
| 1 | ALBU_HUMAN | Serum albumin | 5.92/71317 | 21 | 97 |
| 2 | ALBU_HUMAN | Serum albumin | 5.92/71317 | 23 | 112 |
| 3 | ALBU_HUMAN | Serum albumin | 5.92/71317 | 33 | 185 |
| 4 | VIME_HUMAN | Vimentin | 5.06/53676 | 50 | 252 |
| 5 | VIME_HUMAN | Vimentin | 5.06/53676 | 60 | 299 |
| 6 | VIME_HUMAN | Vimentin | 5.06/53676 | 56 | 189 |
| 7 | TBB4B_HUMAN | Tubulin β -4B chain | 4.79/50255 | 21 | 70 |
| TBB2A_HUMAN | Tubulin β -2A chain | 4.78/50274 | 19 | 58 | |
| TBB2B_HUMAN | Tubulin β -2B chain | 4.78/50377 | 19 | 58 | |
| TBB5_HUMAN | Tubulin β chain | 4.78/50095 | 17 | 57 | |
| 8 | ACTC_HUMAN | Actin, α cardiac muscle 1 | 5.23/42334 | 50 | 125 |
| ACTA_HUMAN | Actin, aortic smooth muscle | 5.23/42381 | 50 | 125 | |
| 9 | ACTC_HUMAN | Actin, α cardiac muscle 1 | 5.23/42334 | 44 | 127 |
| ACTA_HUMAN | Actin, aortic smooth muscle | 5.23/42381 | 26 | 85 | |
| 10 | ACTC_HUMAN | Actin, α cardiac muscle 1 | 5.23/42334 | 55 | 128 |
| ACTA_HUMAN | Actin, aortic smooth muscle | 5.23/42381 | 55 | 128 | |
| 11 | ACTB_HUMAN | Actin, cytoplasmic 1 | 5.29/42052 | 61 | 157 |
| ACTG_HUMAN | Actin, cytoplasmic 2 | 5.29/42108 | 61 | 157 | |
| 12 | FIBB_HUMAN | Fibrinogen β chain | 8.54/56577 | 21 | 94 |
| 13 | FIBB_HUMAN | Fibrinogen β chain | 8.54/56577 | 35 | 158 |
| 14 | FIBB_HUMAN | Fibrinogen β chain | 8.54/56577 | 42 | 191 |
| 15 | TPM2_HUMAN | Tropomyosin β chain | 4.66/32945 | 38 | 117 |
| 16 | MFAP4_HUMAN | Microfibril-associated glycoprotein 4 | 5.38/28972 | 24 | 80 |
| 17 | MFAP4_HUMAN | Microfibril-associated glycoprotein 4 | 5.38/28972 | 24 | 80 |
| 18 | MFAP4_HUMAN | Microfibril-associated glycoprotein 4 | 5.38/28972 | 22 | 57 |
| 19 | MIME_HUMAN | Mimecan | 5.46/34243 | 46 | 180 |
| 20 | ANXA5_HUMAN | Annexin A5 | 4.94/35971 | 58 | 175 |
| 21 | K1C9_HUMAN | Keratin, type I cytoskeletal 9 | 5.14/62255 | 32 | 79 |
| 22 | SAMP_HUMAN | Serum amyloid P-component | 6.1/25485 | 28 | 80 |
| 23 | SAMP_HUMAN | Serum amyloid P-component | 6.1/25485 | 33 | 77 |
Note: sc: sequence coverage; score: Mascot statistical score.
Comparison of the amount of proteins in the pools of homogenates of atherosclerotic plaques (maximum in bold).
| Number | Id (NCBI) | Protein Name | Amount of Protein, Relative Units of Intensity, *105 | ||
|---|---|---|---|---|---|
| StL | StF | Ns | |||
| 1–3 | ALBU_HUMAN | Serum albumin | 4.3 | 12.3 |
|
| 4–6 | VIME_HUMAN | Vimentin |
| 2.4 | 4.1 |
| 7 | TBB5_HUMAN | Tubulin β chain |
| 1.4 | 1.1 |
| 8–10 | ACTC_HUMAN | Actin, α cardiac muscle |
| 29.2 | 33.4 |
| 11 | ACTB_HUMAN | Actin, cytoplasmic |
| 18.4 | 37.7 |
| 12–14 | FIBB_HUMAN | Fibrinogen β chain | 1.3 |
| 2.9 |
| 15 | TPM2_HUMAN | Tropomyosin βchain |
| 2.0 | 2.0 |
| 16–18 | MFAP4_HUMAN | Microfibril-associated glycoprotein 4 |
| 4.5 | 3.2 |
| 19 | MIME_HUMAN | Mimecan | 26.5 |
| 55.4 |
| 20 | ANXA5_HUMAN | Annexin A5 |
| 0.7 | 2.2 |
| 21 | K2C1_HUMAN | Keratin, type I cytoskeletal 9 |
| - | 1.7 |
| 22–23 | SAMP_HUMAN | Serum amyloid P-component |
| 5.9 | 22.2 |
Note: StL: stable atherosclerotic plaques at the stage of lipidosis and fibrosis (1); StF: stable atherosclerotic plaques at the stage of fibrosis and calcification (2); Ns: unstable atherosclerotic plaques of the necrotic-dystrophic type (3). *: The unit of measure provided by the PDQuest program.