Literature DB >> 31699836

Biobanking and cryopreservation of human lung explants for omic analysis.

Sarah G Chu1,2, Sergio Poli De Frias1,2, Yuichi Sakairi1, Rachel S Kelly3, Robert Chase3, Kazuhisa Konishi1, Ashley Blau4, Ellen Tsai4, Konstantin Tsoyi1, Robert F Padera5, Lynette M Sholl5, Hilary J Goldberg1, Hari R Mallidi6, Phillip C Camp6, Souheil Y El-Chemaly1, Mark A Perrella1,7, Augustine M K Choi8, George R Washko1, Benjamin A Raby1,3,9, Ivan O Rosas10.   

Abstract

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Year:  2020        PMID: 31699836      PMCID: PMC7066468          DOI: 10.1183/13993003.01635-2018

Source DB:  PubMed          Journal:  Eur Respir J        ISSN: 0903-1936            Impact factor:   33.795


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  25 in total

1.  Type 2 alveolar cells are stem cells in adult lung.

Authors:  Christina E Barkauskas; Michael J Cronce; Craig R Rackley; Emily J Bowie; Douglas R Keene; Barry R Stripp; Scott H Randell; Paul W Noble; Brigid L M Hogan
Journal:  J Clin Invest       Date:  2013-06-10       Impact factor: 14.808

Review 2.  Cell cycle kinetics in the alveolar epithelium.

Authors:  B D Uhal
Journal:  Am J Physiol       Date:  1997-06

Review 3.  Nonresolving fibrotic disorders: idiopathic pulmonary fibrosis as a paradigm of impaired tissue regeneration.

Authors:  Louise Hecker; Victor J Thannickal
Journal:  Am J Med Sci       Date:  2011-06       Impact factor: 2.378

4.  A novel method for isolating individual cellular components from the adult human distal lung.

Authors:  Naoya Fujino; Hiroshi Kubo; Chiharu Ota; Takaya Suzuki; Satoshi Suzuki; Mitsuhiro Yamada; Toru Takahashi; Mei He; Takashi Suzuki; Takashi Kondo; Mutsuo Yamaya
Journal:  Am J Respir Cell Mol Biol       Date:  2011-10-27       Impact factor: 6.914

5.  Differentiation of Club Cells to Alveolar Epithelial Cells In Vitro.

Authors:  Dahai Zheng; Boon-Seng Soh; Lu Yin; Guangan Hu; Qingfeng Chen; Hyungwon Choi; Jongyoon Han; Vincent T K Chow; Jianzhu Chen
Journal:  Sci Rep       Date:  2017-01-27       Impact factor: 4.379

6.  Single-cell transcriptome conservation in cryopreserved cells and tissues.

Authors:  Amy Guillaumet-Adkins; Gustavo Rodríguez-Esteban; Elisabetta Mereu; Maria Mendez-Lago; Diego A Jaitin; Alberto Villanueva; August Vidal; Alex Martinez-Marti; Enriqueta Felip; Ana Vivancos; Hadas Keren-Shaul; Simon Heath; Marta Gut; Ido Amit; Ivo Gut; Holger Heyn
Journal:  Genome Biol       Date:  2017-03-01       Impact factor: 13.583

7.  Cellular senescence mediates fibrotic pulmonary disease.

Authors:  Marissa J Schafer; Thomas A White; Koji Iijima; Andrew J Haak; Giovanni Ligresti; Elizabeth J Atkinson; Ann L Oberg; Jodie Birch; Hanna Salmonowicz; Yi Zhu; Daniel L Mazula; Robert W Brooks; Heike Fuhrmann-Stroissnigg; Tamar Pirtskhalava; Y S Prakash; Tamara Tchkonia; Paul D Robbins; Marie Christine Aubry; João F Passos; James L Kirkland; Daniel J Tschumperlin; Hirohito Kita; Nathan K LeBrasseur
Journal:  Nat Commun       Date:  2017-02-23       Impact factor: 14.919

Review 8.  Impact of Transcriptomics on Our Understanding of Pulmonary Fibrosis.

Authors:  Milica Vukmirovic; Naftali Kaminski
Journal:  Front Med (Lausanne)       Date:  2018-04-04

9.  The use of exome capture RNA-seq for highly degraded RNA with application to clinical cancer sequencing.

Authors:  Marcin Cieslik; Rashmi Chugh; Yi-Mi Wu; Ming Wu; Christine Brennan; Robert Lonigro; Fengyun Su; Rui Wang; Javed Siddiqui; Rohit Mehra; Xuhong Cao; David Lucas; Arul M Chinnaiyan; Dan Robinson
Journal:  Genome Res       Date:  2015-08-07       Impact factor: 9.043

Review 10.  Advanced Applications of RNA Sequencing and Challenges.

Authors:  Yixing Han; Shouguo Gao; Kathrin Muegge; Wei Zhang; Bing Zhou
Journal:  Bioinform Biol Insights       Date:  2015-11-15
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  4 in total

1.  Versatile workflow for cell type-resolved transcriptional and epigenetic profiles from cryopreserved human lung.

Authors:  Maria Llamazares-Prada; Elisa Espinet; Vedrana Mijošek; Uwe Schwartz; Pavlo Lutsik; Raluca Tamas; Mandy Richter; Annika Behrendt; Stephanie T Pohl; Naja P Benz; Thomas Muley; Arne Warth; Claus Peter Heußel; Hauke Winter; Jonathan J M Landry; Felix Jf Herth; Tinne Cj Mertens; Harry Karmouty-Quintana; Ina Koch; Vladimir Benes; Jan O Korbel; Sebastian M Waszak; Andreas Trumpp; David M Wyatt; Heiko F Stahl; Christoph Plass; Renata Z Jurkowska
Journal:  JCI Insight       Date:  2021-03-22

2.  Syndecan-2 regulates PAD2 to exert antifibrotic effects on RA-ILD fibroblasts.

Authors:  Konstantin Tsoyi; Anthony J Esposito; Bo Sun; Ryan G Bowen; Kevin Xiong; Fernando Poli; Rafael Cardenas; Sarah G Chu; Xiaoliang Liang; Stefan W Ryter; Christine Beeton; Tracy J Doyle; Matthew J Robertson; Lindsay J Celada; Freddy Romero; Souheil Y El-Chemaly; Mark A Perrella; I-Cheng Ho; Ivan O Rosas
Journal:  Sci Rep       Date:  2022-02-18       Impact factor: 4.996

3.  Single-cell RNA-seq reveals ectopic and aberrant lung-resident cell populations in idiopathic pulmonary fibrosis.

Authors:  Taylor S Adams; Jonas C Schupp; Sergio Poli; Ehab A Ayaub; Nir Neumark; Farida Ahangari; Sarah G Chu; Benjamin A Raby; Giuseppe DeIuliis; Michael Januszyk; Qiaonan Duan; Heather A Arnett; Asim Siddiqui; George R Washko; Robert Homer; Xiting Yan; Ivan O Rosas; Naftali Kaminski
Journal:  Sci Adv       Date:  2020-07-08       Impact factor: 14.136

4.  Hypertension, the renin-angiotensin system, and the risk of lower respiratory tract infections and lung injury: implications for COVID-19.

Authors:  Reinhold Kreutz; Engi Abd El-Hady Algharably; Michel Azizi; Piotr Dobrowolski; Tomasz Guzik; Andrzej Januszewicz; Alexandre Persu; Aleksander Prejbisz; Thomas Günther Riemer; Ji-Guang Wang; Michel Burnier
Journal:  Cardiovasc Res       Date:  2020-08-01       Impact factor: 10.787

  4 in total

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