Literature DB >> 31696163

Active Appearance Model Induced Generative Adversarial Network for Controlled Data Augmentation.

Jianfei Liu1, Christine Shen1, Tao Liu1, Nancy Aguilera1, Johnny Tam1.   

Abstract

Data augmentation is an important strategy for enlarging training datasets in deep learning-based medical image analysis. This is because large, annotated medical datasets are not only difficult and costly to generate, but also quickly become obsolete due to rapid advances in imaging technology. Image-to-image conditional generative adversarial networks (C-GAN) provide a potential solution for data augmentation. However, annotations used as inputs to C-GAN are typically based only on shape information, which can result in undesirable intensity distributions in the resulting artificially-created images. In this paper, we introduce an active cell appearance model (ACAM) that can measure statistical distributions of shape and intensity and use this ACAM model to guide C-GAN to generate more realistic images, which we call A-GAN. A-GAN provides an effective means for conveying anisotropic intensity information to C-GAN. A-GAN incorporates a statistical model (ACAM) to determine how transformations are applied for data augmentation. Traditional approaches for data augmentation that are based on arbitrary transformations might lead to unrealistic shape variations in an augmented dataset that are not representative of real data. A-GAN is designed to ameliorate this. To validate the effectiveness of using A-GAN for data augmentation, we assessed its performance on cell analysis in adaptive optics retinal imaging, which is a rapidly-changing medical imaging modality. Compared to C-GAN, A-GAN achieved stability in fewer iterations. The cell detection and segmentation accuracy when assisted by A-GAN augmentation was higher than that achieved with C-GAN. These findings demonstrate the potential for A-GAN to substantially improve existing data augmentation methods in medical image analysis.

Entities:  

Keywords:  Active appearance model; Adaptive optics retinal imaging; Cell detection; Cell segmentation; Data augmentation; Generative adversarial network

Year:  2019        PMID: 31696163      PMCID: PMC6834374          DOI: 10.1007/978-3-030-32239-7_23

Source DB:  PubMed          Journal:  Med Image Comput Comput Assist Interv


  7 in total

1.  Cell Segmentation Using a Similarity Interface With a Multi-Task Convolutional Neural Network.

Authors:  Nisha Ramesh; Tolga Tasdizen
Journal:  IEEE J Biomed Health Inform       Date:  2018-12-07       Impact factor: 5.772

2.  Differential Data Augmentation Techniques for Medical Imaging Classification Tasks.

Authors:  Zeshan Hussain; Francisco Gimenez; Darvin Yi; Daniel Rubin
Journal:  AMIA Annu Symp Proc       Date:  2018-04-16

3.  Spine-GAN: Semantic segmentation of multiple spinal structures.

Authors:  Zhongyi Han; Benzheng Wei; Ashley Mercado; Stephanie Leung; Shuo Li
Journal:  Med Image Anal       Date:  2018-08-25       Impact factor: 8.545

4.  Generative Adversarial Network for Medical Images (MI-GAN).

Authors:  Talha Iqbal; Hazrat Ali
Journal:  J Med Syst       Date:  2018-10-12       Impact factor: 4.460

5.  Controlled Synthesis of Dermoscopic Images via a New Color Labeled Generative Style Transfer Network to Enhance Melanoma Segmentation.

Authors:  Yucong Chi; Lei Bi; Jinman Kim; Dagan Feng; Ashnil Kumar
Journal:  Annu Int Conf IEEE Eng Med Biol Soc       Date:  2018-07

6.  In vivo imaging of human cone photoreceptor inner segments.

Authors:  Drew Scoles; Yusufu N Sulai; Christopher S Langlo; Gerald A Fishman; Christine A Curcio; Joseph Carroll; Alfredo Dubra
Journal:  Invest Ophthalmol Vis Sci       Date:  2014-06-06       Impact factor: 4.799

7.  Adaptive optics ophthalmoscopy.

Authors:  Austin Roorda; Jacque L Duncan
Journal:  Annu Rev Vis Sci       Date:  2015-10-14       Impact factor: 6.422

  7 in total
  4 in total

1.  Graded Image Generation Using Stratified CycleGAN.

Authors:  Jianfei Liu; Joanne Li; Tao Liu; Johnny Tam
Journal:  Med Image Comput Comput Assist Interv       Date:  2020-09-29

2.  Automated Iterative Label Transfer Improves Segmentation of Noisy Cells in Adaptive Optics Retinal Images.

Authors:  Jianfei Liu; Nancy Aguilera; Tao Liu; Johnny Tam
Journal:  Deep Gener Model Data Augment Label Imperfections (2021)       Date:  2021-09-25

3.  Spatially Aware Dense-LinkNet Based Regression Improves Fluorescent Cell Detection in Adaptive Optics Ophthalmic Images.

Authors:  Jianfei Liu; Yoo-Jean Han; Tao Liu; Nancy Aguilera; Johnny Tam
Journal:  IEEE J Biomed Health Inform       Date:  2020-12-04       Impact factor: 5.772

4.  Active Cell Appearance Model Induced Generative Adversarial Networks for Annotation-Efficient Cell Segmentation and Identification on Adaptive Optics Retinal Images.

Authors:  Jianfei Liu; Christine Shen; Nancy Aguilera; Catherine Cukras; Robert B Hufnagel; Wadih M Zein; Tao Liu; Johnny Tam
Journal:  IEEE Trans Med Imaging       Date:  2021-09-30       Impact factor: 11.037

  4 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.