| Literature DB >> 31695381 |
Junxiao Miao1, Lu Liu1,2, Ci Yan1, Xiaotong Zhu1, Mengqi Fan1, Peitong Yu1, Keming Ji1, Yinglin Huang3, Yuan Wang3, Gang Zhu1.
Abstract
BACKGROUND: A large number of studies have shown a close relationship between ADORA2A and the pathological mechanism of schizophrenia. However, to our knowledge, there has been no studies examining the association between the ADORA2A gene and schizophrenia in Chinese Han population.Entities:
Keywords: ADORA2A; gene polymorphisms; schizophrenia
Year: 2019 PMID: 31695381 PMCID: PMC6718062 DOI: 10.2147/NDT.S205014
Source DB: PubMed Journal: Neuropsychiatr Dis Treat ISSN: 1176-6328 Impact factor: 2.570
Hardy-Weinberg equilibrium of ADORA2A single nucleotide polymorphisms (SNP) sites
| SNPs | group | Gene type (frequency) | χ2 | |
|---|---|---|---|---|
| rs5996696 | Control group | CC:5 (0.9%) | 0.452 | 0.461 |
| AC:79 (14.8%) | ||||
| AA:451 (84.3%) | ||||
| Case group | CC:3 (0.8%) | 0.076 | 0.783 | |
| AC:58 (14.7%) | ||||
| AA:334 (84.5%) | ||||
| rs2298383 | Control group | CC:93 (17.4%) | 4.073 | 0.044* |
| TC:286 (53.7%) | ||||
| TT:154 (28.9%) | ||||
| Case group | CC:105 (26.4%) | 0.641 | 0.432 | |
| TC:191 (48.0%) | ||||
| TT:102 (25.6%) |
Note: *P<0.05 (indicates statistical significance).
rs5996696A/C and rs2298383T/C genotype frequency distribution comparisons
| Groups | Genotype, n (%) | Models | Adjusted | Adjusted OR (95%CI) | |||
|---|---|---|---|---|---|---|---|
| AA | AC | CC | |||||
| rs5996696A/C | Control group | 451 (84.3) | 79 (14.8) | 5 (0.9) | Additive | 0.983 | 0.984 (0.230,4213) |
| Case group | 334 (84.5) | 58 (14.7) | 3 (0.8) | Dominant | 0.976 | 0.978 (0.229,4.178) | |
| Recessive | 0.899 | 0.977 (0.679,1.405) | |||||
| rs2298383T/C | Control group | 154 (28.9) | 286 (53.7) | 93 (17.4) | Additive | 0.005* | 1.712 (1.172,2.502) |
| Case group | 102 (25.6) | 191 (48.0) | 105 (26.4) | Dominant | 0.001* | 1.753 (1.273,2.415) | |
| Recessive | 0.366 | 0.872 (0.649,1.173) | |||||
Notes: Adjusted OR was obtained on logistic regression after controlling gender. Additive model: AA vs CC; Dominant model: AA/AC vs CC; Recessive model: CC/AC vs AA. *p<0.0083 (Bonferroni correction: a’=a/k, where a’ is the corrected significance level for multiple comparison, a is the significance level (0.05), and k is the number of independent significance tests (2*3=6), a’=0.05/6).
Figure 1Linkage disequilibrium of the two loci.
Haplotype distribution of the two single nucleotide polymorphisms between the case group and control group
| Haplotype | Total frequency | Case group-control group ratio | χ2 | |
|---|---|---|---|---|
| TA | 0.528 | 0.977:1.237 | 6.268 | 0.0123* |
| CA | 0.390 | 0.738:0.572 | 7.012 | 0.0081* |
| CC | 0.080 | 0.087:0.086 | 0.006 | 0.9365 |
Note: *P<0.05 (indicates statistical significance).