Literature DB >> 31694835

Organoid Cultures as Preclinical Models of Non-Small Cell Lung Cancer.

Ruoshi Shi1,2, Nikolina Radulovich1, Christine Ng1, Ni Liu1, Hirotsugu Notsuda1, Michael Cabanero1, Sebastiao N Martins-Filho1, Vibha Raghavan1, Quan Li1, Arvind Singh Mer1, Joshua C Rosen1,3, Ming Li1, Yu-Hui Wang1, Laura Tamblyn1, Nhu-An Pham1, Benjamin Haibe-Kains1,2,4,5,6, Geoffrey Liu1,2,7, Nadeem Moghal1,2, Ming-Sound Tsao8,2,3.   

Abstract

PURPOSE: Non-small cell lung cancer (NSCLC) is the most common cause of cancer-related deaths worldwide. There is an unmet need to develop novel clinically relevant models of NSCLC to accelerate identification of drug targets and our understanding of the disease. EXPERIMENTAL
DESIGN: Thirty surgically resected NSCLC primary patient tissue and 35 previously established patient-derived xenograft (PDX) models were processed for organoid culture establishment. Organoids were histologically and molecularly characterized by cytology and histology, exome sequencing, and RNA-sequencing analysis. Tumorigenicity was assessed through subcutaneous injection of organoids in NOD/SCID mice. Organoids were subjected to drug testing using EGFR, FGFR, and MEK-targeted therapies.
RESULTS: We have identified cell culture conditions favoring the establishment of short-term and long-term expansion of NSCLC organoids derived from primary lung patient and PDX tumor tissue. The NSCLC organoids recapitulated the histology of the patient and PDX tumor. They also retained tumorigenicity, as evidenced by cytologic features of malignancy, xenograft formation, preservation of mutations, copy number aberrations, and gene expression profiles between the organoid and matched parental tumor tissue by whole-exome and RNA sequencing. NSCLC organoid models also preserved the sensitivity of the matched parental tumor to targeted therapeutics, and could be used to validate or discover biomarker-drug combinations.
CONCLUSIONS: Our panel of NSCLC organoids closely recapitulates the genomics and biology of patient tumors, and is a potential platform for drug testing and biomarker validation. ©2019 American Association for Cancer Research.

Entities:  

Year:  2019        PMID: 31694835     DOI: 10.1158/1078-0432.CCR-19-1376

Source DB:  PubMed          Journal:  Clin Cancer Res        ISSN: 1078-0432            Impact factor:   12.531


  43 in total

1.  Drug screening and genome editing in human pancreatic cancer organoids identifies drug-gene interactions and candidates for off-label treatment.

Authors:  Christian K Hirt; Tijmen H Booij; Linda Grob; Patrik Simmler; Nora C Toussaint; David Keller; Doreen Taube; Vanessa Ludwig; Alexander Goryachkin; Chantal Pauli; Daniela Lenggenhager; Daniel J Stekhoven; Christian U Stirnimann; Katharina Endhardt; Femke Ringnalda; Lukas Villiger; Alexander Siebenhüner; Sofia Karkampouna; Marta De Menna; Janette Beshay; Hagen Klett; Marianna Kruithof-de Julio; Julia Schüler; Gerald Schwank
Journal:  Cell Genom       Date:  2022-02

2.  Smoke-induced SAV1 Gene Promoter Hypermethylation Disrupts YAP Negative Feedback and Promotes Malignant Progression of Non-small Cell Lung Cancer.

Authors:  Ting Liu; Wei Guo; Kai Luo; Lei Li; Jing Dong; Meijun Liu; Xingyuan Shi; Zhiyuan Wang; Jianlei Zhang; Jiang Yin; Ni Qiu; Minying Lu; Danyang Chen; Xiaoting Jia; Hao Liu; Yixue Gu; Yan Xiong; Guopei Zheng; Gang Xu; Zhimin He; Zhijie Zhang
Journal:  Int J Biol Sci       Date:  2022-07-11       Impact factor: 10.750

3.  Generation of Human Lung Organoid Cultures from Healthy and Tumor Tissue to Study Infectious Diseases.

Authors:  Lorena Salgueiro; Susann Kummer; Vera Sonntag-Buck; Anne Weiß; Marc A Schneider; Hans-Georg Kräusslich; Rocio Sotillo
Journal:  J Virol       Date:  2022-03-14       Impact factor: 6.549

Review 4.  Recent advances in preclinical models for lung squamous cell carcinoma.

Authors:  Yuanwang Pan; Han Han; Kristen E Labbe; Hua Zhang; Kwok-Kin Wong
Journal:  Oncogene       Date:  2021-03-11       Impact factor: 9.867

5.  Patient-derived tumor xenograft and organoid models established from resected pancreatic, duodenal and biliary cancers.

Authors:  Nhu-An Pham; Nikolina Radulovich; Emin Ibrahimov; Sebastiao N Martins-Filho; Quan Li; Melania Pintilie; Jessica Weiss; Vibha Raghavan; Michael Cabanero; Robert E Denroche; Julie M Wilson; Cristiane Metran-Nascente; Ayelet Borgida; Shawn Hutchinson; Anna Dodd; Michael Begora; Dianne Chadwick; Stefano Serra; Jennifer J Knox; Steven Gallinger; David W Hedley; Lakshmi Muthuswamy; Ming-Sound Tsao
Journal:  Sci Rep       Date:  2021-05-19       Impact factor: 4.379

Review 6.  Drug sensitivity prediction from cell line-based pharmacogenomics data: guidelines for developing machine learning models.

Authors:  Hossein Sharifi-Noghabi; Soheil Jahangiri-Tazehkand; Petr Smirnov; Casey Hon; Anthony Mammoliti; Sisira Kadambat Nair; Arvind Singh Mer; Martin Ester; Benjamin Haibe-Kains
Journal:  Brief Bioinform       Date:  2021-11-05       Impact factor: 13.994

Review 7.  Preclinical Models for Acquired Resistance to Third-Generation EGFR Inhibitors in NSCLC: Functional Studies and Drug Combinations Used to Overcome Resistance.

Authors:  Emna Mahfoudhi; Charles Ricordel; Gwendoline Lecuyer; Cécile Mouric; Hervé Lena; Rémy Pedeux
Journal:  Front Oncol       Date:  2022-04-07       Impact factor: 5.738

Review 8.  Organoid of ovarian cancer: genomic analysis and drug screening.

Authors:  H-D Liu; B-R Xia; M-Z Jin; G Lou
Journal:  Clin Transl Oncol       Date:  2020-01-14       Impact factor: 3.405

Review 9.  Patient-Derived Cancer Organoids for Precision Oncology Treatment.

Authors:  Mark N Pernik; Cylaina E Bird; Jeffrey I Traylor; Diana D Shi; Timothy E Richardson; Samuel K McBrayer; Kalil G Abdullah
Journal:  J Pers Med       Date:  2021-05-17

Review 10.  Mapping lung squamous cell carcinoma pathogenesis through in vitro and in vivo models.

Authors:  Sandra Gómez-López; Zoe E Whiteman; Sam M Janes
Journal:  Commun Biol       Date:  2021-08-05
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